Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
COL4A2P08572 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
COL4A2P08572 RNU6-946P-201ENST00000383878 107 ntBASIC1.18□□□□□ -2.22
COL4A2P08572 RNU6-166P-201ENST00000384371 107 ntBASIC1.18□□□□□ -2.22
COL4A2P08572 MIR598-201ENST00000384868 97 ntBASIC1.18□□□□□ -2.22
COL4A2P08572 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.18□□□□□ -2.22
COL4A2P08572 RPL23AP30-201ENST00000432419 501 ntBASIC1.18□□□□□ -2.22
COL4A2P08572 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.18□□□□□ -2.22
COL4A2P08572 AL512286.1-201ENST00000439244 400 ntBASIC1.18□□□□□ -2.22
COL4A2P08572 AL078601.1-201ENST00000444542 271 ntBASIC1.18□□□□□ -2.22
COL4A2P08572 AL606662.1-201ENST00000445763 553 ntBASIC1.18□□□□□ -2.22
COL4A2P08572 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.18□□□□□ -2.22
COL4A2P08572 CYP2C59P-201ENST00000457790 269 ntBASIC1.18□□□□□ -2.22
COL4A2P08572 AP001324.2-201ENST00000461163 319 ntBASIC1.18□□□□□ -2.22
COL4A2P08572 RPL7P43-201ENST00000478876 753 ntBASIC1.18□□□□□ -2.22
COL4A2P08572 WDR78-207ENST00000488333 613 ntTSL 3 BASIC1.18□□□□□ -2.22
COL4A2P08572 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.18□□□□□ -2.22
COL4A2P08572 RNU6-311P-201ENST00000516224 102 ntBASIC1.18□□□□□ -2.22
COL4A2P08572 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.18□□□□□ -2.22
COL4A2P08572 MTND4LP18-201ENST00000526864 291 ntBASIC1.18□□□□□ -2.22
COL4A2P08572 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.18□□□□□ -2.22
COL4A2P08572 AL157871.3-201ENST00000557231 293 ntBASIC1.18□□□□□ -2.22
COL4A2P08572 MIR4529-201ENST00000578110 78 ntBASIC1.18□□□□□ -2.22
COL4A2P08572 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.18□□□□□ -2.22
COL4A2P08572 U4atac.1-201ENST00000618345 95 ntBASIC1.18□□□□□ -2.22
COL4A2P08572 AC106754.1-201ENST00000562632 1513 ntBASIC1.17□□□□□ -2.22
COL4A2P08572 AL445523.1-201ENST00000451184 1362 ntBASIC1.17□□□□□ -2.22
COL4A2P08572 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
COL4A2P08572 MIR520E-201ENST00000384867 87 ntBASIC1.17□□□□□ -2.22
COL4A2P08572 SNORD115.1-201ENST00000391109 76 ntBASIC1.17□□□□□ -2.22
COL4A2P08572 AC127391.1-201ENST00000411737 98 ntBASIC1.17□□□□□ -2.22
COL4A2P08572 AL008987.1-201ENST00000415528 237 ntBASIC1.17□□□□□ -2.22
COL4A2P08572 AC114491.1-201ENST00000416095 246 ntBASIC1.17□□□□□ -2.22
COL4A2P08572 AC138623.1-201ENST00000418060 216 ntBASIC1.17□□□□□ -2.22
COL4A2P08572 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.17□□□□□ -2.22
COL4A2P08572 RPS27AP14-201ENST00000422868 454 ntBASIC1.17□□□□□ -2.22
COL4A2P08572 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.17□□□□□ -2.22
COL4A2P08572 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.17□□□□□ -2.22
COL4A2P08572 HMGN1P33-201ENST00000432945 451 ntBASIC1.17□□□□□ -2.22
COL4A2P08572 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.17□□□□□ -2.22
COL4A2P08572 AC118469.1-201ENST00000442943 488 ntBASIC1.17□□□□□ -2.22
COL4A2P08572 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.17□□□□□ -2.22
COL4A2P08572 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.17□□□□□ -2.22
COL4A2P08572 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.17□□□□□ -2.22
COL4A2P08572 RNU6-677P-201ENST00000516914 101 ntBASIC1.17□□□□□ -2.22
COL4A2P08572 SNORA31.19-201ENST00000517079 126 ntBASIC1.17□□□□□ -2.22
COL4A2P08572 RNU6-1315P-201ENST00000517187 99 ntBASIC1.17□□□□□ -2.22
COL4A2P08572 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.17□□□□□ -2.22
COL4A2P08572 CBX3P7-201ENST00000532876 502 ntBASIC1.17□□□□□ -2.22
COL4A2P08572 ADI1P3-201ENST00000549509 470 ntBASIC1.17□□□□□ -2.22
COL4A2P08572 AC091489.2-201ENST00000566263 604 ntBASIC1.17□□□□□ -2.22
COL4A2P08572 AC011712.1-201ENST00000588959 234 ntBASIC1.17□□□□□ -2.22
COL4A2P08572 AC078899.2-201ENST00000595282 212 ntBASIC1.17□□□□□ -2.22
COL4A2P08572 AL391646.1-201ENST00000603860 190 ntBASIC1.17□□□□□ -2.22
COL4A2P08572 AC018638.7-201ENST00000605836 1114 ntBASIC1.17□□□□□ -2.22
COL4A2P08572 AC092106.3-201ENST00000611308 722 ntBASIC1.17□□□□□ -2.22
COL4A2P08572 AL162373.1-201ENST00000620433 407 ntBASIC1.17□□□□□ -2.22
COL4A2P08572 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.17□□□□□ -2.22
COL4A2P08572 AC068787.1-201ENST00000623908 691 ntBASIC1.17□□□□□ -2.22
COL4A2P08572 MIR373-201ENST00000362273 69 ntBASIC1.16□□□□□ -2.22
COL4A2P08572 RNU1-148P-201ENST00000384472 162 ntBASIC1.16□□□□□ -2.22
COL4A2P08572 MIR518D-201ENST00000385014 87 ntBASIC1.16□□□□□ -2.22
COL4A2P08572 SNORA40.19-201ENST00000390846 128 ntBASIC1.16□□□□□ -2.22
COL4A2P08572 RNU2-39P-201ENST00000410604 198 ntBASIC1.16□□□□□ -2.22
COL4A2P08572 CYCSP33-201ENST00000414485 327 ntBASIC1.16□□□□□ -2.22
COL4A2P08572 AL627311.1-201ENST00000431514 115 ntBASIC1.16□□□□□ -2.22
COL4A2P08572 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.16□□□□□ -2.22
COL4A2P08572 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.16□□□□□ -2.22
COL4A2P08572 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.16□□□□□ -2.22
COL4A2P08572 MTND1P18-201ENST00000448191 573 ntBASIC1.16□□□□□ -2.22
COL4A2P08572 PSPHP1-201ENST00000450062 261 ntBASIC1.16□□□□□ -2.22
COL4A2P08572 KATNBL1P6-201ENST00000453433 915 ntBASIC1.16□□□□□ -2.22
COL4A2P08572 AC018437.1-201ENST00000492214 406 ntBASIC1.16□□□□□ -2.22
COL4A2P08572 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.16□□□□□ -2.22
COL4A2P08572 AC109927.2-201ENST00000506416 303 ntBASIC1.16□□□□□ -2.22
COL4A2P08572 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.16□□□□□ -2.22
COL4A2P08572 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1.16□□□□□ -2.22
COL4A2P08572 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.16□□□□□ -2.22
COL4A2P08572 AC007363.1-201ENST00000604736 620 ntBASIC1.16□□□□□ -2.22
COL4A2P08572 AC123912.5-201ENST00000605470 343 ntBASIC1.16□□□□□ -2.22
COL4A2P08572 AC144521.1-201ENST00000607148 956 ntBASIC1.16□□□□□ -2.22
COL4A2P08572 AC009233.1-201ENST00000616477 371 ntBASIC1.16□□□□□ -2.22
COL4A2P08572 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
COL4A2P08572 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
COL4A2P08572 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.16□□□□□ -2.22
COL4A2P08572 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
COL4A2P08572 RNU6-817P-201ENST00000391083 104 ntBASIC1.15□□□□□ -2.22
COL4A2P08572 SNORD56-201ENST00000413522 71 ntBASIC1.15□□□□□ -2.22
COL4A2P08572 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.15□□□□□ -2.22
COL4A2P08572 GDI2P2-201ENST00000445131 608 ntBASIC1.15□□□□□ -2.22
COL4A2P08572 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.15□□□□□ -2.22
COL4A2P08572 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.15□□□□□ -2.22
COL4A2P08572 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC1.15□□□□□ -2.22
COL4A2P08572 RPS29P23-201ENST00000458635 123 ntBASIC1.15□□□□□ -2.22
COL4A2P08572 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.15□□□□□ -2.22
COL4A2P08572 SMURF2P1-201ENST00000514992 481 ntBASIC1.15□□□□□ -2.22
COL4A2P08572 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.15□□□□□ -2.22
COL4A2P08572 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.15□□□□□ -2.22
COL4A2P08572 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.15□□□□□ -2.22
COL4A2P08572 DUXAP5-201ENST00000529668 529 ntBASIC1.15□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms