Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.58□□□□□ -2
COL5A2P05997 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.58□□□□□ -2
COL5A2P05997 MIR5583-1-201ENST00000580941 59 ntBASIC2.58□□□□□ -2
COL5A2P05997 MIR4742-201ENST00000581069 85 ntBASIC2.58□□□□□ -2
COL5A2P05997 AC005498.1-201ENST00000592125 465 ntBASIC2.58□□□□□ -2
COL5A2P05997 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.58□□□□□ -2
COL5A2P05997 XIAPP1-201ENST00000603162 600 ntBASIC2.58□□□□□ -2
COL5A2P05997 AC008162.1-201ENST00000604718 254 ntBASIC2.58□□□□□ -2
COL5A2P05997 AL670379.4-201ENST00000605279 254 ntBASIC2.58□□□□□ -2
COL5A2P05997 HMGN2P28-201ENST00000606102 262 ntBASIC2.58□□□□□ -2
COL5A2P05997 AL603758.1-201ENST00000618654 241 ntBASIC2.58□□□□□ -2
COL5A2P05997 AC090574.1-201ENST00000623186 233 ntBASIC2.58□□□□□ -2
COL5A2P05997 AC090617.7-201ENST00000623952 126 ntBASIC2.58□□□□□ -2
COL5A2P05997 MTND1P37-201ENST00000636562 264 ntBASIC2.58□□□□□ -2
COL5A2P05997 MIR1302-1-201ENST00000637932 143 ntBASIC2.58□□□□□ -2
COL5A2P05997 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.57□□□□□ -2
COL5A2P05997 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
COL5A2P05997 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.57□□□□□ -2
COL5A2P05997 Y_RNA.184-201ENST00000363884 108 ntBASIC2.57□□□□□ -2
COL5A2P05997 RNU6-61P-201ENST00000365528 109 ntBASIC2.57□□□□□ -2
COL5A2P05997 RNU6-1304P-201ENST00000411374 106 ntBASIC2.57□□□□□ -2
COL5A2P05997 RNA5SP111-201ENST00000411386 101 ntBASIC2.57□□□□□ -2
COL5A2P05997 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.57□□□□□ -2
COL5A2P05997 AL353729.1-201ENST00000425044 720 ntBASIC2.57□□□□□ -2
COL5A2P05997 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.57□□□□□ -2
COL5A2P05997 RPL7L1P10-201ENST00000427790 463 ntBASIC2.57□□□□□ -2
COL5A2P05997 SNRPFP3-201ENST00000457792 225 ntBASIC2.57□□□□□ -2
COL5A2P05997 SNORD97-201ENST00000459187 142 ntBASIC2.57□□□□□ -2
COL5A2P05997 RNU6-329P-201ENST00000459618 107 ntBASIC2.57□□□□□ -2
COL5A2P05997 FGF7P4-201ENST00000509595 295 ntBASIC2.57□□□□□ -2
COL5A2P05997 AC108078.2-201ENST00000510750 236 ntBASIC2.57□□□□□ -2
COL5A2P05997 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.57□□□□□ -2
COL5A2P05997 RNU6-1092P-201ENST00000516955 87 ntBASIC2.57□□□□□ -2
COL5A2P05997 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.57□□□□□ -2
COL5A2P05997 AC087241.2-201ENST00000535801 324 ntBASIC2.57□□□□□ -2
COL5A2P05997 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.57□□□□□ -2
COL5A2P05997 PSMA3P-201ENST00000555485 635 ntBASIC2.57□□□□□ -2
COL5A2P05997 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.57□□□□□ -2
COL5A2P05997 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.57□□□□□ -2
COL5A2P05997 MIR4703-201ENST00000577728 79 ntBASIC2.57□□□□□ -2
COL5A2P05997 MIR4255-201ENST00000579351 72 ntBASIC2.57□□□□□ -2
COL5A2P05997 MIR5089-201ENST00000580047 84 ntBASIC2.57□□□□□ -2
COL5A2P05997 AL133255.1-201ENST00000606374 441 ntBASIC2.57□□□□□ -2
COL5A2P05997 AL050343.2-201ENST00000607338 280 ntBASIC2.57□□□□□ -2
COL5A2P05997 TUG1_2.1-201ENST00000614234 87 ntBASIC2.57□□□□□ -2
COL5A2P05997 FRG1KP-201ENST00000623592 341 ntBASIC2.57□□□□□ -2
COL5A2P05997 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.57□□□□□ -2
COL5A2P05997 DDX10P1-201ENST00000448545 1933 ntBASIC2.56□□□□□ -2
COL5A2P05997 Y_RNA.378-201ENST00000365652 113 ntBASIC2.56□□□□□ -2
COL5A2P05997 Y_RNA.394-201ENST00000383942 103 ntBASIC2.56□□□□□ -2
COL5A2P05997 RNU6-831P-201ENST00000384548 107 ntBASIC2.56□□□□□ -2
COL5A2P05997 RNU2-29P-201ENST00000410423 189 ntBASIC2.56□□□□□ -2
COL5A2P05997 RNU4-65P-201ENST00000410473 140 ntBASIC2.56□□□□□ -2
COL5A2P05997 RPS20P15-201ENST00000412792 311 ntBASIC2.56□□□□□ -2
COL5A2P05997 OR6C66P-201ENST00000414917 930 ntBASIC2.56□□□□□ -2
COL5A2P05997 BTF3P4-201ENST00000418852 495 ntBASIC2.56□□□□□ -2
COL5A2P05997 RAC1P6-201ENST00000423911 575 ntBASIC2.56□□□□□ -2
COL5A2P05997 MTCO3P46-201ENST00000425787 232 ntBASIC2.56□□□□□ -2
COL5A2P05997 SAR1AP4-201ENST00000429225 591 ntBASIC2.56□□□□□ -2
COL5A2P05997 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.56□□□□□ -2
COL5A2P05997 AC024082.2-201ENST00000434771 238 ntBASIC2.56□□□□□ -2
COL5A2P05997 PRPS1P1-201ENST00000445305 876 ntBASIC2.56□□□□□ -2
COL5A2P05997 HMGN2P26-201ENST00000463169 339 ntBASIC2.56□□□□□ -2
COL5A2P05997 MTND4P17-201ENST00000470444 350 ntBASIC2.56□□□□□ -2
COL5A2P05997 RPL23AP55-201ENST00000498163 452 ntBASIC2.56□□□□□ -2
COL5A2P05997 HMGN1P13-201ENST00000505795 138 ntBASIC2.56□□□□□ -2
COL5A2P05997 RNU6-1095P-201ENST00000516148 108 ntBASIC2.56□□□□□ -2
COL5A2P05997 MTND4P7-201ENST00000523876 130 ntBASIC2.56□□□□□ -2
COL5A2P05997 AL118558.2-201ENST00000556294 238 ntBASIC2.56□□□□□ -2
COL5A2P05997 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.56□□□□□ -2
COL5A2P05997 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.56□□□□□ -2
COL5A2P05997 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.56□□□□□ -2
COL5A2P05997 CTHRC1P1-201ENST00000605383 469 ntBASIC2.56□□□□□ -2
COL5A2P05997 AL359821.1-201ENST00000605519 182 ntBASIC2.56□□□□□ -2
COL5A2P05997 uc_338.34-201ENST00000617467 174 ntBASIC2.56□□□□□ -2
COL5A2P05997 AC084768.2-201ENST00000622736 221 ntBASIC2.56□□□□□ -2
COL5A2P05997 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.55□□□□□ -2
COL5A2P05997 AC103988.1-201ENST00000566382 2177 ntBASIC2.55□□□□□ -2
COL5A2P05997 RNU6-960P-201ENST00000364056 120 ntBASIC2.55□□□□□ -2
COL5A2P05997 SNORA23-201ENST00000365128 182 ntBASIC2.55□□□□□ -2
COL5A2P05997 SMIM11P1-201ENST00000369586 178 ntBASIC2.55□□□□□ -2
COL5A2P05997 RNU6-946P-201ENST00000383878 107 ntBASIC2.55□□□□□ -2
COL5A2P05997 Y_RNA.460-201ENST00000384255 102 ntBASIC2.55□□□□□ -2
COL5A2P05997 RNU6-193P-201ENST00000410977 107 ntBASIC2.55□□□□□ -2
COL5A2P05997 AL451054.2-201ENST00000420896 202 ntBASIC2.55□□□□□ -2
COL5A2P05997 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.55□□□□□ -2
COL5A2P05997 AP000705.1-201ENST00000454567 350 ntBASIC2.55□□□□□ -2
COL5A2P05997 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.55□□□□□ -2
COL5A2P05997 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.55□□□□□ -2
COL5A2P05997 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.55□□□□□ -2
COL5A2P05997 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.55□□□□□ -2
COL5A2P05997 Y_RNA.665-201ENST00000516177 98 ntBASIC2.55□□□□□ -2
COL5A2P05997 RNU6-277P-201ENST00000516272 106 ntBASIC2.55□□□□□ -2
COL5A2P05997 AC109635.4-202ENST00000531666 412 ntBASIC2.55□□□□□ -2
COL5A2P05997 AL121821.2-201ENST00000556081 394 ntBASIC2.55□□□□□ -2
COL5A2P05997 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.55□□□□□ -2
COL5A2P05997 AL356280.1-201ENST00000603614 379 ntBASIC2.55□□□□□ -2
COL5A2P05997 AL670379.6-201ENST00000603753 252 ntBASIC2.55□□□□□ -2
COL5A2P05997 AL670379.11-201ENST00000604059 253 ntBASIC2.55□□□□□ -2
COL5A2P05997 AL670379.10-201ENST00000604330 253 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms