Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.15□□□□□ -2.43
APOBP04114 RNA5SP258-201ENST00000362750 119 ntBASIC-0.15□□□□□ -2.43
APOBP04114 MIR587-201ENST00000384845 96 ntBASIC-0.15□□□□□ -2.43
APOBP04114 RNA5SP300-201ENST00000391197 107 ntBASIC-0.15□□□□□ -2.43
APOBP04114 AL139098.1-201ENST00000407291 389 ntBASIC-0.15□□□□□ -2.43
APOBP04114 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC-0.15□□□□□ -2.43
APOBP04114 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC-0.15□□□□□ -2.43
APOBP04114 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.15□□□□□ -2.43
APOBP04114 ZNF705CP-201ENST00000530515 889 ntBASIC-0.15□□□□□ -2.43
APOBP04114 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.15□□□□□ -2.43
APOBP04114 AC233702.2-202ENST00000562547 291 ntBASIC-0.15□□□□□ -2.43
APOBP04114 AC027104.1-201ENST00000563702 681 ntBASIC-0.15□□□□□ -2.43
APOBP04114 AC110792.4-201ENST00000609843 298 ntBASIC-0.15□□□□□ -2.43
APOBP04114 AC017037.3-201ENST00000625016 472 ntBASIC-0.15□□□□□ -2.43
APOBP04114 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.15□□□□□ -2.43
APOBP04114 PDCL2P1-201ENST00000419302 352 ntBASIC-0.15□□□□□ -2.43
APOBP04114 AC006548.1-201ENST00000427470 102 ntBASIC-0.15□□□□□ -2.43
APOBP04114 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC-0.15□□□□□ -2.43
APOBP04114 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.15□□□□□ -2.43
APOBP04114 AC087897.1-201ENST00000550134 156 ntBASIC-0.15□□□□□ -2.43
APOBP04114 MIR8063-201ENST00000621930 81 ntBASIC-0.15□□□□□ -2.43
APOBP04114 CR381572.1-201ENST00000625098 102 ntBASIC-0.15□□□□□ -2.43
APOBP04114 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.15□□□□□ -2.43
APOBP04114 Y_RNA.28-201ENST00000362554 111 ntBASIC-0.16□□□□□ -2.43
APOBP04114 Y_RNA.559-201ENST00000384686 107 ntBASIC-0.16□□□□□ -2.43
APOBP04114 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC-0.16□□□□□ -2.43
APOBP04114 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC-0.16□□□□□ -2.43
APOBP04114 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC-0.16□□□□□ -2.43
APOBP04114 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC-0.16□□□□□ -2.43
APOBP04114 AC012669.1-201ENST00000603209 283 ntBASIC-0.16□□□□□ -2.43
APOBP04114 AC097065.2-201ENST00000608159 533 ntBASIC-0.16□□□□□ -2.43
APOBP04114 Z99571.1-201ENST00000636677 394 ntBASIC-0.16□□□□□ -2.43
APOBP04114 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.16□□□□□ -2.43
APOBP04114 RNA5SP205-201ENST00000364653 136 ntBASIC-0.16□□□□□ -2.43
APOBP04114 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC-0.16□□□□□ -2.43
APOBP04114 MTND4P20-201ENST00000424125 869 ntBASIC-0.16□□□□□ -2.43
APOBP04114 RPS27P16-201ENST00000425758 201 ntBASIC-0.16□□□□□ -2.43
APOBP04114 AC132479.1-201ENST00000449160 144 ntBASIC-0.16□□□□□ -2.43
APOBP04114 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC-0.16□□□□□ -2.43
APOBP04114 AP1S2P1-201ENST00000457344 379 ntBASIC-0.16□□□□□ -2.43
APOBP04114 AC087481.2-201ENST00000565492 330 ntBASIC-0.16□□□□□ -2.43
APOBP04114 SNORA4.1-201ENST00000364263 144 ntBASIC-0.16□□□□□ -2.44
APOBP04114 CALM2P3-201ENST00000400429 449 ntBASIC-0.16□□□□□ -2.44
APOBP04114 RNU6-319P-201ENST00000516025 108 ntBASIC-0.16□□□□□ -2.44
APOBP04114 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC-0.16□□□□□ -2.44
APOBP04114 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.16□□□□□ -2.44
APOBP04114 AC090116.1-201ENST00000615679 446 ntBASIC-0.16□□□□□ -2.44
APOBP04114 RN7SKP266-201ENST00000410232 287 ntBASIC-0.16□□□□□ -2.44
APOBP04114 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC-0.16□□□□□ -2.44
APOBP04114 BTF3P8-201ENST00000414577 526 ntBASIC-0.16□□□□□ -2.44
APOBP04114 AC092573.2-201ENST00000434546 243 ntBASIC-0.16□□□□□ -2.44
APOBP04114 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC-0.16□□□□□ -2.44
APOBP04114 AC093534.1-201ENST00000504977 132 ntBASIC-0.16□□□□□ -2.44
APOBP04114 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC-0.16□□□□□ -2.44
APOBP04114 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC-0.16□□□□□ -2.44
APOBP04114 SNORA68.3-201ENST00000515906 83 ntBASIC-0.16□□□□□ -2.44
APOBP04114 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC-0.16□□□□□ -2.44
APOBP04114 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC-0.16□□□□□ -2.44
APOBP04114 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC-0.16□□□□□ -2.44
APOBP04114 RNU6-270P-201ENST00000364131 105 ntBASIC-0.17□□□□□ -2.44
APOBP04114 SNORA1.1-201ENST00000364671 133 ntBASIC-0.17□□□□□ -2.44
APOBP04114 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC-0.17□□□□□ -2.44
APOBP04114 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC-0.17□□□□□ -2.44
APOBP04114 AC092634.6-201ENST00000418558 192 ntBASIC-0.17□□□□□ -2.44
APOBP04114 FABP5P4-201ENST00000437203 171 ntBASIC-0.17□□□□□ -2.44
APOBP04114 RPL18AP17-201ENST00000455326 198 ntBASIC-0.17□□□□□ -2.44
APOBP04114 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC-0.17□□□□□ -2.44
APOBP04114 SNORA31.4-201ENST00000516049 129 ntBASIC-0.17□□□□□ -2.44
APOBP04114 AC090888.2-201ENST00000559765 1144 ntBASIC-0.17□□□□□ -2.44
APOBP04114 AC092106.3-201ENST00000611308 722 ntBASIC-0.17□□□□□ -2.44
APOBP04114 RNU2-21P-201ENST00000410368 188 ntBASIC-0.17□□□□□ -2.44
APOBP04114 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC-0.17□□□□□ -2.44
APOBP04114 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC-0.17□□□□□ -2.44
APOBP04114 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC-0.17□□□□□ -2.44
APOBP04114 BPTFP1-201ENST00000579209 492 ntBASIC-0.17□□□□□ -2.44
APOBP04114 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC-0.17□□□□□ -2.44
APOBP04114 PCMTD1P7-201ENST00000634506 357 ntBASIC-0.17□□□□□ -2.44
APOBP04114 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC-0.17□□□□□ -2.44
APOBP04114 AL049737.1-201ENST00000413920 1403 ntBASIC-0.17□□□□□ -2.44
APOBP04114 MIR29C-201ENST00000385231 88 ntBASIC-0.17□□□□□ -2.44
APOBP04114 AC063976.4-201ENST00000421971 163 ntBASIC-0.17□□□□□ -2.44
APOBP04114 AC024082.2-201ENST00000434771 238 ntBASIC-0.17□□□□□ -2.44
APOBP04114 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC-0.17□□□□□ -2.44
APOBP04114 SNORA31.6-201ENST00000516241 130 ntBASIC-0.17□□□□□ -2.44
APOBP04114 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC-0.17□□□□□ -2.44
APOBP04114 AC007151.1-201ENST00000572774 483 ntBASIC-0.17□□□□□ -2.44
APOBP04114 HMGN2P15-201ENST00000585707 270 ntBASIC-0.17□□□□□ -2.44
APOBP04114 AP000403.1-201ENST00000603349 851 ntBASIC-0.17□□□□□ -2.44
APOBP04114 AL355297.3-201ENST00000604082 446 ntBASIC-0.17□□□□□ -2.44
APOBP04114 AL162730.1-201ENST00000605734 292 ntBASIC-0.17□□□□□ -2.44
APOBP04114 AC064807.4-201ENST00000607201 407 ntBASIC-0.17□□□□□ -2.44
APOBP04114 Z82243.1-201ENST00000609432 473 ntBASIC-0.17□□□□□ -2.44
APOBP04114 AC009237.15-201ENST00000610252 501 ntBASIC-0.17□□□□□ -2.44
APOBP04114 MIR302D-201ENST00000362275 68 ntBASIC-0.18□□□□□ -2.44
APOBP04114 RNU6-1331P-201ENST00000363658 106 ntBASIC-0.18□□□□□ -2.44
APOBP04114 RNU6V-201ENST00000384105 107 ntBASIC-0.18□□□□□ -2.44
APOBP04114 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.18□□□□□ -2.44
APOBP04114 MTND4P11-201ENST00000417020 1058 ntBASIC-0.18□□□□□ -2.44
APOBP04114 MTND1P20-201ENST00000430341 950 ntBASIC-0.18□□□□□ -2.44
APOBP04114 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC-0.18□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms