Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
APOEP02649 AC124016.2-201ENST00000610058 665 ntBASIC1.12□□□□□ -2.23
APOEP02649 AC245297.2-201ENST00000610119 565 ntBASIC1.12□□□□□ -2.23
APOEP02649 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.11□□□□□ -2.23
APOEP02649 RNU1-22P-201ENST00000363334 158 ntBASIC1.11□□□□□ -2.23
APOEP02649 RNU6-487P-201ENST00000365430 104 ntBASIC1.11□□□□□ -2.23
APOEP02649 SMIM11P1-201ENST00000369586 178 ntBASIC1.11□□□□□ -2.23
APOEP02649 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.11□□□□□ -2.23
APOEP02649 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.11□□□□□ -2.23
APOEP02649 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.11□□□□□ -2.23
APOEP02649 Y_RNA.597-201ENST00000410463 100 ntBASIC1.11□□□□□ -2.23
APOEP02649 RNU2-23P-201ENST00000410545 195 ntBASIC1.11□□□□□ -2.23
APOEP02649 AC092809.3-201ENST00000415453 231 ntBASIC1.11□□□□□ -2.23
APOEP02649 VPS26BP1-201ENST00000417155 755 ntBASIC1.11□□□□□ -2.23
APOEP02649 MTND2P4-201ENST00000445034 1004 ntBASIC1.11□□□□□ -2.23
APOEP02649 Z73417.1-201ENST00000447373 778 ntBASIC1.11□□□□□ -2.23
APOEP02649 AC245517.4-201ENST00000448601 281 ntBASIC1.11□□□□□ -2.23
APOEP02649 AL139824.2-201ENST00000458731 1095 ntBASIC1.11□□□□□ -2.23
APOEP02649 SNORD97-201ENST00000459187 142 ntBASIC1.11□□□□□ -2.23
APOEP02649 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.11□□□□□ -2.23
APOEP02649 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.11□□□□□ -2.23
APOEP02649 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.11□□□□□ -2.23
APOEP02649 AC024060.1-201ENST00000607052 494 ntBASIC1.11□□□□□ -2.23
APOEP02649 AC018926.1-201ENST00000616335 435 ntBASIC1.11□□□□□ -2.23
APOEP02649 MIR8063-201ENST00000621930 81 ntBASIC1.11□□□□□ -2.23
APOEP02649 AC130454.1-201ENST00000622948 401 ntBASIC1.11□□□□□ -2.23
APOEP02649 AC022513.1-201ENST00000624512 117 ntBASIC1.11□□□□□ -2.23
APOEP02649 AC008993.2-201ENST00000631744 806 ntBASIC1.11□□□□□ -2.23
APOEP02649 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
APOEP02649 MIR29B2-201ENST00000385055 81 ntBASIC1.1□□□□□ -2.23
APOEP02649 MIR513A1-201ENST00000385138 129 ntBASIC1.1□□□□□ -2.23
APOEP02649 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
APOEP02649 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
APOEP02649 MIR1267-201ENST00000408723 78 ntBASIC1.1□□□□□ -2.23
APOEP02649 RN7SKP266-201ENST00000410232 287 ntBASIC1.1□□□□□ -2.23
APOEP02649 AL365338.1-201ENST00000422282 858 ntBASIC1.1□□□□□ -2.23
APOEP02649 AC092648.1-201ENST00000425870 423 ntBASIC1.1□□□□□ -2.23
APOEP02649 AL669831.1-202ENST00000428504 417 ntBASIC1.1□□□□□ -2.23
APOEP02649 RPS25P9-201ENST00000435591 252 ntBASIC1.1□□□□□ -2.23
APOEP02649 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.1□□□□□ -2.23
APOEP02649 AC087477.1-201ENST00000465747 340 ntBASIC1.1□□□□□ -2.23
APOEP02649 CR383656.8-201ENST00000549046 145 ntBASIC1.1□□□□□ -2.23
APOEP02649 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.1□□□□□ -2.23
APOEP02649 AL355472.4-201ENST00000610233 626 ntBASIC1.1□□□□□ -2.23
APOEP02649 AL365204.3-201ENST00000612448 685 ntBASIC1.1□□□□□ -2.23
APOEP02649 AL121890.5-201ENST00000620848 304 ntBASIC1.1□□□□□ -2.23
APOEP02649 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC1.1□□□□□ -2.23
APOEP02649 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
APOEP02649 AC068205.3-201ENST00000636385 468 ntBASIC1.1□□□□□ -2.23
APOEP02649 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
APOEP02649 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.1□□□□□ -2.23
APOEP02649 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.09□□□□□ -2.23
APOEP02649 MIR302D-201ENST00000362275 68 ntBASIC1.09□□□□□ -2.23
APOEP02649 RNU6-112P-201ENST00000363599 104 ntBASIC1.09□□□□□ -2.23
APOEP02649 RNU6-560P-201ENST00000364007 108 ntBASIC1.09□□□□□ -2.23
APOEP02649 SNORD1A-201ENST00000364968 72 ntBASIC1.09□□□□□ -2.23
APOEP02649 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
APOEP02649 SNORD116-20-201ENST00000384529 92 ntBASIC1.09□□□□□ -2.23
APOEP02649 RNU6-160P-201ENST00000384591 107 ntBASIC1.09□□□□□ -2.23
APOEP02649 MIR1305-201ENST00000408300 86 ntBASIC1.09□□□□□ -2.23
APOEP02649 RPL37P10-201ENST00000412884 288 ntBASIC1.09□□□□□ -2.23
APOEP02649 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.09□□□□□ -2.23
APOEP02649 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.09□□□□□ -2.23
APOEP02649 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.09□□□□□ -2.23
APOEP02649 AC003071.1-201ENST00000451219 789 ntBASIC1.09□□□□□ -2.23
APOEP02649 AC108059.3-201ENST00000456388 214 ntBASIC1.09□□□□□ -2.23
APOEP02649 AC093899.1-201ENST00000457984 376 ntBASIC1.09□□□□□ -2.23
APOEP02649 snoU13.14-201ENST00000459372 104 ntBASIC1.09□□□□□ -2.23
APOEP02649 AC130509.1-201ENST00000464158 433 ntBASIC1.09□□□□□ -2.23
APOEP02649 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.09□□□□□ -2.23
APOEP02649 AC009646.1-201ENST00000510455 318 ntBASIC1.09□□□□□ -2.23
APOEP02649 AP003122.4-201ENST00000530980 758 ntBASIC1.09□□□□□ -2.23
APOEP02649 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.09□□□□□ -2.23
APOEP02649 AC112220.2-201ENST00000605513 533 ntBASIC1.09□□□□□ -2.23
APOEP02649 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.09□□□□□ -2.23
APOEP02649 AC120349.3-201ENST00000624377 529 ntBASIC1.09□□□□□ -2.23
APOEP02649 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
APOEP02649 SNORA63.3-201ENST00000362682 132 ntBASIC1.08□□□□□ -2.24
APOEP02649 SNORD3E-201ENST00000362899 217 ntBASIC1.08□□□□□ -2.24
APOEP02649 RNU6-414P-201ENST00000363705 104 ntBASIC1.08□□□□□ -2.24
APOEP02649 RNU6-72P-201ENST00000384285 79 ntBASIC1.08□□□□□ -2.24
APOEP02649 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
APOEP02649 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.08□□□□□ -2.24
APOEP02649 ISCA1P6-201ENST00000427740 390 ntBASIC1.08□□□□□ -2.24
APOEP02649 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.08□□□□□ -2.24
APOEP02649 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.08□□□□□ -2.24
APOEP02649 CALM1P1-201ENST00000442082 433 ntBASIC1.08□□□□□ -2.24
APOEP02649 GDI2P2-201ENST00000445131 608 ntBASIC1.08□□□□□ -2.24
APOEP02649 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
APOEP02649 AL133373.1-201ENST00000497098 94 ntBASIC1.08□□□□□ -2.24
APOEP02649 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.08□□□□□ -2.24
APOEP02649 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.08□□□□□ -2.24
APOEP02649 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.08□□□□□ -2.24
APOEP02649 HSPE1P19-201ENST00000603327 295 ntBASIC1.08□□□□□ -2.24
APOEP02649 AC123912.5-201ENST00000605470 343 ntBASIC1.08□□□□□ -2.24
APOEP02649 SNORD114-21-201ENST00000606412 72 ntBASIC1.08□□□□□ -2.24
APOEP02649 MIR15A-201ENST00000607334 83 ntBASIC1.08□□□□□ -2.24
APOEP02649 AL355816.2-201ENST00000610049 647 ntBASIC1.08□□□□□ -2.24
APOEP02649 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
APOEP02649 AC245060.5-201ENST00000610778 3293 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms