Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC009902.1-201ENST00000519351 183 ntBASIC2.82□□□□□ -1.96
LDLRP01130 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.82□□□□□ -1.96
LDLRP01130 AL391261.3-201ENST00000557194 520 ntBASIC2.82□□□□□ -1.96
LDLRP01130 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.82□□□□□ -1.96
LDLRP01130 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
LDLRP01130 MIR548AC-201ENST00000585049 88 ntBASIC2.82□□□□□ -1.96
LDLRP01130 MIR3942-201ENST00000585264 109 ntBASIC2.82□□□□□ -1.96
LDLRP01130 HMGN2P15-201ENST00000585707 270 ntBASIC2.82□□□□□ -1.96
LDLRP01130 RPL23AP78-201ENST00000599928 470 ntBASIC2.82□□□□□ -1.96
LDLRP01130 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.82□□□□□ -1.96
LDLRP01130 AC124303.1-201ENST00000605703 360 ntBASIC2.82□□□□□ -1.96
LDLRP01130 AL121655.1-201ENST00000605811 308 ntBASIC2.82□□□□□ -1.96
LDLRP01130 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.82□□□□□ -1.96
LDLRP01130 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.82□□□□□ -1.96
LDLRP01130 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
LDLRP01130 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.82□□□□□ -1.96
LDLRP01130 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.82□□□□□ -1.96
LDLRP01130 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.82□□□□□ -1.96
LDLRP01130 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
LDLRP01130 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.82□□□□□ -1.96
LDLRP01130 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
LDLRP01130 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
LDLRP01130 Y_RNA.378-201ENST00000365652 113 ntBASIC2.81□□□□□ -1.96
LDLRP01130 RNU6-395P-201ENST00000365662 106 ntBASIC2.81□□□□□ -1.96
LDLRP01130 U8.9-201ENST00000365667 134 ntBASIC2.81□□□□□ -1.96
LDLRP01130 SNORA54-201ENST00000384281 123 ntBASIC2.81□□□□□ -1.96
LDLRP01130 RNU6-1179P-201ENST00000384667 107 ntBASIC2.81□□□□□ -1.96
LDLRP01130 SNORD15B-201ENST00000384714 146 ntBASIC2.81□□□□□ -1.96
LDLRP01130 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.81□□□□□ -1.96
LDLRP01130 MIR888-201ENST00000401186 77 ntBASIC2.81□□□□□ -1.96
LDLRP01130 RNU6-1304P-201ENST00000411374 106 ntBASIC2.81□□□□□ -1.96
LDLRP01130 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.81□□□□□ -1.96
LDLRP01130 SKA2P1-201ENST00000425592 390 ntBASIC2.81□□□□□ -1.96
LDLRP01130 AL139132.1-201ENST00000431587 344 ntBASIC2.81□□□□□ -1.96
LDLRP01130 SCARNA18-201ENST00000459004 134 ntBASIC2.81□□□□□ -1.96
LDLRP01130 AC083904.1-201ENST00000487828 231 ntBASIC2.81□□□□□ -1.96
LDLRP01130 AC022493.1-201ENST00000492984 337 ntBASIC2.81□□□□□ -1.96
LDLRP01130 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.81□□□□□ -1.96
LDLRP01130 RNU6-864P-201ENST00000516256 108 ntBASIC2.81□□□□□ -1.96
LDLRP01130 RNU6-1038P-201ENST00000516516 104 ntBASIC2.81□□□□□ -1.96
LDLRP01130 RNA5SP367-201ENST00000516557 118 ntBASIC2.81□□□□□ -1.96
LDLRP01130 RNU6-572P-201ENST00000516724 80 ntBASIC2.81□□□□□ -1.96
LDLRP01130 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.81□□□□□ -1.96
LDLRP01130 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.81□□□□□ -1.96
LDLRP01130 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.81□□□□□ -1.96
LDLRP01130 BNIP3P25-201ENST00000596023 559 ntBASIC2.81□□□□□ -1.96
LDLRP01130 AL670379.10-201ENST00000604330 253 ntBASIC2.81□□□□□ -1.96
LDLRP01130 AL670379.9-201ENST00000605428 253 ntBASIC2.81□□□□□ -1.96
LDLRP01130 AL080274.1-201ENST00000605565 220 ntBASIC2.81□□□□□ -1.96
LDLRP01130 AL355802.3-201ENST00000607571 545 ntBASIC2.81□□□□□ -1.96
LDLRP01130 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.81□□□□□ -1.96
LDLRP01130 uc_338.15-201ENST00000615470 191 ntBASIC2.81□□□□□ -1.96
LDLRP01130 AC084781.2-201ENST00000615568 161 ntBASIC2.81□□□□□ -1.96
LDLRP01130 AC008121.3-201ENST00000618726 433 ntBASIC2.81□□□□□ -1.96
LDLRP01130 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.81□□□□□ -1.96
LDLRP01130 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.81□□□□□ -1.96
LDLRP01130 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.81□□□□□ -1.96
LDLRP01130 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LDLRP01130 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LDLRP01130 AL161431.1-201ENST00000618966 4205 ntBASIC2.8□□□□□ -1.96
LDLRP01130 SNORD3E-201ENST00000362899 217 ntBASIC2.8□□□□□ -1.96
LDLRP01130 RNU6-371P-201ENST00000364283 108 ntBASIC2.8□□□□□ -1.96
LDLRP01130 RNU6-715P-201ENST00000365204 103 ntBASIC2.8□□□□□ -1.96
LDLRP01130 SNORA33.2-201ENST00000365413 134 ntBASIC2.8□□□□□ -1.96
LDLRP01130 SNORD21-201ENST00000383953 95 ntBASIC2.8□□□□□ -1.96
LDLRP01130 RNU1-73P-201ENST00000383971 164 ntBASIC2.8□□□□□ -1.96
LDLRP01130 SNORA26.7-201ENST00000391288 122 ntBASIC2.8□□□□□ -1.96
LDLRP01130 RNA5SP184-201ENST00000411071 108 ntBASIC2.8□□□□□ -1.96
LDLRP01130 RNA5SP492-201ENST00000411330 114 ntBASIC2.8□□□□□ -1.96
LDLRP01130 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.8□□□□□ -1.96
LDLRP01130 AL714022.1-201ENST00000439897 151 ntBASIC2.8□□□□□ -1.96
LDLRP01130 RNU7-152P-201ENST00000458982 64 ntBASIC2.8□□□□□ -1.96
LDLRP01130 Y_RNA.631-201ENST00000459607 101 ntBASIC2.8□□□□□ -1.96
LDLRP01130 RPS27AP9-201ENST00000477681 438 ntBASIC2.8□□□□□ -1.96
LDLRP01130 RN7SL499P-201ENST00000481141 276 ntBASIC2.8□□□□□ -1.96
LDLRP01130 AL163540.1-201ENST00000485382 386 ntBASIC2.8□□□□□ -1.96
LDLRP01130 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.8□□□□□ -1.96
LDLRP01130 AC091885.1-201ENST00000506658 268 ntBASIC2.8□□□□□ -1.96
LDLRP01130 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.8□□□□□ -1.96
LDLRP01130 RNU6-559P-201ENST00000516151 98 ntBASIC2.8□□□□□ -1.96
LDLRP01130 SNORA31.19-201ENST00000517079 126 ntBASIC2.8□□□□□ -1.96
LDLRP01130 MIR4319-201ENST00000577285 85 ntBASIC2.8□□□□□ -1.96
LDLRP01130 MIR5692A1-201ENST00000580523 69 ntBASIC2.8□□□□□ -1.96
LDLRP01130 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.8□□□□□ -1.96
LDLRP01130 APOOP1-201ENST00000604695 592 ntBASIC2.8□□□□□ -1.96
LDLRP01130 AC019159.1-201ENST00000605094 187 ntBASIC2.8□□□□□ -1.96
LDLRP01130 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.8□□□□□ -1.96
LDLRP01130 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
LDLRP01130 U2.21-201ENST00000637295 81 ntBASIC2.8□□□□□ -1.96
LDLRP01130 MIR622-201ENST00000638396 96 ntBASIC2.8□□□□□ -1.96
LDLRP01130 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
LDLRP01130 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
LDLRP01130 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
LDLRP01130 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
LDLRP01130 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
LDLRP01130 AC073325.2-201ENST00000339545 159 ntBASIC2.79□□□□□ -1.96
LDLRP01130 Y_RNA.31-201ENST00000362574 102 ntBASIC2.79□□□□□ -1.96
LDLRP01130 RNU6-778P-201ENST00000363269 103 ntBASIC2.79□□□□□ -1.96
LDLRP01130 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
LDLRP01130 Y_RNA.395-201ENST00000383945 109 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms