Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AC006011.1-201ENST00000442758 349 ntBASIC3.62□□□□□ -1.83
CNOT4O95628 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.62□□□□□ -1.83
CNOT4O95628 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CNOT4O95628 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.62□□□□□ -1.83
CNOT4O95628 AC010099.1-201ENST00000455434 375 ntBASIC3.62□□□□□ -1.83
CNOT4O95628 RPL21P11-201ENST00000461458 483 ntBASIC3.62□□□□□ -1.83
CNOT4O95628 RPL21P39-201ENST00000463605 483 ntBASIC3.62□□□□□ -1.83
CNOT4O95628 RPS29P27-201ENST00000463711 170 ntBASIC3.62□□□□□ -1.83
CNOT4O95628 AC132942.1-201ENST00000486753 483 ntBASIC3.62□□□□□ -1.83
CNOT4O95628 AC093591.1-201ENST00000491435 481 ntBASIC3.62□□□□□ -1.83
CNOT4O95628 RPL21P16-201ENST00000495531 483 ntBASIC3.62□□□□□ -1.83
CNOT4O95628 SNORA31.19-201ENST00000517079 126 ntBASIC3.62□□□□□ -1.83
CNOT4O95628 DEFB108E-201ENST00000524692 240 ntBASIC3.62□□□□□ -1.83
CNOT4O95628 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.62□□□□□ -1.83
CNOT4O95628 AC005476.1-201ENST00000554427 397 ntBASIC3.62□□□□□ -1.83
CNOT4O95628 AC104581.2-201ENST00000572227 430 ntBASIC3.62□□□□□ -1.83
CNOT4O95628 MIR4300-201ENST00000581016 96 ntBASIC3.62□□□□□ -1.83
CNOT4O95628 MIR5684-201ENST00000585074 65 ntBASIC3.62□□□□□ -1.83
CNOT4O95628 AC012603.1-201ENST00000606424 528 ntBASIC3.62□□□□□ -1.83
CNOT4O95628 AC005046.1-201ENST00000608515 625 ntBASIC3.62□□□□□ -1.83
CNOT4O95628 AC099778.2-201ENST00000610904 211 ntBASIC3.62□□□□□ -1.83
CNOT4O95628 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CNOT4O95628 AC092628.2-201ENST00000622492 339 ntBASIC3.62□□□□□ -1.83
CNOT4O95628 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CNOT4O95628 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CNOT4O95628 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.62□□□□□ -1.83
CNOT4O95628 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.62□□□□□ -1.83
CNOT4O95628 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CNOT4O95628 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.62□□□□□ -1.83
CNOT4O95628 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CNOT4O95628 Y_RNA.54-201ENST00000362766 105 ntBASIC3.61□□□□□ -1.83
CNOT4O95628 RNU6-227P-201ENST00000362865 103 ntBASIC3.61□□□□□ -1.83
CNOT4O95628 Y_RNA.180-201ENST00000363867 113 ntBASIC3.61□□□□□ -1.83
CNOT4O95628 RNY1-201ENST00000364228 113 ntBASIC3.61□□□□□ -1.83
CNOT4O95628 Y_RNA.297-201ENST00000364950 91 ntBASIC3.61□□□□□ -1.83
CNOT4O95628 Y_RNA.405-201ENST00000383979 100 ntBASIC3.61□□□□□ -1.83
CNOT4O95628 Y_RNA.451-201ENST00000384200 100 ntBASIC3.61□□□□□ -1.83
CNOT4O95628 Y_RNA.524-201ENST00000384564 100 ntBASIC3.61□□□□□ -1.83
CNOT4O95628 Y_RNA.561-201ENST00000384694 100 ntBASIC3.61□□□□□ -1.83
CNOT4O95628 SNORD115-46-201ENST00000390982 71 ntBASIC3.61□□□□□ -1.83
CNOT4O95628 SNORD58.1-201ENST00000391313 66 ntBASIC3.61□□□□□ -1.83
CNOT4O95628 SNORA48.8-201ENST00000391324 134 ntBASIC3.61□□□□□ -1.83
CNOT4O95628 MRPL35P1-201ENST00000404272 572 ntBASIC3.61□□□□□ -1.83
CNOT4O95628 AL603910.2-201ENST00000407268 136 ntBASIC3.61□□□□□ -1.83
CNOT4O95628 RNA5SP39-201ENST00000411245 120 ntBASIC3.61□□□□□ -1.83
CNOT4O95628 AP000275.1-201ENST00000411943 390 ntBASIC3.61□□□□□ -1.83
CNOT4O95628 RPL23AP22-201ENST00000437556 453 ntBASIC3.61□□□□□ -1.83
CNOT4O95628 RN7SL585P-201ENST00000470538 280 ntBASIC3.61□□□□□ -1.83
CNOT4O95628 AC006517.1-201ENST00000480485 328 ntBASIC3.61□□□□□ -1.83
CNOT4O95628 AC006483.1-201ENST00000487308 313 ntBASIC3.61□□□□□ -1.83
CNOT4O95628 RPS23P5-201ENST00000495419 428 ntBASIC3.61□□□□□ -1.83
CNOT4O95628 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.61□□□□□ -1.83
CNOT4O95628 RNU4-71P-201ENST00000516258 113 ntBASIC3.61□□□□□ -1.83
CNOT4O95628 MIR2114-201ENST00000516645 80 ntBASIC3.61□□□□□ -1.83
CNOT4O95628 Y_RNA.706-201ENST00000516933 99 ntBASIC3.61□□□□□ -1.83
CNOT4O95628 RNU6-789P-201ENST00000517105 102 ntBASIC3.61□□□□□ -1.83
CNOT4O95628 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.61□□□□□ -1.83
CNOT4O95628 AC136932.1-201ENST00000574771 208 ntBASIC3.61□□□□□ -1.83
CNOT4O95628 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.61□□□□□ -1.83
CNOT4O95628 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.61□□□□□ -1.83
CNOT4O95628 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CNOT4O95628 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CNOT4O95628 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
CNOT4O95628 UBE3AP2-201ENST00000429033 2259 ntBASIC3.6□□□□□ -1.83
CNOT4O95628 LINC02555-201ENST00000563933 1951 ntBASIC3.6□□□□□ -1.83
CNOT4O95628 RNU1-35P-201ENST00000362782 153 ntBASIC3.6□□□□□ -1.83
CNOT4O95628 Y_RNA.65-201ENST00000362846 100 ntBASIC3.6□□□□□ -1.83
CNOT4O95628 RNU6-799P-201ENST00000363567 107 ntBASIC3.6□□□□□ -1.83
CNOT4O95628 SNORD46.1-201ENST00000364139 104 ntBASIC3.6□□□□□ -1.83
CNOT4O95628 RNA5SP139-201ENST00000364340 117 ntBASIC3.6□□□□□ -1.83
CNOT4O95628 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.6□□□□□ -1.83
CNOT4O95628 Y_RNA.274-201ENST00000364714 101 ntBASIC3.6□□□□□ -1.83
CNOT4O95628 RNU6-198P-201ENST00000384258 104 ntBASIC3.6□□□□□ -1.83
CNOT4O95628 RNU6-166P-201ENST00000384371 107 ntBASIC3.6□□□□□ -1.83
CNOT4O95628 RNY3P4-201ENST00000384428 101 ntBASIC3.6□□□□□ -1.83
CNOT4O95628 BX679664.1-201ENST00000434429 253 ntBASIC3.6□□□□□ -1.83
CNOT4O95628 RNU7-87P-201ENST00000459343 62 ntBASIC3.6□□□□□ -1.83
CNOT4O95628 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.6□□□□□ -1.83
CNOT4O95628 RNU6-377P-201ENST00000515965 102 ntBASIC3.6□□□□□ -1.83
CNOT4O95628 MIR2355-201ENST00000517199 87 ntBASIC3.6□□□□□ -1.83
CNOT4O95628 AP002770.2-201ENST00000543613 532 ntBASIC3.6□□□□□ -1.83
CNOT4O95628 RN7SL703P-201ENST00000578485 302 ntBASIC3.6□□□□□ -1.83
CNOT4O95628 RPL23AP78-201ENST00000599928 470 ntBASIC3.6□□□□□ -1.83
CNOT4O95628 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.6□□□□□ -1.83
CNOT4O95628 BX284668.6-201ENST00000606899 438 ntBASIC3.6□□□□□ -1.83
CNOT4O95628 U2.22-201ENST00000636441 106 ntBASIC3.6□□□□□ -1.83
CNOT4O95628 AL450472.1-202ENST00000637286 180 ntBASIC3.6□□□□□ -1.83
CNOT4O95628 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.6□□□□□ -1.83
CNOT4O95628 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.59□□□□□ -1.83
CNOT4O95628 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.59□□□□□ -1.83
CNOT4O95628 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
CNOT4O95628 HSPA8P1-201ENST00000425843 1833 ntBASIC3.59□□□□□ -1.83
CNOT4O95628 MIR208A-201ENST00000362287 71 ntBASIC3.59□□□□□ -1.83
CNOT4O95628 SNORA71.3-201ENST00000362582 128 ntBASIC3.59□□□□□ -1.83
CNOT4O95628 Y_RNA.123-201ENST00000363338 102 ntBASIC3.59□□□□□ -1.83
CNOT4O95628 Y_RNA.150-201ENST00000363562 102 ntBASIC3.59□□□□□ -1.83
CNOT4O95628 Y_RNA.270-201ENST00000364693 104 ntBASIC3.59□□□□□ -1.83
CNOT4O95628 Y_RNA.333-201ENST00000365274 102 ntBASIC3.59□□□□□ -1.83
CNOT4O95628 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CNOT4O95628 RNU6-217P-201ENST00000384164 104 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms