Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 AL691447.3-201ENST00000635020 330 ntBASIC1.61□□□□□ -2.15
SEMA3DO95025 RNU6-1010P-201ENST00000362757 107 ntBASIC1.6□□□□□ -2.15
SEMA3DO95025 U8.3-201ENST00000363321 132 ntBASIC1.6□□□□□ -2.15
SEMA3DO95025 RNU6-553P-201ENST00000364047 96 ntBASIC1.6□□□□□ -2.15
SEMA3DO95025 RNU6-371P-201ENST00000364283 108 ntBASIC1.6□□□□□ -2.15
SEMA3DO95025 RNU6-169P-201ENST00000365336 107 ntBASIC1.6□□□□□ -2.15
SEMA3DO95025 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
SEMA3DO95025 RNA5SP212-201ENST00000391223 107 ntBASIC1.6□□□□□ -2.15
SEMA3DO95025 AL031577.2-201ENST00000404133 280 ntBASIC1.6□□□□□ -2.15
SEMA3DO95025 MIR1261-201ENST00000408659 82 ntBASIC1.6□□□□□ -2.15
SEMA3DO95025 RNU6-195P-201ENST00000411352 109 ntBASIC1.6□□□□□ -2.15
SEMA3DO95025 EEF1A1P40-201ENST00000412883 573 ntBASIC1.6□□□□□ -2.15
SEMA3DO95025 RPL21P90-201ENST00000415692 466 ntBASIC1.6□□□□□ -2.15
SEMA3DO95025 Z99497.1-201ENST00000421282 135 ntBASIC1.6□□□□□ -2.15
SEMA3DO95025 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.6□□□□□ -2.15
SEMA3DO95025 AC000111.3-201ENST00000433478 193 ntBASIC1.6□□□□□ -2.15
SEMA3DO95025 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.6□□□□□ -2.15
SEMA3DO95025 MTND1P30-201ENST00000441241 901 ntBASIC1.6□□□□□ -2.15
SEMA3DO95025 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.6□□□□□ -2.15
SEMA3DO95025 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.6□□□□□ -2.15
SEMA3DO95025 RNU6-295P-201ENST00000516901 104 ntBASIC1.6□□□□□ -2.15
SEMA3DO95025 CR383656.8-201ENST00000549046 145 ntBASIC1.6□□□□□ -2.15
SEMA3DO95025 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.6□□□□□ -2.15
SEMA3DO95025 AL031274.2-201ENST00000599419 203 ntBASIC1.6□□□□□ -2.15
SEMA3DO95025 AL078605.1-201ENST00000603529 500 ntBASIC1.6□□□□□ -2.15
SEMA3DO95025 AC092354.1-201ENST00000606057 376 ntBASIC1.6□□□□□ -2.15
SEMA3DO95025 AC098614.4-201ENST00000607601 462 ntBASIC1.6□□□□□ -2.15
SEMA3DO95025 uc_338.15-201ENST00000615470 191 ntBASIC1.6□□□□□ -2.15
SEMA3DO95025 AF246928.1-201ENST00000623768 87 ntBASIC1.6□□□□□ -2.15
SEMA3DO95025 AC079248.2-201ENST00000623779 326 ntBASIC1.6□□□□□ -2.15
SEMA3DO95025 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.6□□□□□ -2.15
SEMA3DO95025 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.6□□□□□ -2.15
SEMA3DO95025 MTND4P4-201ENST00000439033 1366 ntBASIC1.59□□□□□ -2.15
SEMA3DO95025 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
SEMA3DO95025 Y_RNA.40-201ENST00000362645 93 ntBASIC1.59□□□□□ -2.15
SEMA3DO95025 RNY1P12-201ENST00000364251 105 ntBASIC1.59□□□□□ -2.15
SEMA3DO95025 RNY4P34-201ENST00000364779 95 ntBASIC1.59□□□□□ -2.15
SEMA3DO95025 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
SEMA3DO95025 RNU6-622P-201ENST00000384272 103 ntBASIC1.59□□□□□ -2.15
SEMA3DO95025 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
SEMA3DO95025 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.59□□□□□ -2.15
SEMA3DO95025 AL358453.1-201ENST00000422522 250 ntBASIC1.59□□□□□ -2.15
SEMA3DO95025 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.59□□□□□ -2.15
SEMA3DO95025 HMGN2P3-201ENST00000433603 273 ntBASIC1.59□□□□□ -2.15
SEMA3DO95025 HMGN2P5-201ENST00000436882 273 ntBASIC1.59□□□□□ -2.15
SEMA3DO95025 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.59□□□□□ -2.15
SEMA3DO95025 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.59□□□□□ -2.15
SEMA3DO95025 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.59□□□□□ -2.15
SEMA3DO95025 RPL23AP63-201ENST00000498752 471 ntBASIC1.59□□□□□ -2.15
SEMA3DO95025 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.59□□□□□ -2.15
SEMA3DO95025 MTCYBP35-201ENST00000503630 1137 ntBASIC1.59□□□□□ -2.15
SEMA3DO95025 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.59□□□□□ -2.15
SEMA3DO95025 RNU6-586P-201ENST00000517265 104 ntBASIC1.59□□□□□ -2.15
SEMA3DO95025 AC034114.1-201ENST00000520293 285 ntBASIC1.59□□□□□ -2.15
SEMA3DO95025 AC106038.2-201ENST00000520706 568 ntBASIC1.59□□□□□ -2.15
SEMA3DO95025 GNAI2P1-201ENST00000541815 315 ntBASIC1.59□□□□□ -2.15
SEMA3DO95025 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
SEMA3DO95025 BNIP3P6-201ENST00000549284 499 ntBASIC1.59□□□□□ -2.15
SEMA3DO95025 AC109446.2-201ENST00000567872 497 ntBASIC1.59□□□□□ -2.15
SEMA3DO95025 ELOCP5-201ENST00000604924 333 ntBASIC1.59□□□□□ -2.15
SEMA3DO95025 AC122133.1-201ENST00000613964 233 ntBASIC1.59□□□□□ -2.15
SEMA3DO95025 AC008121.3-201ENST00000618726 433 ntBASIC1.59□□□□□ -2.15
SEMA3DO95025 AC090517.3-201ENST00000625170 141 ntBASIC1.59□□□□□ -2.15
SEMA3DO95025 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
SEMA3DO95025 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SEMA3DO95025 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SEMA3DO95025 AL356292.1-201ENST00000283110 373 ntBASIC1.58□□□□□ -2.16
SEMA3DO95025 SNORA8-201ENST00000384574 139 ntBASIC1.58□□□□□ -2.16
SEMA3DO95025 Y_RNA.576-201ENST00000384781 102 ntBASIC1.58□□□□□ -2.16
SEMA3DO95025 SNORA26.9-201ENST00000391322 122 ntBASIC1.58□□□□□ -2.16
SEMA3DO95025 C1DP2-201ENST00000418167 426 ntBASIC1.58□□□□□ -2.16
SEMA3DO95025 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.58□□□□□ -2.16
SEMA3DO95025 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.58□□□□□ -2.16
SEMA3DO95025 MTND5P25-201ENST00000430499 799 ntBASIC1.58□□□□□ -2.16
SEMA3DO95025 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.58□□□□□ -2.16
SEMA3DO95025 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.58□□□□□ -2.16
SEMA3DO95025 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC1.58□□□□□ -2.16
SEMA3DO95025 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.58□□□□□ -2.16
SEMA3DO95025 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.58□□□□□ -2.16
SEMA3DO95025 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.58□□□□□ -2.16
SEMA3DO95025 AC116562.3-201ENST00000506136 177 ntBASIC1.58□□□□□ -2.16
SEMA3DO95025 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.58□□□□□ -2.16
SEMA3DO95025 SNORA43.2-201ENST00000516652 128 ntBASIC1.58□□□□□ -2.16
SEMA3DO95025 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.58□□□□□ -2.16
SEMA3DO95025 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.58□□□□□ -2.16
SEMA3DO95025 AC068587.5-201ENST00000528506 175 ntBASIC1.58□□□□□ -2.16
SEMA3DO95025 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.58□□□□□ -2.16
SEMA3DO95025 MIR4760-201ENST00000585040 80 ntBASIC1.58□□□□□ -2.16
SEMA3DO95025 BNIP3P25-201ENST00000596023 559 ntBASIC1.58□□□□□ -2.16
SEMA3DO95025 BNIP3P8-201ENST00000597863 560 ntBASIC1.58□□□□□ -2.16
SEMA3DO95025 MIR502-201ENST00000606349 86 ntBASIC1.58□□□□□ -2.16
SEMA3DO95025 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.58□□□□□ -2.16
SEMA3DO95025 AC093648.1-201ENST00000623546 606 ntBASIC1.58□□□□□ -2.16
SEMA3DO95025 AC007494.3-201ENST00000624660 743 ntBASIC1.58□□□□□ -2.16
SEMA3DO95025 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.58□□□□□ -2.16
SEMA3DO95025 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.58□□□□□ -2.16
SEMA3DO95025 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
SEMA3DO95025 RNU6-179P-201ENST00000363350 107 ntBASIC1.57□□□□□ -2.16
SEMA3DO95025 RNU6-1274P-201ENST00000384557 107 ntBASIC1.57□□□□□ -2.16
SEMA3DO95025 RNU2-8P-201ENST00000410727 190 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms