Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC-0.11□□□□□ -2.43
USH2AO75445 RPS3AP17-201ENST00000472594 777 ntBASIC-0.11□□□□□ -2.43
USH2AO75445 RPL17P19-201ENST00000489069 552 ntBASIC-0.11□□□□□ -2.43
USH2AO75445 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC-0.11□□□□□ -2.43
USH2AO75445 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC-0.11□□□□□ -2.43
USH2AO75445 RNA5SP216-201ENST00000516111 123 ntBASIC-0.11□□□□□ -2.43
USH2AO75445 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC-0.11□□□□□ -2.43
USH2AO75445 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC-0.11□□□□□ -2.43
USH2AO75445 AC022254.1-201ENST00000567857 235 ntBASIC-0.11□□□□□ -2.43
USH2AO75445 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.11□□□□□ -2.43
USH2AO75445 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC-0.11□□□□□ -2.43
USH2AO75445 AL355073.2-201ENST00000612106 557 ntBASIC-0.11□□□□□ -2.43
USH2AO75445 RNU6-312P-201ENST00000364629 107 ntBASIC-0.11□□□□□ -2.43
USH2AO75445 RNU6-163P-201ENST00000384396 106 ntBASIC-0.11□□□□□ -2.43
USH2AO75445 RNU6-952P-201ENST00000391164 108 ntBASIC-0.11□□□□□ -2.43
USH2AO75445 RPL7L1P10-201ENST00000427790 463 ntBASIC-0.11□□□□□ -2.43
USH2AO75445 AL606517.2-201ENST00000442855 241 ntBASIC-0.11□□□□□ -2.43
USH2AO75445 AC087879.1-201ENST00000474343 374 ntBASIC-0.11□□□□□ -2.43
USH2AO75445 AC079382.1-201ENST00000493346 557 ntBASIC-0.11□□□□□ -2.43
USH2AO75445 HMGB1P35-201ENST00000503360 598 ntBASIC-0.11□□□□□ -2.43
USH2AO75445 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.11□□□□□ -2.43
USH2AO75445 AC025423.2-201ENST00000537570 439 ntBASIC-0.11□□□□□ -2.43
USH2AO75445 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC-0.11□□□□□ -2.43
USH2AO75445 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC-0.11□□□□□ -2.43
USH2AO75445 Z98751.3-201ENST00000604447 521 ntBASIC-0.11□□□□□ -2.43
USH2AO75445 AC025588.4-201ENST00000615802 908 ntBASIC-0.11□□□□□ -2.43
USH2AO75445 MIR7844-201ENST00000616161 122 ntBASIC-0.11□□□□□ -2.43
USH2AO75445 AL158163.2-201ENST00000619110 700 ntBASIC-0.11□□□□□ -2.43
USH2AO75445 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.11□□□□□ -2.43
USH2AO75445 AL391994.1-201ENST00000254724 282 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 RNU4-12P-201ENST00000365233 139 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 RNU6-360P-201ENST00000390944 104 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 SNORD12-201ENST00000391002 90 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 SNORA75.3-201ENST00000391231 150 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-0.12□□□□□ -2.43
USH2AO75445 C1DP2-201ENST00000418167 426 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 GTF2IP3-201ENST00000433887 494 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 NANOGP2-201ENST00000435391 727 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 GXYLT1P1-201ENST00000446657 490 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 C1DP4-201ENST00000455429 424 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
USH2AO75445 RAP1BP2-201ENST00000478270 544 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 RNU6-983P-201ENST00000516004 103 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 RN7SKP19-201ENST00000516016 252 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 AC084824.4-201ENST00000620106 731 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-0.12□□□□□ -2.43
USH2AO75445 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC-0.12□□□□□ -2.43
USH2AO75445 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.12□□□□□ -2.43
USH2AO75445 TRAPPC13P1-201ENST00000435991 1062 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC-0.12□□□□□ -2.43
USH2AO75445 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC-0.12□□□□□ -2.43
USH2AO75445 AC093303.1-201ENST00000514549 295 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 SNORD116-28-201ENST00000516123 91 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.12□□□□□ -2.43
USH2AO75445 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC-0.12□□□□□ -2.43
USH2AO75445 AC138749.5-201ENST00000611461 208 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 MIR4788-201ENST00000639104 80 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 ANKRD36BP1-202ENST00000604892 1417 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
USH2AO75445 RNU6-1263P-201ENST00000384601 106 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 MIR518D-201ENST00000385014 87 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 RNA5SP300-201ENST00000391197 107 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC-0.12□□□□□ -2.43
USH2AO75445 RNU7-23P-201ENST00000459465 62 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC-0.12□□□□□ -2.43
USH2AO75445 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.12□□□□□ -2.43
USH2AO75445 RNU6-863P-201ENST00000515989 104 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 RNA5SP255-201ENST00000516370 107 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 AC109635.4-202ENST00000531666 412 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 MIR4499-201ENST00000584834 69 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 MIR4436A-201ENST00000585278 85 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 AC079395.3-201ENST00000615161 484 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 AL357080.1-201ENST00000617394 239 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 AC092192.1-201ENST00000633154 1018 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 AC106858.1-201ENST00000637497 429 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 MIR335-201ENST00000362173 94 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 SNORA42.1-201ENST00000363515 137 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 RNU6-748P-201ENST00000384648 107 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 AL049737.1-201ENST00000413920 1403 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 AC138623.1-201ENST00000418060 216 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 AC098614.2-201ENST00000426040 255 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC-0.12□□□□□ -2.43
USH2AO75445 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC-0.12□□□□□ -2.43
USH2AO75445 AC027119.1-201ENST00000440877 241 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 MTND1P22-201ENST00000510572 951 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-0.12□□□□□ -2.43
USH2AO75445 AC092447.9-201ENST00000603395 144 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 AC069304.2-201ENST00000605154 435 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 AL359697.1-201ENST00000624879 587 ntBASIC-0.12□□□□□ -2.43
USH2AO75445 RNA5SP240-201ENST00000365355 128 ntBASIC-0.13□□□□□ -2.43
USH2AO75445 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.13□□□□□ -2.43
USH2AO75445 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC-0.13□□□□□ -2.43
USH2AO75445 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC-0.13□□□□□ -2.43
USH2AO75445 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.13□□□□□ -2.43
USH2AO75445 RNA5SP470-201ENST00000516463 106 ntBASIC-0.13□□□□□ -2.43
USH2AO75445 HSPA8P13-201ENST00000523715 472 ntBASIC-0.13□□□□□ -2.43
USH2AO75445 OR8K4P-201ENST00000534608 872 ntBASIC-0.13□□□□□ -2.43
USH2AO75445 KATNBL1P5-201ENST00000605015 517 ntBASIC-0.13□□□□□ -2.43
USH2AO75445 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.13□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms