Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.14□□□□□ -1.75
VAMP4O75379 MIR5701-3-201ENST00000578890 82 ntBASIC4.14□□□□□ -1.75
VAMP4O75379 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC4.14□□□□□ -1.75
VAMP4O75379 MIR5701-1-201ENST00000585138 82 ntBASIC4.14□□□□□ -1.75
VAMP4O75379 AC009314.1-201ENST00000603871 304 ntBASIC4.14□□□□□ -1.75
VAMP4O75379 AC136601.2-201ENST00000604356 474 ntBASIC4.14□□□□□ -1.75
VAMP4O75379 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.14□□□□□ -1.75
VAMP4O75379 AC107871.2-201ENST00000612894 502 ntBASIC4.14□□□□□ -1.75
VAMP4O75379 MIR5701-2-201ENST00000615634 82 ntBASIC4.14□□□□□ -1.75
VAMP4O75379 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VAMP4O75379 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VAMP4O75379 AC007785.2-201ENST00000598627 1916 ntBASIC4.14□□□□□ -1.75
VAMP4O75379 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.14□□□□□ -1.75
VAMP4O75379 ZNF299P-201ENST00000406845 1804 ntBASIC4.14□□□□□ -1.75
VAMP4O75379 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
VAMP4O75379 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.13□□□□□ -1.75
VAMP4O75379 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.13□□□□□ -1.75
VAMP4O75379 SNORA63.7-201ENST00000365579 123 ntBASIC4.13□□□□□ -1.75
VAMP4O75379 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.13□□□□□ -1.75
VAMP4O75379 Y_RNA.476-201ENST00000384347 108 ntBASIC4.13□□□□□ -1.75
VAMP4O75379 MIR625-201ENST00000385047 85 ntBASIC4.13□□□□□ -1.75
VAMP4O75379 RNU2-68P-201ENST00000410878 191 ntBASIC4.13□□□□□ -1.75
VAMP4O75379 AC092047.1-201ENST00000424997 240 ntBASIC4.13□□□□□ -1.75
VAMP4O75379 AC092798.1-201ENST00000458542 409 ntBASIC4.13□□□□□ -1.75
VAMP4O75379 AC139453.3-201ENST00000493276 369 ntBASIC4.13□□□□□ -1.75
VAMP4O75379 RPL22P13-201ENST00000493291 347 ntBASIC4.13□□□□□ -1.75
VAMP4O75379 RN7SL504P-201ENST00000494496 287 ntBASIC4.13□□□□□ -1.75
VAMP4O75379 RNU6-1271P-201ENST00000517049 105 ntBASIC4.13□□□□□ -1.75
VAMP4O75379 SNORA31.19-201ENST00000517079 126 ntBASIC4.13□□□□□ -1.75
VAMP4O75379 Y_RNA.715-201ENST00000517082 110 ntBASIC4.13□□□□□ -1.75
VAMP4O75379 AP005902.1-201ENST00000521358 186 ntBASIC4.13□□□□□ -1.75
VAMP4O75379 AC104027.1-201ENST00000521887 300 ntBASIC4.13□□□□□ -1.75
VAMP4O75379 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.13□□□□□ -1.75
VAMP4O75379 AC131281.1-201ENST00000522984 164 ntBASIC4.13□□□□□ -1.75
VAMP4O75379 VN1R91P-201ENST00000594377 169 ntBASIC4.13□□□□□ -1.75
VAMP4O75379 AL158827.2-201ENST00000602494 330 ntBASIC4.13□□□□□ -1.75
VAMP4O75379 AC008121.1-201ENST00000603244 268 ntBASIC4.13□□□□□ -1.75
VAMP4O75379 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.13□□□□□ -1.75
VAMP4O75379 AL161629.2-201ENST00000615347 275 ntBASIC4.13□□□□□ -1.75
VAMP4O75379 AC073476.4-201ENST00000628409 72 ntBASIC4.13□□□□□ -1.75
VAMP4O75379 AL691447.3-201ENST00000635020 330 ntBASIC4.13□□□□□ -1.75
VAMP4O75379 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VAMP4O75379 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VAMP4O75379 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.13□□□□□ -1.75
VAMP4O75379 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
VAMP4O75379 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.12□□□□□ -1.75
VAMP4O75379 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.12□□□□□ -1.75
VAMP4O75379 AC118273.1-201ENST00000525324 3006 ntBASIC4.12□□□□□ -1.75
VAMP4O75379 RNU6-595P-201ENST00000363944 107 ntBASIC4.12□□□□□ -1.75
VAMP4O75379 Y_RNA.276-201ENST00000364732 109 ntBASIC4.12□□□□□ -1.75
VAMP4O75379 RNU6-26P-201ENST00000383985 107 ntBASIC4.12□□□□□ -1.75
VAMP4O75379 Y_RNA.533-201ENST00000384596 114 ntBASIC4.12□□□□□ -1.75
VAMP4O75379 RNU6-1222P-201ENST00000384615 107 ntBASIC4.12□□□□□ -1.75
VAMP4O75379 U3.42-201ENST00000408746 214 ntBASIC4.12□□□□□ -1.75
VAMP4O75379 RNU6-847P-201ENST00000411115 108 ntBASIC4.12□□□□□ -1.75
VAMP4O75379 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.12□□□□□ -1.75
VAMP4O75379 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.12□□□□□ -1.75
VAMP4O75379 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.12□□□□□ -1.75
VAMP4O75379 Z82210.1-201ENST00000440037 231 ntBASIC4.12□□□□□ -1.75
VAMP4O75379 OSTCP8-201ENST00000445117 448 ntBASIC4.12□□□□□ -1.75
VAMP4O75379 RPL32P34-201ENST00000486380 400 ntBASIC4.12□□□□□ -1.75
VAMP4O75379 Y_RNA.668-201ENST00000516233 93 ntBASIC4.12□□□□□ -1.75
VAMP4O75379 RNU6-911P-201ENST00000516523 104 ntBASIC4.12□□□□□ -1.75
VAMP4O75379 RNU4ATAC3P-201ENST00000516699 126 ntBASIC4.12□□□□□ -1.75
VAMP4O75379 RNU6-572P-201ENST00000516724 80 ntBASIC4.12□□□□□ -1.75
VAMP4O75379 AC008962.1-201ENST00000605729 304 ntBASIC4.12□□□□□ -1.75
VAMP4O75379 AC090425.1-201ENST00000610007 140 ntBASIC4.12□□□□□ -1.75
VAMP4O75379 AC099506.2-201ENST00000623074 221 ntBASIC4.12□□□□□ -1.75
VAMP4O75379 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VAMP4O75379 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VAMP4O75379 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.12□□□□□ -1.75
VAMP4O75379 MTND5P7-201ENST00000413558 1798 ntBASIC4.12□□□□□ -1.75
VAMP4O75379 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
VAMP4O75379 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VAMP4O75379 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
VAMP4O75379 BCLAF1P1-201ENST00000505813 2752 ntBASIC4.11□□□□□ -1.75
VAMP4O75379 RNU1-75P-201ENST00000347264 129 ntBASIC4.11□□□□□ -1.75
VAMP4O75379 Y_RNA.526-201ENST00000384572 110 ntBASIC4.11□□□□□ -1.75
VAMP4O75379 Y_RNA.551-201ENST00000384661 102 ntBASIC4.11□□□□□ -1.75
VAMP4O75379 RNU4-47P-201ENST00000410876 114 ntBASIC4.11□□□□□ -1.75
VAMP4O75379 SNRPEP9-201ENST00000436794 238 ntBASIC4.11□□□□□ -1.75
VAMP4O75379 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.11□□□□□ -1.75
VAMP4O75379 HMGN2P20-201ENST00000437531 273 ntBASIC4.11□□□□□ -1.75
VAMP4O75379 AL078601.1-201ENST00000444542 271 ntBASIC4.11□□□□□ -1.75
VAMP4O75379 HIGD1AP2-201ENST00000446367 280 ntBASIC4.11□□□□□ -1.75
VAMP4O75379 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VAMP4O75379 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.11□□□□□ -1.75
VAMP4O75379 HMGN1P18-201ENST00000457642 277 ntBASIC4.11□□□□□ -1.75
VAMP4O75379 RN7SL330P-201ENST00000469709 307 ntBASIC4.11□□□□□ -1.75
VAMP4O75379 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.11□□□□□ -1.75
VAMP4O75379 RNU1-143P-201ENST00000516296 146 ntBASIC4.11□□□□□ -1.75
VAMP4O75379 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.11□□□□□ -1.75
VAMP4O75379 AC040926.1-201ENST00000530195 238 ntBASIC4.11□□□□□ -1.75
VAMP4O75379 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
VAMP4O75379 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.11□□□□□ -1.75
VAMP4O75379 MIR5004-201ENST00000579078 107 ntBASIC4.11□□□□□ -1.75
VAMP4O75379 AC004805.2-201ENST00000605382 482 ntBASIC4.11□□□□□ -1.75
VAMP4O75379 U1.23-201ENST00000610293 146 ntBASIC4.11□□□□□ -1.75
VAMP4O75379 RNU1-68P-201ENST00000615382 146 ntBASIC4.11□□□□□ -1.75
VAMP4O75379 U1.39-201ENST00000621562 146 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms