Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 MIR1273C-201ENST00000578669 77 ntBASIC3.77□□□□□ -1.81
TRIM13O60858 SRGNP1-201ENST00000603392 451 ntBASIC3.77□□□□□ -1.81
TRIM13O60858 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.77□□□□□ -1.81
TRIM13O60858 AC073349.3-201ENST00000617616 186 ntBASIC3.77□□□□□ -1.81
TRIM13O60858 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TRIM13O60858 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.77□□□□□ -1.81
TRIM13O60858 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TRIM13O60858 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM13O60858 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.76□□□□□ -1.81
TRIM13O60858 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.76□□□□□ -1.81
TRIM13O60858 RNU6-449P-201ENST00000383914 107 ntBASIC3.76□□□□□ -1.81
TRIM13O60858 RNU6-514P-201ENST00000384208 107 ntBASIC3.76□□□□□ -1.81
TRIM13O60858 AC068287.1-201ENST00000430283 295 ntBASIC3.76□□□□□ -1.81
TRIM13O60858 HMGN2P21-201ENST00000447764 270 ntBASIC3.76□□□□□ -1.81
TRIM13O60858 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.76□□□□□ -1.81
TRIM13O60858 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.76□□□□□ -1.81
TRIM13O60858 ANP32BP2-201ENST00000454525 545 ntBASIC3.76□□□□□ -1.81
TRIM13O60858 RPL23AP45-201ENST00000476406 468 ntBASIC3.76□□□□□ -1.81
TRIM13O60858 AP001025.1-201ENST00000486139 332 ntBASIC3.76□□□□□ -1.81
TRIM13O60858 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.76□□□□□ -1.81
TRIM13O60858 RNU5F-8P-201ENST00000515941 111 ntBASIC3.76□□□□□ -1.81
TRIM13O60858 RNU6-927P-201ENST00000516199 100 ntBASIC3.76□□□□□ -1.81
TRIM13O60858 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.76□□□□□ -1.81
TRIM13O60858 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.76□□□□□ -1.81
TRIM13O60858 AL157871.3-201ENST00000557231 293 ntBASIC3.76□□□□□ -1.81
TRIM13O60858 AC051619.2-201ENST00000559063 397 ntBASIC3.76□□□□□ -1.81
TRIM13O60858 MIR4423-201ENST00000580922 80 ntBASIC3.76□□□□□ -1.81
TRIM13O60858 AC023043.4-201ENST00000612081 449 ntBASIC3.76□□□□□ -1.81
TRIM13O60858 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.76□□□□□ -1.81
TRIM13O60858 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM13O60858 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
TRIM13O60858 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
TRIM13O60858 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.75□□□□□ -1.81
TRIM13O60858 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
TRIM13O60858 RNU6-395P-201ENST00000365662 106 ntBASIC3.75□□□□□ -1.81
TRIM13O60858 Y_RNA.597-201ENST00000410463 100 ntBASIC3.75□□□□□ -1.81
TRIM13O60858 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.75□□□□□ -1.81
TRIM13O60858 TOMM22P1-201ENST00000418578 312 ntBASIC3.75□□□□□ -1.81
TRIM13O60858 OOSP1P1-201ENST00000423265 274 ntBASIC3.75□□□□□ -1.81
TRIM13O60858 AC010154.1-201ENST00000425857 269 ntBASIC3.75□□□□□ -1.81
TRIM13O60858 AL691449.1-201ENST00000426570 421 ntBASIC3.75□□□□□ -1.81
TRIM13O60858 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.75□□□□□ -1.81
TRIM13O60858 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.75□□□□□ -1.81
TRIM13O60858 TOMM22P6-201ENST00000465035 409 ntBASIC3.75□□□□□ -1.81
TRIM13O60858 AC114982.1-201ENST00000469402 321 ntBASIC3.75□□□□□ -1.81
TRIM13O60858 PPIAP15-201ENST00000479662 484 ntBASIC3.75□□□□□ -1.81
TRIM13O60858 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.75□□□□□ -1.81
TRIM13O60858 AL160314.1-201ENST00000490836 438 ntBASIC3.75□□□□□ -1.81
TRIM13O60858 SNORA27.4-201ENST00000516650 95 ntBASIC3.75□□□□□ -1.81
TRIM13O60858 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.75□□□□□ -1.81
TRIM13O60858 AK6P2-201ENST00000549020 471 ntBASIC3.75□□□□□ -1.81
TRIM13O60858 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.75□□□□□ -1.81
TRIM13O60858 MIR3921-201ENST00000577308 85 ntBASIC3.75□□□□□ -1.81
TRIM13O60858 MIR4277-201ENST00000578298 84 ntBASIC3.75□□□□□ -1.81
TRIM13O60858 MIR5096-201ENST00000583713 70 ntBASIC3.75□□□□□ -1.81
TRIM13O60858 MIR3138-201ENST00000585238 82 ntBASIC3.75□□□□□ -1.81
TRIM13O60858 AC084757.4-201ENST00000616350 526 ntBASIC3.75□□□□□ -1.81
TRIM13O60858 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.75□□□□□ -1.81
TRIM13O60858 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.75□□□□□ -1.81
TRIM13O60858 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.75□□□□□ -1.81
TRIM13O60858 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
TRIM13O60858 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TRIM13O60858 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
TRIM13O60858 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.74□□□□□ -1.81
TRIM13O60858 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TRIM13O60858 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.74□□□□□ -1.81
TRIM13O60858 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
TRIM13O60858 RNU6-222P-201ENST00000362438 107 ntBASIC3.74□□□□□ -1.81
TRIM13O60858 RNU6-227P-201ENST00000362865 103 ntBASIC3.74□□□□□ -1.81
TRIM13O60858 Y_RNA.215-201ENST00000364204 112 ntBASIC3.74□□□□□ -1.81
TRIM13O60858 SNORA7.2-201ENST00000364446 145 ntBASIC3.74□□□□□ -1.81
TRIM13O60858 RNU6-926P-201ENST00000384075 107 ntBASIC3.74□□□□□ -1.81
TRIM13O60858 MIR514A1-201ENST00000385133 98 ntBASIC3.74□□□□□ -1.81
TRIM13O60858 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.74□□□□□ -1.81
TRIM13O60858 AL592148.1-201ENST00000413568 445 ntBASIC3.74□□□□□ -1.81
TRIM13O60858 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.74□□□□□ -1.81
TRIM13O60858 snoU13.4-201ENST00000458916 104 ntBASIC3.74□□□□□ -1.81
TRIM13O60858 AC087588.1-201ENST00000462203 316 ntBASIC3.74□□□□□ -1.81
TRIM13O60858 RPS29P22-201ENST00000472363 168 ntBASIC3.74□□□□□ -1.81
TRIM13O60858 AL049874.1-201ENST00000489560 388 ntBASIC3.74□□□□□ -1.81
TRIM13O60858 AK3P2-201ENST00000507976 429 ntBASIC3.74□□□□□ -1.81
TRIM13O60858 RNU6-426P-201ENST00000516464 97 ntBASIC3.74□□□□□ -1.81
TRIM13O60858 Vault.1-201ENST00000516474 102 ntBASIC3.74□□□□□ -1.81
TRIM13O60858 AP005660.1-201ENST00000522972 293 ntBASIC3.74□□□□□ -1.81
TRIM13O60858 AC100821.1-201ENST00000523153 2479 ntBASIC3.74□□□□□ -1.81
TRIM13O60858 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.74□□□□□ -1.81
TRIM13O60858 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TRIM13O60858 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.74□□□□□ -1.81
TRIM13O60858 AC060766.3-201ENST00000591442 263 ntBASIC3.74□□□□□ -1.81
TRIM13O60858 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.74□□□□□ -1.81
TRIM13O60858 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.74□□□□□ -1.81
TRIM13O60858 AL445567.2-201ENST00000618935 498 ntBASIC3.74□□□□□ -1.81
TRIM13O60858 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
TRIM13O60858 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TRIM13O60858 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TRIM13O60858 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
TRIM13O60858 MAPK10-372ENST00000641954 3413 ntBASIC3.73□□□□□ -1.81
TRIM13O60858 UBE2L2-201ENST00000254302 429 ntBASIC3.73□□□□□ -1.81
TRIM13O60858 MIR410-201ENST00000362222 80 ntBASIC3.73□□□□□ -1.81
TRIM13O60858 Y_RNA.33-201ENST00000362591 102 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms