Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 Y_RNA.252-201ENST00000364556 101 ntBASIC2.66□□□□□ -1.98
LMX1BO60663 MCFD2P1-201ENST00000417812 300 ntBASIC2.66□□□□□ -1.98
LMX1BO60663 AC092047.1-201ENST00000424997 240 ntBASIC2.66□□□□□ -1.98
LMX1BO60663 AL353705.1-201ENST00000433468 480 ntBASIC2.66□□□□□ -1.98
LMX1BO60663 PIGFP3-201ENST00000441918 722 ntBASIC2.66□□□□□ -1.98
LMX1BO60663 NDUFB1P2-201ENST00000449477 176 ntBASIC2.66□□□□□ -1.98
LMX1BO60663 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.66□□□□□ -1.98
LMX1BO60663 AC113155.1-201ENST00000511141 769 ntBASIC2.66□□□□□ -1.98
LMX1BO60663 RNU1-54P-201ENST00000517181 120 ntBASIC2.66□□□□□ -1.98
LMX1BO60663 RN7SKP295-201ENST00000517264 153 ntBASIC2.66□□□□□ -1.98
LMX1BO60663 AC025755.1-201ENST00000521306 278 ntBASIC2.66□□□□□ -1.98
LMX1BO60663 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
LMX1BO60663 HMGB1P14-201ENST00000557424 591 ntBASIC2.66□□□□□ -1.98
LMX1BO60663 TRAV28-201ENST00000557548 323 ntBASIC2.66□□□□□ -1.98
LMX1BO60663 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.66□□□□□ -1.98
LMX1BO60663 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.66□□□□□ -1.98
LMX1BO60663 CPDP1-201ENST00000579660 283 ntBASIC2.66□□□□□ -1.98
LMX1BO60663 AC008737.2-201ENST00000599446 118 ntBASIC2.66□□□□□ -1.98
LMX1BO60663 AC136443.5-201ENST00000603741 370 ntBASIC2.66□□□□□ -1.98
LMX1BO60663 AP002826.1-201ENST00000608835 315 ntBASIC2.66□□□□□ -1.98
LMX1BO60663 AC007318.2-201ENST00000620999 243 ntBASIC2.66□□□□□ -1.98
LMX1BO60663 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.66□□□□□ -1.98
LMX1BO60663 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.66□□□□□ -1.98
LMX1BO60663 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
LMX1BO60663 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
LMX1BO60663 AC000403.1-201ENST00000613696 3585 ntBASIC2.65□□□□□ -1.98
LMX1BO60663 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
LMX1BO60663 AC073325.2-201ENST00000339545 159 ntBASIC2.65□□□□□ -1.99
LMX1BO60663 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.65□□□□□ -1.99
LMX1BO60663 Y_RNA.133-201ENST00000363428 110 ntBASIC2.65□□□□□ -1.99
LMX1BO60663 RNU6-1032P-201ENST00000384100 107 ntBASIC2.65□□□□□ -1.99
LMX1BO60663 RNU6-166P-201ENST00000384371 107 ntBASIC2.65□□□□□ -1.99
LMX1BO60663 RNY1P14-201ENST00000384426 108 ntBASIC2.65□□□□□ -1.99
LMX1BO60663 SNORA40C-201ENST00000391285 128 ntBASIC2.65□□□□□ -1.99
LMX1BO60663 AL030996.1-201ENST00000411430 235 ntBASIC2.65□□□□□ -1.99
LMX1BO60663 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.65□□□□□ -1.99
LMX1BO60663 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.65□□□□□ -1.99
LMX1BO60663 AL358176.2-201ENST00000425769 204 ntBASIC2.65□□□□□ -1.99
LMX1BO60663 RPL21P66-201ENST00000426566 466 ntBASIC2.65□□□□□ -1.99
LMX1BO60663 AC007919.1-201ENST00000429380 217 ntBASIC2.65□□□□□ -1.99
LMX1BO60663 AC022018.1-201ENST00000430685 241 ntBASIC2.65□□□□□ -1.99
LMX1BO60663 AL160004.2-201ENST00000432935 350 ntBASIC2.65□□□□□ -1.99
LMX1BO60663 VDAC1P3-201ENST00000434069 851 ntBASIC2.65□□□□□ -1.99
LMX1BO60663 HIGD1AP2-201ENST00000446367 280 ntBASIC2.65□□□□□ -1.99
LMX1BO60663 AL583843.1-201ENST00000456070 346 ntBASIC2.65□□□□□ -1.99
LMX1BO60663 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.65□□□□□ -1.99
LMX1BO60663 RN7SL283P-201ENST00000489055 303 ntBASIC2.65□□□□□ -1.99
LMX1BO60663 HMGB1P30-201ENST00000492455 606 ntBASIC2.65□□□□□ -1.99
LMX1BO60663 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.65□□□□□ -1.99
LMX1BO60663 RNU6-470P-201ENST00000515954 104 ntBASIC2.65□□□□□ -1.99
LMX1BO60663 SCARNA16.2-201ENST00000516520 172 ntBASIC2.65□□□□□ -1.99
LMX1BO60663 RNU6-143P-201ENST00000516942 93 ntBASIC2.65□□□□□ -1.99
LMX1BO60663 RNU6-699P-201ENST00000517081 110 ntBASIC2.65□□□□□ -1.99
LMX1BO60663 RNA5SP290-201ENST00000517133 127 ntBASIC2.65□□□□□ -1.99
LMX1BO60663 AC069113.1-201ENST00000517763 267 ntBASIC2.65□□□□□ -1.99
LMX1BO60663 TRAV32-201ENST00000553993 340 ntBASIC2.65□□□□□ -1.99
LMX1BO60663 MIR4474-201ENST00000579189 78 ntBASIC2.65□□□□□ -1.99
LMX1BO60663 OR1M4P-201ENST00000589199 287 ntBASIC2.65□□□□□ -1.99
LMX1BO60663 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
LMX1BO60663 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.65□□□□□ -1.99
LMX1BO60663 RPL12P50-201ENST00000603116 116 ntBASIC2.65□□□□□ -1.99
LMX1BO60663 AC006023.1-201ENST00000603944 259 ntBASIC2.65□□□□□ -1.99
LMX1BO60663 AC007485.1-201ENST00000616755 206 ntBASIC2.65□□□□□ -1.99
LMX1BO60663 Z69720.2-201ENST00000624755 279 ntBASIC2.65□□□□□ -1.99
LMX1BO60663 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.65□□□□□ -1.99
LMX1BO60663 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
LMX1BO60663 AC007785.2-201ENST00000598627 1916 ntBASIC2.65□□□□□ -1.99
LMX1BO60663 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
LMX1BO60663 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
LMX1BO60663 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
LMX1BO60663 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
LMX1BO60663 AC008568.2-201ENST00000623862 2313 ntBASIC2.64□□□□□ -1.99
LMX1BO60663 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.64□□□□□ -1.99
LMX1BO60663 MIR412-201ENST00000362142 91 ntBASIC2.64□□□□□ -1.99
LMX1BO60663 RNU6-600P-201ENST00000362524 99 ntBASIC2.64□□□□□ -1.99
LMX1BO60663 SNORA71.1-201ENST00000364523 117 ntBASIC2.64□□□□□ -1.99
LMX1BO60663 RNU6-741P-201ENST00000383889 107 ntBASIC2.64□□□□□ -1.99
LMX1BO60663 RNU6-639P-201ENST00000384074 107 ntBASIC2.64□□□□□ -1.99
LMX1BO60663 MIR517A-201ENST00000385001 87 ntBASIC2.64□□□□□ -1.99
LMX1BO60663 MIR1290-201ENST00000408735 78 ntBASIC2.64□□□□□ -1.99
LMX1BO60663 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.64□□□□□ -1.99
LMX1BO60663 RNU6-174P-201ENST00000410406 106 ntBASIC2.64□□□□□ -1.99
LMX1BO60663 Y_RNA.623-201ENST00000411128 95 ntBASIC2.64□□□□□ -1.99
LMX1BO60663 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.64□□□□□ -1.99
LMX1BO60663 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.64□□□□□ -1.99
LMX1BO60663 SNORD56-201ENST00000413522 71 ntBASIC2.64□□□□□ -1.99
LMX1BO60663 AL096701.2-201ENST00000416920 238 ntBASIC2.64□□□□□ -1.99
LMX1BO60663 TRIAP1P1-201ENST00000427062 225 ntBASIC2.64□□□□□ -1.99
LMX1BO60663 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.64□□□□□ -1.99
LMX1BO60663 AL356867.1-201ENST00000429623 299 ntBASIC2.64□□□□□ -1.99
LMX1BO60663 AL133396.1-201ENST00000432048 687 ntBASIC2.64□□□□□ -1.99
LMX1BO60663 AC009969.1-201ENST00000438726 172 ntBASIC2.64□□□□□ -1.99
LMX1BO60663 AC009237.8-201ENST00000445492 379 ntBASIC2.64□□□□□ -1.99
LMX1BO60663 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.64□□□□□ -1.99
LMX1BO60663 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.64□□□□□ -1.99
LMX1BO60663 AP004217.1-201ENST00000480579 346 ntBASIC2.64□□□□□ -1.99
LMX1BO60663 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.64□□□□□ -1.99
LMX1BO60663 AC021146.2-201ENST00000504736 556 ntBASIC2.64□□□□□ -1.99
LMX1BO60663 RN7SKP43-201ENST00000516173 320 ntBASIC2.64□□□□□ -1.99
LMX1BO60663 RNA5SP165-201ENST00000517142 115 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms