Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.97□□□□□ -2.25
SSNA1O43805 RPS29P29-201ENST00000456396 171 ntBASIC0.97□□□□□ -2.25
SSNA1O43805 RPL9P9-202ENST00000466501 579 ntBASIC0.97□□□□□ -2.25
SSNA1O43805 AC004223.1-201ENST00000479840 271 ntBASIC0.97□□□□□ -2.25
SSNA1O43805 SNORA3.4-201ENST00000515969 96 ntBASIC0.97□□□□□ -2.25
SSNA1O43805 RNU7-40P-201ENST00000516397 64 ntBASIC0.97□□□□□ -2.25
SSNA1O43805 RNA5SP437-201ENST00000517249 129 ntBASIC0.97□□□□□ -2.25
SSNA1O43805 AC023050.2-201ENST00000544968 387 ntBASIC0.97□□□□□ -2.25
SSNA1O43805 HMGB1P33-201ENST00000563485 527 ntBASIC0.97□□□□□ -2.25
SSNA1O43805 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.97□□□□□ -2.25
SSNA1O43805 MIR4648-201ENST00000580107 72 ntBASIC0.97□□□□□ -2.25
SSNA1O43805 DEFB131E-202ENST00000602581 683 ntBASIC0.97□□□□□ -2.25
SSNA1O43805 AL606834.3-201ENST00000602615 496 ntBASIC0.97□□□□□ -2.25
SSNA1O43805 AC112220.3-201ENST00000605502 502 ntBASIC0.97□□□□□ -2.25
SSNA1O43805 AL355802.3-201ENST00000607571 545 ntBASIC0.97□□□□□ -2.25
SSNA1O43805 AL590808.1-201ENST00000618696 141 ntBASIC0.97□□□□□ -2.25
SSNA1O43805 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.97□□□□□ -2.25
SSNA1O43805 RNU4-82P-201ENST00000362443 140 ntBASIC0.96□□□□□ -2.26
SSNA1O43805 RNU6-433P-201ENST00000363216 104 ntBASIC0.96□□□□□ -2.26
SSNA1O43805 RNU6-384P-201ENST00000364900 104 ntBASIC0.96□□□□□ -2.26
SSNA1O43805 SNORD116.1-201ENST00000365628 92 ntBASIC0.96□□□□□ -2.26
SSNA1O43805 RNU6-26P-201ENST00000383985 107 ntBASIC0.96□□□□□ -2.26
SSNA1O43805 Y_RNA.465-201ENST00000384293 102 ntBASIC0.96□□□□□ -2.26
SSNA1O43805 SNORA12-201ENST00000391162 147 ntBASIC0.96□□□□□ -2.26
SSNA1O43805 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.96□□□□□ -2.26
SSNA1O43805 RPL39P29-201ENST00000447779 157 ntBASIC0.96□□□□□ -2.26
SSNA1O43805 RNA5SP269-201ENST00000459032 137 ntBASIC0.96□□□□□ -2.26
SSNA1O43805 RPL36AP21-201ENST00000490372 323 ntBASIC0.96□□□□□ -2.26
SSNA1O43805 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.96□□□□□ -2.26
SSNA1O43805 AP003465.2-201ENST00000602571 373 ntBASIC0.96□□□□□ -2.26
SSNA1O43805 HSPE1P19-201ENST00000603327 295 ntBASIC0.96□□□□□ -2.26
SSNA1O43805 AL136363.2-201ENST00000604173 851 ntBASIC0.96□□□□□ -2.26
SSNA1O43805 MIR6845-201ENST00000613182 61 ntBASIC0.96□□□□□ -2.26
SSNA1O43805 RMST_4.1-201ENST00000616886 107 ntBASIC0.96□□□□□ -2.26
SSNA1O43805 MIR340-201ENST00000362125 95 ntBASIC0.95□□□□□ -2.26
SSNA1O43805 SNORD33-201ENST00000362761 85 ntBASIC0.95□□□□□ -2.26
SSNA1O43805 RNU6-960P-201ENST00000364056 120 ntBASIC0.95□□□□□ -2.26
SSNA1O43805 SNORA4.1-201ENST00000364263 144 ntBASIC0.95□□□□□ -2.26
SSNA1O43805 RNU6-360P-201ENST00000390944 104 ntBASIC0.95□□□□□ -2.26
SSNA1O43805 SNORA40.6-201ENST00000391153 128 ntBASIC0.95□□□□□ -2.26
SSNA1O43805 FTH1P25-201ENST00000447665 469 ntBASIC0.95□□□□□ -2.26
SSNA1O43805 APOA2-205ENST00000468465 421 ntTSL 2 BASIC0.95□□□□□ -2.26
SSNA1O43805 MTCO3P9-201ENST00000506989 781 ntBASIC0.95□□□□□ -2.26
SSNA1O43805 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC0.95□□□□□ -2.26
SSNA1O43805 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.95□□□□□ -2.26
SSNA1O43805 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.95□□□□□ -2.26
SSNA1O43805 CENPUP1-201ENST00000526649 1202 ntBASIC0.95□□□□□ -2.26
SSNA1O43805 AC068587.4-201ENST00000533893 186 ntBASIC0.95□□□□□ -2.26
SSNA1O43805 RAB11AP2-201ENST00000545905 639 ntBASIC0.95□□□□□ -2.26
SSNA1O43805 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.95□□□□□ -2.26
SSNA1O43805 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.95□□□□□ -2.26
SSNA1O43805 AL353778.1-201ENST00000603149 408 ntBASIC0.95□□□□□ -2.26
SSNA1O43805 AL645939.4-201ENST00000604495 135 ntBASIC0.95□□□□□ -2.26
SSNA1O43805 BNIP3P31-201ENST00000604515 566 ntBASIC0.95□□□□□ -2.26
SSNA1O43805 AC090578.1-201ENST00000604955 591 ntBASIC0.95□□□□□ -2.26
SSNA1O43805 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC0.95□□□□□ -2.26
SSNA1O43805 OR4G3P-201ENST00000633500 913 ntBASIC0.95□□□□□ -2.26
SSNA1O43805 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.94□□□□□ -2.26
SSNA1O43805 Y_RNA.46-201ENST00000362695 102 ntBASIC0.94□□□□□ -2.26
SSNA1O43805 SNORD32B-201ENST00000364460 84 ntBASIC0.94□□□□□ -2.26
SSNA1O43805 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
SSNA1O43805 PIGPP2-201ENST00000411569 458 ntBASIC0.94□□□□□ -2.26
SSNA1O43805 EIF1P1-201ENST00000421436 341 ntBASIC0.94□□□□□ -2.26
SSNA1O43805 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC0.94□□□□□ -2.26
SSNA1O43805 MRPL35P3-201ENST00000421557 364 ntBASIC0.94□□□□□ -2.26
SSNA1O43805 ART2BP-201ENST00000453501 499 ntBASIC0.94□□□□□ -2.26
SSNA1O43805 AC006026.2-201ENST00000457376 180 ntBASIC0.94□□□□□ -2.26
SSNA1O43805 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.94□□□□□ -2.26
SSNA1O43805 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.94□□□□□ -2.26
SSNA1O43805 RNU5F-2P-201ENST00000516066 82 ntBASIC0.94□□□□□ -2.26
SSNA1O43805 RNU6-276P-201ENST00000516114 96 ntBASIC0.94□□□□□ -2.26
SSNA1O43805 RNU1-92P-201ENST00000517017 135 ntBASIC0.94□□□□□ -2.26
SSNA1O43805 RNA5SP404-201ENST00000517118 132 ntBASIC0.94□□□□□ -2.26
SSNA1O43805 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC0.94□□□□□ -2.26
SSNA1O43805 AC123904.2-201ENST00000548059 300 ntBASIC0.94□□□□□ -2.26
SSNA1O43805 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.94□□□□□ -2.26
SSNA1O43805 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC0.94□□□□□ -2.26
SSNA1O43805 MTND4LP25-201ENST00000570218 163 ntBASIC0.94□□□□□ -2.26
SSNA1O43805 AC015688.6-201ENST00000577737 104 ntBASIC0.94□□□□□ -2.26
SSNA1O43805 MIR548AC-201ENST00000585049 88 ntBASIC0.94□□□□□ -2.26
SSNA1O43805 MTND3P19-201ENST00000603825 345 ntBASIC0.94□□□□□ -2.26
SSNA1O43805 AC004492.1-201ENST00000607036 742 ntBASIC0.94□□□□□ -2.26
SSNA1O43805 U6.42-201ENST00000618440 107 ntBASIC0.94□□□□□ -2.26
SSNA1O43805 AP002782.1-201ENST00000623107 614 ntBASIC0.94□□□□□ -2.26
SSNA1O43805 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
SSNA1O43805 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
SSNA1O43805 SNORA70.7-201ENST00000384159 133 ntBASIC0.93□□□□□ -2.26
SSNA1O43805 RNU6-1179P-201ENST00000384667 107 ntBASIC0.93□□□□□ -2.26
SSNA1O43805 MIR520A-201ENST00000384862 85 ntBASIC0.93□□□□□ -2.26
SSNA1O43805 UBE2V1P2-201ENST00000397758 440 ntBASIC0.93□□□□□ -2.26
SSNA1O43805 RNA5SP508-201ENST00000411327 119 ntBASIC0.93□□□□□ -2.26
SSNA1O43805 AL161935.2-201ENST00000414627 60 ntBASIC0.93□□□□□ -2.26
SSNA1O43805 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.93□□□□□ -2.26
SSNA1O43805 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.93□□□□□ -2.26
SSNA1O43805 MTND1P30-201ENST00000441241 901 ntBASIC0.93□□□□□ -2.26
SSNA1O43805 AC007969.2-201ENST00000441891 191 ntBASIC0.93□□□□□ -2.26
SSNA1O43805 UBL5P3-201ENST00000475112 231 ntBASIC0.93□□□□□ -2.26
SSNA1O43805 AC134050.1-201ENST00000495088 933 ntBASIC0.93□□□□□ -2.26
SSNA1O43805 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.93□□□□□ -2.26
SSNA1O43805 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms