Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.42□□□□□ -2.18
KDELR3O43731 RPS15AP10-201ENST00000432472 382 ntBASIC1.42□□□□□ -2.18
KDELR3O43731 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.42□□□□□ -2.18
KDELR3O43731 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.42□□□□□ -2.18
KDELR3O43731 MTND1P12-201ENST00000455231 147 ntBASIC1.42□□□□□ -2.18
KDELR3O43731 RPL30P6-201ENST00000475925 342 ntBASIC1.42□□□□□ -2.18
KDELR3O43731 MTND2P33-201ENST00000506452 1031 ntBASIC1.42□□□□□ -2.18
KDELR3O43731 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.42□□□□□ -2.18
KDELR3O43731 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.42□□□□□ -2.18
KDELR3O43731 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.42□□□□□ -2.18
KDELR3O43731 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.42□□□□□ -2.18
KDELR3O43731 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
KDELR3O43731 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.42□□□□□ -2.18
KDELR3O43731 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.42□□□□□ -2.18
KDELR3O43731 MIR4422-201ENST00000581938 83 ntBASIC1.42□□□□□ -2.18
KDELR3O43731 MIR8074-201ENST00000615081 81 ntBASIC1.42□□□□□ -2.18
KDELR3O43731 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.42□□□□□ -2.18
KDELR3O43731 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
KDELR3O43731 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.42□□□□□ -2.18
KDELR3O43731 snoU2_19.1-201ENST00000362361 80 ntBASIC1.41□□□□□ -2.18
KDELR3O43731 Y_RNA.67-201ENST00000362870 100 ntBASIC1.41□□□□□ -2.18
KDELR3O43731 RNY4P16-201ENST00000364768 94 ntBASIC1.41□□□□□ -2.18
KDELR3O43731 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
KDELR3O43731 AC068050.1-201ENST00000394891 380 ntBASIC1.41□□□□□ -2.18
KDELR3O43731 Y_RNA.597-201ENST00000410463 100 ntBASIC1.41□□□□□ -2.18
KDELR3O43731 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.41□□□□□ -2.18
KDELR3O43731 AL603825.1-201ENST00000438481 80 ntBASIC1.41□□□□□ -2.18
KDELR3O43731 RPL22P17-201ENST00000438729 315 ntBASIC1.41□□□□□ -2.18
KDELR3O43731 AL357134.1-201ENST00000445848 426 ntBASIC1.41□□□□□ -2.18
KDELR3O43731 AL360221.1-201ENST00000445989 335 ntBASIC1.41□□□□□ -2.18
KDELR3O43731 snoU109.3-201ENST00000459477 145 ntBASIC1.41□□□□□ -2.18
KDELR3O43731 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.41□□□□□ -2.18
KDELR3O43731 AC025465.3-201ENST00000510570 311 ntBASIC1.41□□□□□ -2.18
KDELR3O43731 Y_RNA.687-201ENST00000516558 91 ntBASIC1.41□□□□□ -2.18
KDELR3O43731 RNU1-92P-201ENST00000517017 135 ntBASIC1.41□□□□□ -2.18
KDELR3O43731 AP003122.4-201ENST00000530980 758 ntBASIC1.41□□□□□ -2.18
KDELR3O43731 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.41□□□□□ -2.18
KDELR3O43731 ADI1P3-201ENST00000549509 470 ntBASIC1.41□□□□□ -2.18
KDELR3O43731 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.41□□□□□ -2.18
KDELR3O43731 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.41□□□□□ -2.18
KDELR3O43731 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.41□□□□□ -2.18
KDELR3O43731 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.41□□□□□ -2.18
KDELR3O43731 AC022022.2-201ENST00000602989 360 ntBASIC1.41□□□□□ -2.18
KDELR3O43731 AC008993.2-201ENST00000631744 806 ntBASIC1.41□□□□□ -2.18
KDELR3O43731 MTND4P16-201ENST00000466108 1367 ntBASIC1.41□□□□□ -2.18
KDELR3O43731 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
KDELR3O43731 RNU6-931P-201ENST00000363850 107 ntBASIC1.4□□□□□ -2.19
KDELR3O43731 RPS3AP36-201ENST00000398190 775 ntBASIC1.4□□□□□ -2.19
KDELR3O43731 AL357139.1-201ENST00000407792 426 ntBASIC1.4□□□□□ -2.19
KDELR3O43731 RNA5SP100-201ENST00000410903 110 ntBASIC1.4□□□□□ -2.19
KDELR3O43731 RNA5SP59-201ENST00000410922 110 ntBASIC1.4□□□□□ -2.19
KDELR3O43731 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.4□□□□□ -2.19
KDELR3O43731 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.4□□□□□ -2.19
KDELR3O43731 MTCYBP5-201ENST00000423752 1135 ntBASIC1.4□□□□□ -2.19
KDELR3O43731 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.4□□□□□ -2.19
KDELR3O43731 AL353752.1-201ENST00000454946 260 ntBASIC1.4□□□□□ -2.19
KDELR3O43731 SNORA43.2-201ENST00000516652 128 ntBASIC1.4□□□□□ -2.19
KDELR3O43731 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.4□□□□□ -2.19
KDELR3O43731 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.4□□□□□ -2.19
KDELR3O43731 MIR4421-201ENST00000578133 69 ntBASIC1.4□□□□□ -2.19
KDELR3O43731 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.4□□□□□ -2.19
KDELR3O43731 AL158032.1-201ENST00000605401 106 ntBASIC1.4□□□□□ -2.19
KDELR3O43731 AP000654.2-201ENST00000605633 586 ntBASIC1.4□□□□□ -2.19
KDELR3O43731 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.4□□□□□ -2.19
KDELR3O43731 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.4□□□□□ -2.19
KDELR3O43731 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
KDELR3O43731 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.4□□□□□ -2.19
KDELR3O43731 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.4□□□□□ -2.19
KDELR3O43731 AL161722.3-201ENST00000605789 2983 ntBASIC1.39□□□□□ -2.19
KDELR3O43731 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.39□□□□□ -2.19
KDELR3O43731 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
KDELR3O43731 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
KDELR3O43731 RAP1BP3-201ENST00000407180 549 ntBASIC1.39□□□□□ -2.19
KDELR3O43731 RPS15AP12-201ENST00000419498 388 ntBASIC1.39□□□□□ -2.19
KDELR3O43731 AC132942.1-201ENST00000486753 483 ntBASIC1.39□□□□□ -2.19
KDELR3O43731 RPL30P1-201ENST00000488676 339 ntBASIC1.39□□□□□ -2.19
KDELR3O43731 AC134050.1-201ENST00000495088 933 ntBASIC1.39□□□□□ -2.19
KDELR3O43731 AC114801.2-201ENST00000503825 781 ntBASIC1.39□□□□□ -2.19
KDELR3O43731 AC021146.2-201ENST00000504736 556 ntBASIC1.39□□□□□ -2.19
KDELR3O43731 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.39□□□□□ -2.19
KDELR3O43731 AC022616.6-201ENST00000520479 119 ntBASIC1.39□□□□□ -2.19
KDELR3O43731 AC087441.2-201ENST00000529141 262 ntBASIC1.39□□□□□ -2.19
KDELR3O43731 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.39□□□□□ -2.19
KDELR3O43731 AL354943.1-201ENST00000572103 781 ntBASIC1.39□□□□□ -2.19
KDELR3O43731 AC078795.2-201ENST00000602835 1252 ntBASIC1.39□□□□□ -2.19
KDELR3O43731 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.39□□□□□ -2.19
KDELR3O43731 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.39□□□□□ -2.19
KDELR3O43731 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.38□□□□□ -2.19
KDELR3O43731 SNORD56.1-201ENST00000362913 68 ntBASIC1.38□□□□□ -2.19
KDELR3O43731 SNORA7.1-201ENST00000363750 139 ntBASIC1.38□□□□□ -2.19
KDELR3O43731 RNU6-1179P-201ENST00000384667 107 ntBASIC1.38□□□□□ -2.19
KDELR3O43731 RNU6-955P-201ENST00000410497 104 ntBASIC1.38□□□□□ -2.19
KDELR3O43731 RN7SKP51-201ENST00000410781 304 ntBASIC1.38□□□□□ -2.19
KDELR3O43731 BTF3L4P1-201ENST00000413813 468 ntBASIC1.38□□□□□ -2.19
KDELR3O43731 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.38□□□□□ -2.19
KDELR3O43731 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC1.38□□□□□ -2.19
KDELR3O43731 AC009474.2-201ENST00000451383 136 ntBASIC1.38□□□□□ -2.19
KDELR3O43731 snoU13.9-201ENST00000458927 103 ntBASIC1.38□□□□□ -2.19
KDELR3O43731 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.38□□□□□ -2.19
KDELR3O43731 RNA5SP61-201ENST00000516453 100 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms