Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.02□□□□□ -2.09
CLDN3O15551 RNU6-685P-201ENST00000517088 95 ntBASIC2.02□□□□□ -2.09
CLDN3O15551 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.02□□□□□ -2.09
CLDN3O15551 OR5AL2P-201ENST00000532185 920 ntBASIC2.02□□□□□ -2.09
CLDN3O15551 AP002453.2-201ENST00000533503 320 ntBASIC2.02□□□□□ -2.09
CLDN3O15551 AC087883.1-201ENST00000551882 391 ntBASIC2.02□□□□□ -2.09
CLDN3O15551 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.02□□□□□ -2.09
CLDN3O15551 MIR4448-201ENST00000584360 86 ntBASIC2.02□□□□□ -2.09
CLDN3O15551 AC098848.2-201ENST00000588023 330 ntBASIC2.02□□□□□ -2.09
CLDN3O15551 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.02□□□□□ -2.09
CLDN3O15551 AL096840.1-201ENST00000603287 93 ntBASIC2.02□□□□□ -2.09
CLDN3O15551 APOOP1-201ENST00000604695 592 ntBASIC2.02□□□□□ -2.09
CLDN3O15551 Z82243.1-201ENST00000609432 473 ntBASIC2.02□□□□□ -2.09
CLDN3O15551 AL627230.6-201ENST00000611129 280 ntBASIC2.02□□□□□ -2.09
CLDN3O15551 MIR6715A-201ENST00000615929 79 ntBASIC2.02□□□□□ -2.09
CLDN3O15551 AC138649.3-201ENST00000622154 254 ntBASIC2.02□□□□□ -2.09
CLDN3O15551 AC093648.1-201ENST00000623546 606 ntBASIC2.02□□□□□ -2.09
CLDN3O15551 AC007494.3-201ENST00000624660 743 ntBASIC2.02□□□□□ -2.09
CLDN3O15551 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
CLDN3O15551 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CLDN3O15551 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.02□□□□□ -2.09
CLDN3O15551 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
CLDN3O15551 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
CLDN3O15551 RNU6-546P-201ENST00000383991 107 ntBASIC2.01□□□□□ -2.09
CLDN3O15551 MIR676-201ENST00000390702 67 ntBASIC2.01□□□□□ -2.09
CLDN3O15551 SNORA40.19-201ENST00000390846 128 ntBASIC2.01□□□□□ -2.09
CLDN3O15551 SUMO2P12-201ENST00000405924 140 ntBASIC2.01□□□□□ -2.09
CLDN3O15551 RNA5SP450-201ENST00000411206 102 ntBASIC2.01□□□□□ -2.09
CLDN3O15551 MTCYBP5-201ENST00000423752 1135 ntBASIC2.01□□□□□ -2.09
CLDN3O15551 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.01□□□□□ -2.09
CLDN3O15551 FDX1P2-201ENST00000450769 375 ntBASIC2.01□□□□□ -2.09
CLDN3O15551 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CLDN3O15551 MTND3P25-201ENST00000509243 135 ntBASIC2.01□□□□□ -2.09
CLDN3O15551 MTND1P22-201ENST00000510572 951 ntBASIC2.01□□□□□ -2.09
CLDN3O15551 RNU6-410P-201ENST00000517006 107 ntBASIC2.01□□□□□ -2.09
CLDN3O15551 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.01□□□□□ -2.09
CLDN3O15551 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.01□□□□□ -2.09
CLDN3O15551 OR11H5P-201ENST00000554039 926 ntBASIC2.01□□□□□ -2.09
CLDN3O15551 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.01□□□□□ -2.09
CLDN3O15551 AC104984.5-201ENST00000586878 94 ntBASIC2.01□□□□□ -2.09
CLDN3O15551 AC008749.1-201ENST00000597650 306 ntBASIC2.01□□□□□ -2.09
CLDN3O15551 MIR6845-201ENST00000613182 61 ntBASIC2.01□□□□□ -2.09
CLDN3O15551 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.01□□□□□ -2.09
CLDN3O15551 AC002543.1-201ENST00000299783 1954 ntBASIC2.01□□□□□ -2.09
CLDN3O15551 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.01□□□□□ -2.09
CLDN3O15551 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2□□□□□ -2.09
CLDN3O15551 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2□□□□□ -2.09
CLDN3O15551 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
CLDN3O15551 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2□□□□□ -2.09
CLDN3O15551 RNU5E-7P-201ENST00000365290 117 ntBASIC2□□□□□ -2.09
CLDN3O15551 SNORD115-7-201ENST00000365306 82 ntBASIC2□□□□□ -2.09
CLDN3O15551 SNORA26.9-201ENST00000391322 122 ntBASIC2□□□□□ -2.09
CLDN3O15551 CBX3P9-201ENST00000402326 552 ntBASIC2□□□□□ -2.09
CLDN3O15551 RNA5SP489-201ENST00000410986 109 ntBASIC2□□□□□ -2.09
CLDN3O15551 OR9R1P-201ENST00000412200 877 ntBASIC2□□□□□ -2.09
CLDN3O15551 HMGN1P14-201ENST00000412459 517 ntBASIC2□□□□□ -2.09
CLDN3O15551 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2□□□□□ -2.09
CLDN3O15551 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2□□□□□ -2.09
CLDN3O15551 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2□□□□□ -2.09
CLDN3O15551 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2□□□□□ -2.09
CLDN3O15551 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2□□□□□ -2.09
CLDN3O15551 snoU109.1-201ENST00000459339 135 ntBASIC2□□□□□ -2.09
CLDN3O15551 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2□□□□□ -2.09
CLDN3O15551 MRPS17P9-201ENST00000511924 393 ntBASIC2□□□□□ -2.09
CLDN3O15551 AC090572.1-201ENST00000519251 160 ntBASIC2□□□□□ -2.09
CLDN3O15551 CYCSP27-201ENST00000527643 293 ntBASIC2□□□□□ -2.09
CLDN3O15551 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2□□□□□ -2.09
CLDN3O15551 AC007375.1-201ENST00000554513 578 ntBASIC2□□□□□ -2.09
CLDN3O15551 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2□□□□□ -2.09
CLDN3O15551 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2□□□□□ -2.09
CLDN3O15551 AC011494.1-201ENST00000596454 237 ntBASIC2□□□□□ -2.09
CLDN3O15551 AC025811.1-201ENST00000604312 472 ntBASIC2□□□□□ -2.09
CLDN3O15551 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2□□□□□ -2.09
CLDN3O15551 MIR7843-201ENST00000622274 79 ntBASIC2□□□□□ -2.09
CLDN3O15551 snoU2_19.1-201ENST00000362361 80 ntBASIC1.99□□□□□ -2.09
CLDN3O15551 RNU6-78P-201ENST00000362897 107 ntBASIC1.99□□□□□ -2.09
CLDN3O15551 RNU6-1287P-201ENST00000362914 107 ntBASIC1.99□□□□□ -2.09
CLDN3O15551 SNORA16.1-201ENST00000364597 132 ntBASIC1.99□□□□□ -2.09
CLDN3O15551 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CLDN3O15551 RNU6-1060P-201ENST00000384664 107 ntBASIC1.99□□□□□ -2.09
CLDN3O15551 SNORA40.3-201ENST00000390964 122 ntBASIC1.99□□□□□ -2.09
CLDN3O15551 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.99□□□□□ -2.09
CLDN3O15551 OR6C66P-201ENST00000414917 930 ntBASIC1.99□□□□□ -2.09
CLDN3O15551 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.99□□□□□ -2.09
CLDN3O15551 RPL7P54-201ENST00000438336 674 ntBASIC1.99□□□□□ -2.09
CLDN3O15551 AL353689.1-201ENST00000438895 199 ntBASIC1.99□□□□□ -2.09
CLDN3O15551 AC007677.1-201ENST00000445757 515 ntBASIC1.99□□□□□ -2.09
CLDN3O15551 AL133217.1-201ENST00000450980 425 ntBASIC1.99□□□□□ -2.09
CLDN3O15551 RN7SL274P-201ENST00000492268 272 ntBASIC1.99□□□□□ -2.09
CLDN3O15551 RPL23AP63-201ENST00000498752 471 ntBASIC1.99□□□□□ -2.09
CLDN3O15551 MTCO3P9-201ENST00000506989 781 ntBASIC1.99□□□□□ -2.09
CLDN3O15551 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.99□□□□□ -2.09
CLDN3O15551 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.99□□□□□ -2.09
CLDN3O15551 RNU6-965P-201ENST00000516721 96 ntBASIC1.99□□□□□ -2.09
CLDN3O15551 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.99□□□□□ -2.09
CLDN3O15551 AK6P1-201ENST00000540219 478 ntBASIC1.99□□□□□ -2.09
CLDN3O15551 AC137800.2-201ENST00000574375 120 ntBASIC1.99□□□□□ -2.09
CLDN3O15551 AC073539.2-201ENST00000597113 165 ntBASIC1.99□□□□□ -2.09
CLDN3O15551 CLIC4P2-201ENST00000601934 717 ntBASIC1.99□□□□□ -2.09
CLDN3O15551 AL360219.1-201ENST00000610230 366 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms