Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 MIR29B2-201ENST00000385055 81 ntBASIC1.67□□□□□ -2.14
CLOCKO15516 SNORA26.9-201ENST00000391322 122 ntBASIC1.67□□□□□ -2.14
CLOCKO15516 RPS3AP36-201ENST00000398190 775 ntBASIC1.67□□□□□ -2.14
CLOCKO15516 MTCYBP5-201ENST00000423752 1135 ntBASIC1.67□□□□□ -2.14
CLOCKO15516 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.67□□□□□ -2.14
CLOCKO15516 AL360271.2-201ENST00000447710 161 ntBASIC1.67□□□□□ -2.14
CLOCKO15516 AC104564.1-201ENST00000493028 407 ntBASIC1.67□□□□□ -2.14
CLOCKO15516 AC107393.1-201ENST00000512403 346 ntBASIC1.67□□□□□ -2.14
CLOCKO15516 PTP4A1P4-201ENST00000512479 322 ntBASIC1.67□□□□□ -2.14
CLOCKO15516 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.67□□□□□ -2.14
CLOCKO15516 RN7SKP219-201ENST00000516825 296 ntBASIC1.67□□□□□ -2.14
CLOCKO15516 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.67□□□□□ -2.14
CLOCKO15516 MRPS36P3-201ENST00000519284 130 ntBASIC1.67□□□□□ -2.14
CLOCKO15516 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.67□□□□□ -2.14
CLOCKO15516 AK6P1-201ENST00000540219 478 ntBASIC1.67□□□□□ -2.14
CLOCKO15516 AC018630.3-201ENST00000542637 96 ntBASIC1.67□□□□□ -2.14
CLOCKO15516 HSBP1P1-201ENST00000555205 166 ntBASIC1.67□□□□□ -2.14
CLOCKO15516 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.67□□□□□ -2.14
CLOCKO15516 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.67□□□□□ -2.14
CLOCKO15516 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.67□□□□□ -2.14
CLOCKO15516 AC008521.1-201ENST00000587471 187 ntBASIC1.67□□□□□ -2.14
CLOCKO15516 AC012065.4-201ENST00000602445 679 ntBASIC1.67□□□□□ -2.14
CLOCKO15516 AC004908.3-201ENST00000610248 625 ntBASIC1.67□□□□□ -2.14
CLOCKO15516 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.67□□□□□ -2.14
CLOCKO15516 MIR7844-201ENST00000616161 122 ntBASIC1.67□□□□□ -2.14
CLOCKO15516 AC022960.3-201ENST00000619794 441 ntBASIC1.67□□□□□ -2.14
CLOCKO15516 ZNF72P-201ENST00000425869 1908 ntBASIC1.67□□□□□ -2.14
CLOCKO15516 RNU6-944P-201ENST00000364023 107 ntBASIC1.66□□□□□ -2.14
CLOCKO15516 RNU6-641P-201ENST00000384006 107 ntBASIC1.66□□□□□ -2.14
CLOCKO15516 RAP1BP3-201ENST00000407180 549 ntBASIC1.66□□□□□ -2.14
CLOCKO15516 SRIP3-201ENST00000413200 219 ntBASIC1.66□□□□□ -2.14
CLOCKO15516 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.66□□□□□ -2.14
CLOCKO15516 AC003989.2-201ENST00000440224 169 ntBASIC1.66□□□□□ -2.14
CLOCKO15516 TPT1P8-201ENST00000510120 555 ntBASIC1.66□□□□□ -2.14
CLOCKO15516 RNA5SP182-201ENST00000516064 82 ntBASIC1.66□□□□□ -2.14
CLOCKO15516 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.66□□□□□ -2.14
CLOCKO15516 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.66□□□□□ -2.14
CLOCKO15516 DUXAP5-201ENST00000529668 529 ntBASIC1.66□□□□□ -2.14
CLOCKO15516 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.66□□□□□ -2.14
CLOCKO15516 AC022880.1-201ENST00000534017 973 ntBASIC1.66□□□□□ -2.14
CLOCKO15516 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.66□□□□□ -2.14
CLOCKO15516 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.66□□□□□ -2.14
CLOCKO15516 BNIP3P25-201ENST00000596023 559 ntBASIC1.66□□□□□ -2.14
CLOCKO15516 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.66□□□□□ -2.14
CLOCKO15516 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.66□□□□□ -2.14
CLOCKO15516 RMST_7.1-201ENST00000621935 268 ntBASIC1.66□□□□□ -2.14
CLOCKO15516 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CLOCKO15516 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.66□□□□□ -2.14
CLOCKO15516 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
CLOCKO15516 SNORD56.1-201ENST00000362913 68 ntBASIC1.65□□□□□ -2.15
CLOCKO15516 RNU4-42P-201ENST00000364738 142 ntBASIC1.65□□□□□ -2.15
CLOCKO15516 RNU5E-5P-201ENST00000365379 116 ntBASIC1.65□□□□□ -2.15
CLOCKO15516 RNU6-61P-201ENST00000365528 109 ntBASIC1.65□□□□□ -2.15
CLOCKO15516 SNORD14D-201ENST00000384390 87 ntBASIC1.65□□□□□ -2.15
CLOCKO15516 RNU11-3P-201ENST00000391111 133 ntBASIC1.65□□□□□ -2.15
CLOCKO15516 RNA5SP111-201ENST00000411386 101 ntBASIC1.65□□□□□ -2.15
CLOCKO15516 EEF1A1P40-201ENST00000412883 573 ntBASIC1.65□□□□□ -2.15
CLOCKO15516 BTF3L4P1-201ENST00000413813 468 ntBASIC1.65□□□□□ -2.15
CLOCKO15516 BX510359.4-201ENST00000423750 193 ntBASIC1.65□□□□□ -2.15
CLOCKO15516 HMGB1P31-201ENST00000437242 427 ntBASIC1.65□□□□□ -2.15
CLOCKO15516 AC007677.1-201ENST00000445757 515 ntBASIC1.65□□□□□ -2.15
CLOCKO15516 AL353752.1-201ENST00000454946 260 ntBASIC1.65□□□□□ -2.15
CLOCKO15516 RBBP4P6-201ENST00000508098 202 ntBASIC1.65□□□□□ -2.15
CLOCKO15516 RNA5SP458-201ENST00000516188 119 ntBASIC1.65□□□□□ -2.15
CLOCKO15516 AC022878.1-201ENST00000530684 149 ntBASIC1.65□□□□□ -2.15
CLOCKO15516 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.65□□□□□ -2.15
CLOCKO15516 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.65□□□□□ -2.15
CLOCKO15516 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.65□□□□□ -2.15
CLOCKO15516 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.65□□□□□ -2.15
CLOCKO15516 MIR5692A1-201ENST00000580523 69 ntBASIC1.65□□□□□ -2.15
CLOCKO15516 HMGN1P30-201ENST00000589286 268 ntBASIC1.65□□□□□ -2.15
CLOCKO15516 BNIP3P39-201ENST00000601077 554 ntBASIC1.65□□□□□ -2.15
CLOCKO15516 AC112191.3-201ENST00000604371 277 ntBASIC1.65□□□□□ -2.15
CLOCKO15516 AL451064.1-201ENST00000607718 471 ntBASIC1.65□□□□□ -2.15
CLOCKO15516 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.65□□□□□ -2.15
CLOCKO15516 AC026585.1-201ENST00000619582 524 ntBASIC1.65□□□□□ -2.15
CLOCKO15516 AL159153.1-201ENST00000619688 317 ntBASIC1.65□□□□□ -2.15
CLOCKO15516 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
CLOCKO15516 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.64□□□□□ -2.15
CLOCKO15516 Y_RNA.22-201ENST00000362492 102 ntBASIC1.64□□□□□ -2.15
CLOCKO15516 RPL23AP32-201ENST00000395315 459 ntBASIC1.64□□□□□ -2.15
CLOCKO15516 RPL21P90-201ENST00000415692 466 ntBASIC1.64□□□□□ -2.15
CLOCKO15516 CYCSP49-201ENST00000420810 319 ntBASIC1.64□□□□□ -2.15
CLOCKO15516 EIF4EP2-201ENST00000422816 654 ntBASIC1.64□□□□□ -2.15
CLOCKO15516 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.64□□□□□ -2.15
CLOCKO15516 USP9YP12-201ENST00000450481 570 ntBASIC1.64□□□□□ -2.15
CLOCKO15516 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.64□□□□□ -2.15
CLOCKO15516 RPL30P12-201ENST00000474666 353 ntBASIC1.64□□□□□ -2.15
CLOCKO15516 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.64□□□□□ -2.15
CLOCKO15516 RNU1-86P-201ENST00000516108 154 ntBASIC1.64□□□□□ -2.15
CLOCKO15516 Y_RNA.672-201ENST00000516289 104 ntBASIC1.64□□□□□ -2.15
CLOCKO15516 RNU1-107P-201ENST00000516617 154 ntBASIC1.64□□□□□ -2.15
CLOCKO15516 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.64□□□□□ -2.15
CLOCKO15516 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.64□□□□□ -2.15
CLOCKO15516 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.64□□□□□ -2.15
CLOCKO15516 CBX3P4-201ENST00000538909 354 ntBASIC1.64□□□□□ -2.15
CLOCKO15516 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC1.64□□□□□ -2.15
CLOCKO15516 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.64□□□□□ -2.15
CLOCKO15516 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.64□□□□□ -2.15
CLOCKO15516 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 152.1 ms