Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.37□□□□□ -1.87
TRIM38O00635 AL669831.3-213ENST00000636676 183 ntBASIC3.37□□□□□ -1.87
TRIM38O00635 U6.99-201ENST00000637524 83 ntBASIC3.37□□□□□ -1.87
TRIM38O00635 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TRIM38O00635 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
TRIM38O00635 AL356274.2-201ENST00000624379 3752 ntBASIC3.37□□□□□ -1.87
TRIM38O00635 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM38O00635 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM38O00635 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.36□□□□□ -1.87
TRIM38O00635 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.36□□□□□ -1.87
TRIM38O00635 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.36□□□□□ -1.87
TRIM38O00635 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.36□□□□□ -1.87
TRIM38O00635 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM38O00635 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM38O00635 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM38O00635 RNA5SP383-201ENST00000362934 120 ntBASIC3.36□□□□□ -1.87
TRIM38O00635 RNA5SP374-201ENST00000362939 125 ntBASIC3.36□□□□□ -1.87
TRIM38O00635 RNU6-238P-201ENST00000363313 106 ntBASIC3.36□□□□□ -1.87
TRIM38O00635 SNORD14B-201ENST00000364533 90 ntBASIC3.36□□□□□ -1.87
TRIM38O00635 Y_RNA.463-201ENST00000384271 102 ntBASIC3.36□□□□□ -1.87
TRIM38O00635 Y_RNA.480-201ENST00000384364 102 ntBASIC3.36□□□□□ -1.87
TRIM38O00635 RNY1P14-201ENST00000384426 108 ntBASIC3.36□□□□□ -1.87
TRIM38O00635 Y_RNA.496-201ENST00000384444 101 ntBASIC3.36□□□□□ -1.87
TRIM38O00635 RNU6-1179P-201ENST00000384667 107 ntBASIC3.36□□□□□ -1.87
TRIM38O00635 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.36□□□□□ -1.87
TRIM38O00635 RN7SKP111-201ENST00000410349 271 ntBASIC3.36□□□□□ -1.87
TRIM38O00635 RNU6-607P-201ENST00000411283 108 ntBASIC3.36□□□□□ -1.87
TRIM38O00635 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.36□□□□□ -1.87
TRIM38O00635 AC126124.2-201ENST00000413542 321 ntBASIC3.36□□□□□ -1.87
TRIM38O00635 AC007560.1-201ENST00000426912 237 ntBASIC3.36□□□□□ -1.87
TRIM38O00635 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.36□□□□□ -1.87
TRIM38O00635 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.36□□□□□ -1.87
TRIM38O00635 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.36□□□□□ -1.87
TRIM38O00635 MTND1P17-201ENST00000448961 204 ntBASIC3.36□□□□□ -1.87
TRIM38O00635 AP001486.1-201ENST00000463339 476 ntBASIC3.36□□□□□ -1.87
TRIM38O00635 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.36□□□□□ -1.87
TRIM38O00635 AC068781.1-201ENST00000488231 618 ntBASIC3.36□□□□□ -1.87
TRIM38O00635 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
TRIM38O00635 MRPS35P2-201ENST00000508242 191 ntBASIC3.36□□□□□ -1.87
TRIM38O00635 SNORA25.10-201ENST00000515926 124 ntBASIC3.36□□□□□ -1.87
TRIM38O00635 RNU2-69P-201ENST00000516061 100 ntBASIC3.36□□□□□ -1.87
TRIM38O00635 AC107934.2-201ENST00000518653 310 ntBASIC3.36□□□□□ -1.87
TRIM38O00635 AC104027.1-201ENST00000521887 300 ntBASIC3.36□□□□□ -1.87
TRIM38O00635 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.36□□□□□ -1.87
TRIM38O00635 MIR5680-201ENST00000577577 84 ntBASIC3.36□□□□□ -1.87
TRIM38O00635 AC113195.1-201ENST00000579952 141 ntBASIC3.36□□□□□ -1.87
TRIM38O00635 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.36□□□□□ -1.87
TRIM38O00635 MTND4LP5-201ENST00000605152 292 ntBASIC3.36□□□□□ -1.87
TRIM38O00635 Z82243.1-201ENST00000609432 473 ntBASIC3.36□□□□□ -1.87
TRIM38O00635 AC107871.2-201ENST00000612894 502 ntBASIC3.36□□□□□ -1.87
TRIM38O00635 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.36□□□□□ -1.87
TRIM38O00635 CDC27P3-201ENST00000635418 1910 ntBASIC3.36□□□□□ -1.87
TRIM38O00635 MTND5P27-201ENST00000428871 1720 ntBASIC3.36□□□□□ -1.87
TRIM38O00635 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.35□□□□□ -1.87
TRIM38O00635 AC121333.1-201ENST00000567488 2709 ntBASIC3.35□□□□□ -1.87
TRIM38O00635 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM38O00635 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM38O00635 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.35□□□□□ -1.87
TRIM38O00635 RNU1-105P-201ENST00000363470 161 ntBASIC3.35□□□□□ -1.87
TRIM38O00635 RNU6-209P-201ENST00000384118 107 ntBASIC3.35□□□□□ -1.87
TRIM38O00635 Y_RNA.482-201ENST00000384377 111 ntBASIC3.35□□□□□ -1.87
TRIM38O00635 Y_RNA.512-201ENST00000384518 102 ntBASIC3.35□□□□□ -1.87
TRIM38O00635 RNU6-601P-201ENST00000384540 107 ntBASIC3.35□□□□□ -1.87
TRIM38O00635 SNORA16.2-201ENST00000390991 127 ntBASIC3.35□□□□□ -1.87
TRIM38O00635 SNORD70.1-201ENST00000391007 85 ntBASIC3.35□□□□□ -1.87
TRIM38O00635 Y_RNA.645-201ENST00000391229 102 ntBASIC3.35□□□□□ -1.87
TRIM38O00635 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM38O00635 RPL7P10-201ENST00000417407 739 ntBASIC3.35□□□□□ -1.87
TRIM38O00635 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.35□□□□□ -1.87
TRIM38O00635 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.35□□□□□ -1.87
TRIM38O00635 Z75741.1-201ENST00000446793 314 ntBASIC3.35□□□□□ -1.87
TRIM38O00635 AL049873.1-201ENST00000480540 376 ntBASIC3.35□□□□□ -1.87
TRIM38O00635 AC011005.2-201ENST00000487324 359 ntBASIC3.35□□□□□ -1.87
TRIM38O00635 RPS29P20-201ENST00000489592 171 ntBASIC3.35□□□□□ -1.87
TRIM38O00635 Y_RNA.654-201ENST00000497848 106 ntBASIC3.35□□□□□ -1.87
TRIM38O00635 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM38O00635 RNU6-256P-201ENST00000516747 97 ntBASIC3.35□□□□□ -1.87
TRIM38O00635 AC087854.1-201ENST00000519706 414 ntBASIC3.35□□□□□ -1.87
TRIM38O00635 AC090136.1-201ENST00000520009 240 ntBASIC3.35□□□□□ -1.87
TRIM38O00635 AC068657.1-201ENST00000520807 306 ntBASIC3.35□□□□□ -1.87
TRIM38O00635 AC023442.1-201ENST00000531247 422 ntBASIC3.35□□□□□ -1.87
TRIM38O00635 AP000763.2-201ENST00000540641 163 ntBASIC3.35□□□□□ -1.87
TRIM38O00635 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM38O00635 CYCSP39-201ENST00000565821 309 ntBASIC3.35□□□□□ -1.87
TRIM38O00635 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM38O00635 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM38O00635 PRR13P7-201ENST00000605538 430 ntBASIC3.35□□□□□ -1.87
TRIM38O00635 U2.17-201ENST00000611454 95 ntBASIC3.35□□□□□ -1.87
TRIM38O00635 AC078938.1-201ENST00000620993 318 ntBASIC3.35□□□□□ -1.87
TRIM38O00635 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.35□□□□□ -1.87
TRIM38O00635 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.35□□□□□ -1.87
TRIM38O00635 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.35□□□□□ -1.87
TRIM38O00635 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
TRIM38O00635 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.35□□□□□ -1.87
TRIM38O00635 MFSD8-233ENST00000641482 4860 ntBASIC3.35□□□□□ -1.87
TRIM38O00635 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM38O00635 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.34□□□□□ -1.87
TRIM38O00635 AL035425.3-201ENST00000564206 4996 ntBASIC3.34□□□□□ -1.87
TRIM38O00635 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TRIM38O00635 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms