Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 PGBD4P5-201ENST00000445958 426 ntBASIC0.19□□□□□ -2.38
CACNA1AO00555 AC068135.1-201ENST00000446164 246 ntBASIC0.19□□□□□ -2.38
CACNA1AO00555 OFD1P3Y-201ENST00000453312 783 ntBASIC0.19□□□□□ -2.38
CACNA1AO00555 AC114982.2-201ENST00000461396 358 ntBASIC0.19□□□□□ -2.38
CACNA1AO00555 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.19□□□□□ -2.38
CACNA1AO00555 AC117525.1-201ENST00000515228 503 ntBASIC0.19□□□□□ -2.38
CACNA1AO00555 RNA5SP137-201ENST00000516833 135 ntBASIC0.19□□□□□ -2.38
CACNA1AO00555 MRPS36P4-201ENST00000534436 298 ntBASIC0.19□□□□□ -2.38
CACNA1AO00555 AP005229.2-201ENST00000609980 697 ntBASIC0.19□□□□□ -2.38
CACNA1AO00555 UBE2Q2P6-201ENST00000612666 153 ntBASIC0.19□□□□□ -2.38
CACNA1AO00555 AC040896.1-201ENST00000613819 479 ntBASIC0.19□□□□□ -2.38
CACNA1AO00555 MIR6738-201ENST00000619620 64 ntBASIC0.19□□□□□ -2.38
CACNA1AO00555 MTND4P14-201ENST00000435799 1354 ntBASIC0.19□□□□□ -2.38
CACNA1AO00555 Y_RNA.246-201ENST00000364495 108 ntBASIC0.19□□□□□ -2.38
CACNA1AO00555 MIR525-201ENST00000384978 85 ntBASIC0.19□□□□□ -2.38
CACNA1AO00555 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
CACNA1AO00555 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.19□□□□□ -2.38
CACNA1AO00555 AC096920.1-201ENST00000423991 241 ntBASIC0.19□□□□□ -2.38
CACNA1AO00555 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.19□□□□□ -2.38
CACNA1AO00555 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC0.19□□□□□ -2.38
CACNA1AO00555 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.19□□□□□ -2.38
CACNA1AO00555 SMURF2P1-201ENST00000514992 481 ntBASIC0.19□□□□□ -2.38
CACNA1AO00555 AC022447.1-201ENST00000515358 464 ntBASIC0.19□□□□□ -2.38
CACNA1AO00555 RNA5SP227-201ENST00000516184 113 ntBASIC0.19□□□□□ -2.38
CACNA1AO00555 RNU4-18P-201ENST00000516751 149 ntBASIC0.19□□□□□ -2.38
CACNA1AO00555 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.19□□□□□ -2.38
CACNA1AO00555 MAL2-206ENST00000522187 547 ntTSL 4 BASIC0.19□□□□□ -2.38
CACNA1AO00555 AC022616.2-201ENST00000523185 300 ntBASIC0.19□□□□□ -2.38
CACNA1AO00555 AC006199.1-201ENST00000548728 219 ntBASIC0.19□□□□□ -2.38
CACNA1AO00555 ADAM3B-201ENST00000569937 840 ntBASIC0.19□□□□□ -2.38
CACNA1AO00555 EIF1P4-201ENST00000572664 335 ntBASIC0.19□□□□□ -2.38
CACNA1AO00555 AC025627.3-201ENST00000582078 182 ntBASIC0.19□□□□□ -2.38
CACNA1AO00555 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC0.19□□□□□ -2.38
CACNA1AO00555 NIFKP6-201ENST00000598115 845 ntBASIC0.19□□□□□ -2.38
CACNA1AO00555 BNIP3P23-201ENST00000599655 511 ntBASIC0.19□□□□□ -2.38
CACNA1AO00555 AP003973.1-201ENST00000604639 691 ntBASIC0.19□□□□□ -2.38
CACNA1AO00555 AL161729.4-201ENST00000604650 476 ntBASIC0.19□□□□□ -2.38
CACNA1AO00555 AC092354.1-201ENST00000606057 376 ntBASIC0.19□□□□□ -2.38
CACNA1AO00555 AC004908.3-201ENST00000610248 625 ntBASIC0.19□□□□□ -2.38
CACNA1AO00555 AC011939.3-201ENST00000613686 466 ntBASIC0.19□□□□□ -2.38
CACNA1AO00555 AL109659.3-201ENST00000624985 950 ntBASIC0.19□□□□□ -2.38
CACNA1AO00555 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.19□□□□□ -2.38
CACNA1AO00555 AC017104.5-201ENST00000637647 639 ntBASIC0.19□□□□□ -2.38
CACNA1AO00555 RNU5E-1-201ENST00000362477 120 ntBASIC0.18□□□□□ -2.38
CACNA1AO00555 Y_RNA.57-201ENST00000362806 113 ntBASIC0.18□□□□□ -2.38
CACNA1AO00555 RNU1-124P-201ENST00000363861 145 ntBASIC0.18□□□□□ -2.38
CACNA1AO00555 TAF9BP2-201ENST00000400856 499 ntBASIC0.18□□□□□ -2.38
CACNA1AO00555 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.18□□□□□ -2.38
CACNA1AO00555 AC138623.1-201ENST00000418060 216 ntBASIC0.18□□□□□ -2.38
CACNA1AO00555 MTCO3P17-201ENST00000443775 513 ntBASIC0.18□□□□□ -2.38
CACNA1AO00555 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC0.18□□□□□ -2.38
CACNA1AO00555 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.18□□□□□ -2.38
CACNA1AO00555 AC025459.1-201ENST00000504072 156 ntBASIC0.18□□□□□ -2.38
CACNA1AO00555 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC0.18□□□□□ -2.38
CACNA1AO00555 CYB5AP5-201ENST00000549779 389 ntBASIC0.18□□□□□ -2.38
CACNA1AO00555 AC233702.2-202ENST00000562547 291 ntBASIC0.18□□□□□ -2.38
CACNA1AO00555 AC026271.5-201ENST00000577873 130 ntBASIC0.18□□□□□ -2.38
CACNA1AO00555 AL021879.1-201ENST00000611756 288 ntBASIC0.18□□□□□ -2.38
CACNA1AO00555 MIR8074-201ENST00000615081 81 ntBASIC0.18□□□□□ -2.38
CACNA1AO00555 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.18□□□□□ -2.38
CACNA1AO00555 AC008443.7-201ENST00000622195 246 ntBASIC0.18□□□□□ -2.38
CACNA1AO00555 AC090772.4-201ENST00000623599 362 ntBASIC0.18□□□□□ -2.38
CACNA1AO00555 AL590396.4-201ENST00000636779 956 ntBASIC0.18□□□□□ -2.38
CACNA1AO00555 U6.107-201ENST00000637108 79 ntBASIC0.18□□□□□ -2.38
CACNA1AO00555 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
CACNA1AO00555 ZNF680P1-201ENST00000436625 1469 ntBASIC0.18□□□□□ -2.38
CACNA1AO00555 SNORD114-16-201ENST00000363044 70 ntBASIC0.18□□□□□ -2.38
CACNA1AO00555 RNU6-414P-201ENST00000363705 104 ntBASIC0.18□□□□□ -2.38
CACNA1AO00555 SNORA25B-201ENST00000365507 128 ntBASIC0.18□□□□□ -2.38
CACNA1AO00555 RNU6-338P-201ENST00000383888 105 ntBASIC0.18□□□□□ -2.38
CACNA1AO00555 RNU6-921P-201ENST00000384361 107 ntBASIC0.18□□□□□ -2.38
CACNA1AO00555 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.18□□□□□ -2.38
CACNA1AO00555 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.18□□□□□ -2.38
CACNA1AO00555 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.18□□□□□ -2.38
CACNA1AO00555 MTCO2P20-201ENST00000437339 673 ntBASIC0.18□□□□□ -2.38
CACNA1AO00555 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.18□□□□□ -2.38
CACNA1AO00555 AC006512.1-201ENST00000468816 291 ntBASIC0.18□□□□□ -2.38
CACNA1AO00555 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.18□□□□□ -2.38
CACNA1AO00555 SNORD116-28-201ENST00000516123 91 ntBASIC0.18□□□□□ -2.38
CACNA1AO00555 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.18□□□□□ -2.38
CACNA1AO00555 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC0.18□□□□□ -2.38
CACNA1AO00555 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.18□□□□□ -2.38
CACNA1AO00555 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.18□□□□□ -2.38
CACNA1AO00555 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC0.18□□□□□ -2.38
CACNA1AO00555 MIR4422-201ENST00000581938 83 ntBASIC0.18□□□□□ -2.38
CACNA1AO00555 AC018462.2-201ENST00000605375 395 ntBASIC0.18□□□□□ -2.38
CACNA1AO00555 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC0.18□□□□□ -2.38
CACNA1AO00555 AC080013.4-201ENST00000607624 649 ntBASIC0.18□□□□□ -2.38
CACNA1AO00555 AC016252.1-201ENST00000609721 474 ntBASIC0.18□□□□□ -2.38
CACNA1AO00555 AC009269.6-201ENST00000621778 588 ntBASIC0.18□□□□□ -2.38
CACNA1AO00555 AC092125.1-201ENST00000562568 1995 ntBASIC0.18□□□□□ -2.38
CACNA1AO00555 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
CACNA1AO00555 ENSAP3-201ENST00000312710 333 ntBASIC0.17□□□□□ -2.38
CACNA1AO00555 AL117342.1-201ENST00000404861 406 ntBASIC0.17□□□□□ -2.38
CACNA1AO00555 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC0.17□□□□□ -2.38
CACNA1AO00555 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC0.17□□□□□ -2.38
CACNA1AO00555 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.17□□□□□ -2.38
CACNA1AO00555 SCARNA3-201ENST00000517097 143 ntBASIC0.17□□□□□ -2.38
CACNA1AO00555 RNU2-12P-201ENST00000517216 168 ntBASIC0.17□□□□□ -2.38
CACNA1AO00555 AC104417.1-201ENST00000523974 751 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms