Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC090515.1-201ENST00000465295 476 ntBASIC2□□□□□ -2.09
TRIM49D1C9J1S8 GMFBP1-201ENST00000467831 427 ntBASIC2□□□□□ -2.09
TRIM49D1C9J1S8 AC107626.1-201ENST00000471084 183 ntBASIC2□□□□□ -2.09
TRIM49D1C9J1S8 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2□□□□□ -2.09
TRIM49D1C9J1S8 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2□□□□□ -2.09
TRIM49D1C9J1S8 OR5AQ1P-201ENST00000527596 927 ntBASIC2□□□□□ -2.09
TRIM49D1C9J1S8 AC026464.5-201ENST00000562497 722 ntBASIC2□□□□□ -2.09
TRIM49D1C9J1S8 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2□□□□□ -2.09
TRIM49D1C9J1S8 MIR5089-201ENST00000580047 84 ntBASIC2□□□□□ -2.09
TRIM49D1C9J1S8 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2□□□□□ -2.09
TRIM49D1C9J1S8 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2□□□□□ -2.09
TRIM49D1C9J1S8 AC005261.5-201ENST00000596280 355 ntBASIC2□□□□□ -2.09
TRIM49D1C9J1S8 BNIP3P9-201ENST00000603714 553 ntBASIC2□□□□□ -2.09
TRIM49D1C9J1S8 Y_RNA.783-201ENST00000613546 102 ntBASIC2□□□□□ -2.09
TRIM49D1C9J1S8 YWHAEP7-203ENST00000622054 312 ntBASIC2□□□□□ -2.09
TRIM49D1C9J1S8 MIR6873-201ENST00000622788 63 ntBASIC2□□□□□ -2.09
TRIM49D1C9J1S8 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2□□□□□ -2.09
TRIM49D1C9J1S8 MIR3688-2-201ENST00000636963 87 ntBASIC2□□□□□ -2.09
TRIM49D1C9J1S8 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2□□□□□ -2.09
TRIM49D1C9J1S8 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
TRIM49D1C9J1S8 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2□□□□□ -2.09
TRIM49D1C9J1S8 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2□□□□□ -2.09
TRIM49D1C9J1S8 AL596028.1-201ENST00000326971 197 ntBASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 RNU6-1085P-201ENST00000363576 107 ntBASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 RNU6-898P-201ENST00000365627 104 ntBASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 RNU1-73P-201ENST00000383971 164 ntBASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 RNU2-3P-201ENST00000410144 191 ntBASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 OR9R1P-201ENST00000412200 877 ntBASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 USP9YP6-201ENST00000413550 854 ntBASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 CYCSP33-201ENST00000414485 327 ntBASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 RPL30P16-201ENST00000419341 429 ntBASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 PGBD4P6-201ENST00000421501 610 ntBASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 AL353729.1-201ENST00000425044 720 ntBASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 AC007560.1-201ENST00000426912 237 ntBASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 AL590383.1-201ENST00000428602 75 ntBASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 NFU1P2-201ENST00000448700 469 ntBASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 AC083798.1-201ENST00000472671 131 ntBASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 TRBV12-1-201ENST00000479785 344 ntBASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 RNU6-581P-201ENST00000516214 105 ntBASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 RNU6-1281P-201ENST00000516223 105 ntBASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 RNU6-1282P-201ENST00000516735 96 ntBASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 RNU6-1183P-201ENST00000517054 60 ntBASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 MTND1P5-201ENST00000517906 940 ntBASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 MTND1P35-201ENST00000526739 508 ntBASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 RANP3-201ENST00000530970 276 ntBASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 OR11H5P-201ENST00000554039 926 ntBASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 AC092325.1-201ENST00000566449 554 ntBASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 AC009127.3-201ENST00000570531 403 ntBASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 MIR4424-201ENST00000585257 86 ntBASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 AC010525.2-201ENST00000590920 195 ntBASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 RPS15AP11-201ENST00000594193 385 ntBASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 APOOP1-201ENST00000604695 592 ntBASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 CTHRC1P1-201ENST00000605383 469 ntBASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 AC007014.2-201ENST00000615581 479 ntBASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 AC024614.3-201ENST00000637860 256 ntBASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 AC004944.1-201ENST00000517807 3059 ntBASIC1.99□□□□□ -2.09
TRIM49D1C9J1S8 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 SNORD14B-201ENST00000364533 90 ntBASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 Y_RNA.255-201ENST00000364581 97 ntBASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 RNU6-534P-201ENST00000364877 106 ntBASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 Y_RNA.390-201ENST00000383932 102 ntBASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 RNU6-1179P-201ENST00000384667 107 ntBASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 SNORD70.1-201ENST00000391007 85 ntBASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 SNORA40C-201ENST00000391285 128 ntBASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 AL023284.1-201ENST00000403956 276 ntBASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 SUMO2P12-201ENST00000405924 140 ntBASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 Y_RNA.615-201ENST00000410769 117 ntBASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 MTCYBP5-201ENST00000423752 1135 ntBASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 AL591704.1-201ENST00000432574 275 ntBASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 AC098831.1-201ENST00000440661 216 ntBASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 IFNA11P-201ENST00000446352 526 ntBASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 AL356010.1-201ENST00000456364 102 ntBASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 RNU6-953P-201ENST00000459154 107 ntBASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 AC117503.1-201ENST00000472241 394 ntBASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 AL163973.1-201ENST00000484753 577 ntBASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.98□□□□□ -2.09
TRIM49D1C9J1S8 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 147.9 ms