Protein–RNA interactions for Protein: B0FP48

UPK3BL1, Uroplakin-3b-like protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1B0FP48 AC074117.2-201ENST00000417130 397 ntBASIC4.04□□□□□ -1.76
UPK3BL1B0FP48 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.04□□□□□ -1.76
UPK3BL1B0FP48 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.04□□□□□ -1.76
UPK3BL1B0FP48 AC125238.1-201ENST00000448842 249 ntBASIC4.04□□□□□ -1.76
UPK3BL1B0FP48 AC012308.1-201ENST00000451232 178 ntBASIC4.04□□□□□ -1.76
UPK3BL1B0FP48 AL136097.1-201ENST00000456945 913 ntBASIC4.04□□□□□ -1.76
UPK3BL1B0FP48 RPL30P14-201ENST00000482744 348 ntBASIC4.04□□□□□ -1.76
UPK3BL1B0FP48 RNA5SP309-201ENST00000516670 106 ntBASIC4.04□□□□□ -1.76
UPK3BL1B0FP48 CYCSP30-201ENST00000546447 172 ntBASIC4.04□□□□□ -1.76
UPK3BL1B0FP48 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.04□□□□□ -1.76
UPK3BL1B0FP48 AC130289.1-201ENST00000577321 73 ntBASIC4.04□□□□□ -1.76
UPK3BL1B0FP48 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.04□□□□□ -1.76
UPK3BL1B0FP48 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.04□□□□□ -1.76
UPK3BL1B0FP48 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
UPK3BL1B0FP48 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.03□□□□□ -1.76
UPK3BL1B0FP48 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.03□□□□□ -1.76
UPK3BL1B0FP48 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.03□□□□□ -1.76
UPK3BL1B0FP48 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
UPK3BL1B0FP48 SNORD113-8-201ENST00000363497 74 ntBASIC4.03□□□□□ -1.76
UPK3BL1B0FP48 RNU1-100P-201ENST00000365255 165 ntBASIC4.03□□□□□ -1.76
UPK3BL1B0FP48 SNORD116-20-201ENST00000384529 92 ntBASIC4.03□□□□□ -1.76
UPK3BL1B0FP48 Y_RNA.541-201ENST00000384640 113 ntBASIC4.03□□□□□ -1.76
UPK3BL1B0FP48 RNU4-61P-201ENST00000411243 107 ntBASIC4.03□□□□□ -1.76
UPK3BL1B0FP48 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.03□□□□□ -1.76
UPK3BL1B0FP48 PIGPP3-201ENST00000425307 415 ntBASIC4.03□□□□□ -1.76
UPK3BL1B0FP48 TBCAP1-201ENST00000436520 327 ntBASIC4.03□□□□□ -1.76
UPK3BL1B0FP48 AC007969.2-201ENST00000441891 191 ntBASIC4.03□□□□□ -1.76
UPK3BL1B0FP48 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.03□□□□□ -1.76
UPK3BL1B0FP48 AL139109.1-201ENST00000455491 297 ntBASIC4.03□□□□□ -1.76
UPK3BL1B0FP48 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.03□□□□□ -1.76
UPK3BL1B0FP48 AP006245.1-201ENST00000522549 120 ntBASIC4.03□□□□□ -1.76
UPK3BL1B0FP48 AC023824.2-201ENST00000566185 400 ntBASIC4.03□□□□□ -1.76
UPK3BL1B0FP48 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.03□□□□□ -1.76
UPK3BL1B0FP48 AC097372.5-201ENST00000623665 376 ntBASIC4.03□□□□□ -1.76
UPK3BL1B0FP48 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.03□□□□□ -1.76
UPK3BL1B0FP48 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.03□□□□□ -1.76
UPK3BL1B0FP48 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
UPK3BL1B0FP48 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
UPK3BL1B0FP48 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
UPK3BL1B0FP48 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.02□□□□□ -1.77
UPK3BL1B0FP48 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.02□□□□□ -1.77
UPK3BL1B0FP48 AC068254.2-201ENST00000623938 3577 ntBASIC4.02□□□□□ -1.77
UPK3BL1B0FP48 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
UPK3BL1B0FP48 ADAM3A-203ENST00000461344 2157 ntBASIC4.02□□□□□ -1.77
UPK3BL1B0FP48 RNU5B-2P-201ENST00000363036 113 ntBASIC4.02□□□□□ -1.77
UPK3BL1B0FP48 RNU6-280P-201ENST00000364145 104 ntBASIC4.02□□□□□ -1.77
UPK3BL1B0FP48 SNORA29-201ENST00000384183 140 ntBASIC4.02□□□□□ -1.77
UPK3BL1B0FP48 RNU6-843P-201ENST00000384454 104 ntBASIC4.02□□□□□ -1.77
UPK3BL1B0FP48 MTHFD2P2-201ENST00000407725 247 ntBASIC4.02□□□□□ -1.77
UPK3BL1B0FP48 AC099548.1-201ENST00000421443 426 ntBASIC4.02□□□□□ -1.77
UPK3BL1B0FP48 RPL23AP82-202ENST00000427528 469 ntBASIC4.02□□□□□ -1.77
UPK3BL1B0FP48 AC011742.1-201ENST00000431448 434 ntBASIC4.02□□□□□ -1.77
UPK3BL1B0FP48 AL445305.1-201ENST00000432577 575 ntBASIC4.02□□□□□ -1.77
UPK3BL1B0FP48 RPS15AP7-201ENST00000439294 405 ntBASIC4.02□□□□□ -1.77
UPK3BL1B0FP48 AC087477.1-201ENST00000465747 340 ntBASIC4.02□□□□□ -1.77
UPK3BL1B0FP48 RN7SL271P-201ENST00000487601 295 ntBASIC4.02□□□□□ -1.77
UPK3BL1B0FP48 RPS27AP10-201ENST00000496103 208 ntBASIC4.02□□□□□ -1.77
UPK3BL1B0FP48 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.02□□□□□ -1.77
UPK3BL1B0FP48 RNU6-1114P-201ENST00000516022 107 ntBASIC4.02□□□□□ -1.77
UPK3BL1B0FP48 RNU6-496P-201ENST00000516145 99 ntBASIC4.02□□□□□ -1.77
UPK3BL1B0FP48 RNU1-95P-201ENST00000516357 160 ntBASIC4.02□□□□□ -1.77
UPK3BL1B0FP48 RNU1-128P-201ENST00000516704 160 ntBASIC4.02□□□□□ -1.77
UPK3BL1B0FP48 RNU6-928P-201ENST00000516876 104 ntBASIC4.02□□□□□ -1.77
UPK3BL1B0FP48 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.02□□□□□ -1.77
UPK3BL1B0FP48 FTX_2.1-201ENST00000618816 94 ntBASIC4.02□□□□□ -1.77
UPK3BL1B0FP48 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.02□□□□□ -1.77
UPK3BL1B0FP48 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
UPK3BL1B0FP48 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.02□□□□□ -1.77
UPK3BL1B0FP48 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
UPK3BL1B0FP48 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
UPK3BL1B0FP48 HSPA8P1-201ENST00000425843 1833 ntBASIC4.02□□□□□ -1.77
UPK3BL1B0FP48 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.02□□□□□ -1.77
UPK3BL1B0FP48 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
UPK3BL1B0FP48 AC011266.1-201ENST00000624119 3569 ntBASIC4.02□□□□□ -1.77
UPK3BL1B0FP48 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
UPK3BL1B0FP48 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
UPK3BL1B0FP48 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
UPK3BL1B0FP48 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.01□□□□□ -1.77
UPK3BL1B0FP48 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
UPK3BL1B0FP48 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
UPK3BL1B0FP48 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
UPK3BL1B0FP48 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.01□□□□□ -1.77
UPK3BL1B0FP48 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.01□□□□□ -1.77
UPK3BL1B0FP48 RNU6-222P-201ENST00000362438 107 ntBASIC4.01□□□□□ -1.77
UPK3BL1B0FP48 RNU6-1266P-201ENST00000362794 105 ntBASIC4.01□□□□□ -1.77
UPK3BL1B0FP48 Y_RNA.65-201ENST00000362846 100 ntBASIC4.01□□□□□ -1.77
UPK3BL1B0FP48 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.01□□□□□ -1.77
UPK3BL1B0FP48 Y_RNA.180-201ENST00000363867 113 ntBASIC4.01□□□□□ -1.77
UPK3BL1B0FP48 RNA5SP72-201ENST00000364442 117 ntBASIC4.01□□□□□ -1.77
UPK3BL1B0FP48 RNU6-318P-201ENST00000384283 103 ntBASIC4.01□□□□□ -1.77
UPK3BL1B0FP48 RNU6-937P-201ENST00000384325 106 ntBASIC4.01□□□□□ -1.77
UPK3BL1B0FP48 MIR1251-201ENST00000408552 70 ntBASIC4.01□□□□□ -1.77
UPK3BL1B0FP48 RN7SKP156-201ENST00000410308 342 ntBASIC4.01□□□□□ -1.77
UPK3BL1B0FP48 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.01□□□□□ -1.77
UPK3BL1B0FP48 AL139156.1-201ENST00000412785 841 ntBASIC4.01□□□□□ -1.77
UPK3BL1B0FP48 AL138752.1-201ENST00000452964 351 ntBASIC4.01□□□□□ -1.77
UPK3BL1B0FP48 AF186996.7-201ENST00000492781 209 ntBASIC4.01□□□□□ -1.77
UPK3BL1B0FP48 AC025554.1-201ENST00000505641 188 ntBASIC4.01□□□□□ -1.77
UPK3BL1B0FP48 AC110768.1-201ENST00000509222 400 ntBASIC4.01□□□□□ -1.77
UPK3BL1B0FP48 RNU6-1198P-201ENST00000516904 67 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 145.9 ms