Protein–RNA interactions for Protein: A6NCW7

USP17L4, Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L4A6NCW7 AC007179.3-201ENST00000604976 235 ntBASIC4.79□□□□□ -1.64
USP17L4A6NCW7 AC012603.1-201ENST00000606424 528 ntBASIC4.79□□□□□ -1.64
USP17L4A6NCW7 U2.22-201ENST00000636441 106 ntBASIC4.79□□□□□ -1.64
USP17L4A6NCW7 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.79□□□□□ -1.64
USP17L4A6NCW7 AL079305.1-201ENST00000623159 3008 ntBASIC4.79□□□□□ -1.64
USP17L4A6NCW7 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP17L4A6NCW7 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.79□□□□□ -1.64
USP17L4A6NCW7 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
USP17L4A6NCW7 HAUS6P2-201ENST00000433254 2404 ntBASIC4.78□□□□□ -1.64
USP17L4A6NCW7 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
USP17L4A6NCW7 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
USP17L4A6NCW7 AC007656.2-201ENST00000624902 4547 ntBASIC4.78□□□□□ -1.64
USP17L4A6NCW7 SNORD115-8-201ENST00000363856 82 ntBASIC4.78□□□□□ -1.64
USP17L4A6NCW7 SNORD115-38-201ENST00000365037 82 ntBASIC4.78□□□□□ -1.64
USP17L4A6NCW7 U1.1-201ENST00000384101 164 ntBASIC4.78□□□□□ -1.64
USP17L4A6NCW7 RNU6-281P-201ENST00000384212 103 ntBASIC4.78□□□□□ -1.64
USP17L4A6NCW7 Y_RNA.464-201ENST00000384282 110 ntBASIC4.78□□□□□ -1.64
USP17L4A6NCW7 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.78□□□□□ -1.64
USP17L4A6NCW7 COX6CP14-201ENST00000469580 174 ntBASIC4.78□□□□□ -1.64
USP17L4A6NCW7 RPL26P26-201ENST00000480251 434 ntBASIC4.78□□□□□ -1.64
USP17L4A6NCW7 RNU6-58P-201ENST00000517143 103 ntBASIC4.78□□□□□ -1.64
USP17L4A6NCW7 SNORA31.23-201ENST00000517219 133 ntBASIC4.78□□□□□ -1.64
USP17L4A6NCW7 AC024405.2-202ENST00000532731 184 ntBASIC4.78□□□□□ -1.64
USP17L4A6NCW7 UBL5P4-201ENST00000562584 236 ntBASIC4.78□□□□□ -1.64
USP17L4A6NCW7 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.78□□□□□ -1.64
USP17L4A6NCW7 Z83818.1-201ENST00000603584 150 ntBASIC4.78□□□□□ -1.64
USP17L4A6NCW7 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.78□□□□□ -1.64
USP17L4A6NCW7 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
USP17L4A6NCW7 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
USP17L4A6NCW7 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
USP17L4A6NCW7 ADAM3A-203ENST00000461344 2157 ntBASIC4.78□□□□□ -1.64
USP17L4A6NCW7 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
USP17L4A6NCW7 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.78□□□□□ -1.64
USP17L4A6NCW7 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
USP17L4A6NCW7 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
USP17L4A6NCW7 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
USP17L4A6NCW7 AC018529.3-201ENST00000624212 2254 ntBASIC4.77□□□□□ -1.65
USP17L4A6NCW7 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
USP17L4A6NCW7 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
USP17L4A6NCW7 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
USP17L4A6NCW7 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.77□□□□□ -1.65
USP17L4A6NCW7 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
USP17L4A6NCW7 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.77□□□□□ -1.65
USP17L4A6NCW7 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.77□□□□□ -1.65
USP17L4A6NCW7 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
USP17L4A6NCW7 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.77□□□□□ -1.65
USP17L4A6NCW7 RNU6-545P-201ENST00000362681 104 ntBASIC4.77□□□□□ -1.65
USP17L4A6NCW7 Y_RNA.76-201ENST00000362931 109 ntBASIC4.77□□□□□ -1.65
USP17L4A6NCW7 Y_RNA.286-201ENST00000364813 102 ntBASIC4.77□□□□□ -1.65
USP17L4A6NCW7 PCNPP3-201ENST00000393579 471 ntBASIC4.77□□□□□ -1.65
USP17L4A6NCW7 RN7SKP177-201ENST00000410567 355 ntBASIC4.77□□□□□ -1.65
USP17L4A6NCW7 YPEL5P1-201ENST00000419731 367 ntBASIC4.77□□□□□ -1.65
USP17L4A6NCW7 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.77□□□□□ -1.65
USP17L4A6NCW7 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.77□□□□□ -1.65
USP17L4A6NCW7 AL358075.3-201ENST00000426289 226 ntBASIC4.77□□□□□ -1.65
USP17L4A6NCW7 AC078809.1-201ENST00000427601 140 ntBASIC4.77□□□□□ -1.65
USP17L4A6NCW7 RNU6-567P-201ENST00000516746 107 ntBASIC4.77□□□□□ -1.65
USP17L4A6NCW7 SCARNA14-201ENST00000516903 136 ntBASIC4.77□□□□□ -1.65
USP17L4A6NCW7 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.77□□□□□ -1.65
USP17L4A6NCW7 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.77□□□□□ -1.65
USP17L4A6NCW7 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.77□□□□□ -1.65
USP17L4A6NCW7 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
USP17L4A6NCW7 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
USP17L4A6NCW7 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
USP17L4A6NCW7 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
USP17L4A6NCW7 RNU5F-3P-201ENST00000363767 117 ntBASIC4.76□□□□□ -1.65
USP17L4A6NCW7 Y_RNA.230-201ENST00000364348 109 ntBASIC4.76□□□□□ -1.65
USP17L4A6NCW7 RNU6-746P-201ENST00000384112 109 ntBASIC4.76□□□□□ -1.65
USP17L4A6NCW7 RNU6-662P-201ENST00000384253 104 ntBASIC4.76□□□□□ -1.65
USP17L4A6NCW7 HLFP1-201ENST00000402375 499 ntBASIC4.76□□□□□ -1.65
USP17L4A6NCW7 AL672296.1-201ENST00000427780 2158 ntBASIC4.76□□□□□ -1.65
USP17L4A6NCW7 HMGN2P10-201ENST00000448085 265 ntBASIC4.76□□□□□ -1.65
USP17L4A6NCW7 AL359198.2-201ENST00000611836 194 ntBASIC4.76□□□□□ -1.65
USP17L4A6NCW7 AC004825.2-201ENST00000616634 455 ntBASIC4.76□□□□□ -1.65
USP17L4A6NCW7 AC073308.1-201ENST00000623696 305 ntBASIC4.76□□□□□ -1.65
USP17L4A6NCW7 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
USP17L4A6NCW7 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.76□□□□□ -1.65
USP17L4A6NCW7 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.76□□□□□ -1.65
USP17L4A6NCW7 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
USP17L4A6NCW7 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.76□□□□□ -1.65
USP17L4A6NCW7 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.76□□□□□ -1.65
USP17L4A6NCW7 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
USP17L4A6NCW7 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
USP17L4A6NCW7 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.75□□□□□ -1.65
USP17L4A6NCW7 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
USP17L4A6NCW7 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
USP17L4A6NCW7 Y_RNA.570-201ENST00000384750 101 ntBASIC4.75□□□□□ -1.65
USP17L4A6NCW7 MIR329-1-201ENST00000385028 80 ntBASIC4.75□□□□□ -1.65
USP17L4A6NCW7 U3.19-201ENST00000390893 196 ntBASIC4.75□□□□□ -1.65
USP17L4A6NCW7 AL591419.1-201ENST00000427423 339 ntBASIC4.75□□□□□ -1.65
USP17L4A6NCW7 HMGN2P31-201ENST00000432430 273 ntBASIC4.75□□□□□ -1.65
USP17L4A6NCW7 AC244670.1-201ENST00000436879 112 ntBASIC4.75□□□□□ -1.65
USP17L4A6NCW7 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.75□□□□□ -1.65
USP17L4A6NCW7 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.75□□□□□ -1.65
USP17L4A6NCW7 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.75□□□□□ -1.65
USP17L4A6NCW7 AL133162.1-201ENST00000463228 453 ntBASIC4.75□□□□□ -1.65
USP17L4A6NCW7 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.75□□□□□ -1.65
USP17L4A6NCW7 RN7SL271P-201ENST00000487601 295 ntBASIC4.75□□□□□ -1.65
USP17L4A6NCW7 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.75□□□□□ -1.65
USP17L4A6NCW7 RNU5F-8P-201ENST00000515941 111 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms