Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 AL079305.1-201ENST00000623159 3008 ntBASIC4.79□□□□□ -1.64
USP17L3A6NCW0 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP17L3A6NCW0 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.79□□□□□ -1.64
USP17L3A6NCW0 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
USP17L3A6NCW0 HAUS6P2-201ENST00000433254 2404 ntBASIC4.78□□□□□ -1.64
USP17L3A6NCW0 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
USP17L3A6NCW0 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.78□□□□□ -1.64
USP17L3A6NCW0 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
USP17L3A6NCW0 AC007656.2-201ENST00000624902 4547 ntBASIC4.78□□□□□ -1.64
USP17L3A6NCW0 SNORD115-8-201ENST00000363856 82 ntBASIC4.78□□□□□ -1.64
USP17L3A6NCW0 SNORD115-38-201ENST00000365037 82 ntBASIC4.78□□□□□ -1.64
USP17L3A6NCW0 U1.1-201ENST00000384101 164 ntBASIC4.78□□□□□ -1.64
USP17L3A6NCW0 RNU6-281P-201ENST00000384212 103 ntBASIC4.78□□□□□ -1.64
USP17L3A6NCW0 Y_RNA.464-201ENST00000384282 110 ntBASIC4.78□□□□□ -1.64
USP17L3A6NCW0 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.78□□□□□ -1.64
USP17L3A6NCW0 COX6CP14-201ENST00000469580 174 ntBASIC4.78□□□□□ -1.64
USP17L3A6NCW0 RPL26P26-201ENST00000480251 434 ntBASIC4.78□□□□□ -1.64
USP17L3A6NCW0 RNU6-58P-201ENST00000517143 103 ntBASIC4.78□□□□□ -1.64
USP17L3A6NCW0 SNORA31.23-201ENST00000517219 133 ntBASIC4.78□□□□□ -1.64
USP17L3A6NCW0 AC024405.2-202ENST00000532731 184 ntBASIC4.78□□□□□ -1.64
USP17L3A6NCW0 UBL5P4-201ENST00000562584 236 ntBASIC4.78□□□□□ -1.64
USP17L3A6NCW0 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.78□□□□□ -1.64
USP17L3A6NCW0 Z83818.1-201ENST00000603584 150 ntBASIC4.78□□□□□ -1.64
USP17L3A6NCW0 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.78□□□□□ -1.64
USP17L3A6NCW0 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
USP17L3A6NCW0 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
USP17L3A6NCW0 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
USP17L3A6NCW0 ADAM3A-203ENST00000461344 2157 ntBASIC4.78□□□□□ -1.64
USP17L3A6NCW0 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
USP17L3A6NCW0 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
USP17L3A6NCW0 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
USP17L3A6NCW0 AC018529.3-201ENST00000624212 2254 ntBASIC4.77□□□□□ -1.65
USP17L3A6NCW0 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
USP17L3A6NCW0 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
USP17L3A6NCW0 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
USP17L3A6NCW0 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.77□□□□□ -1.65
USP17L3A6NCW0 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.77□□□□□ -1.65
USP17L3A6NCW0 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
USP17L3A6NCW0 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.77□□□□□ -1.65
USP17L3A6NCW0 RNU6-545P-201ENST00000362681 104 ntBASIC4.77□□□□□ -1.65
USP17L3A6NCW0 Y_RNA.76-201ENST00000362931 109 ntBASIC4.77□□□□□ -1.65
USP17L3A6NCW0 Y_RNA.286-201ENST00000364813 102 ntBASIC4.77□□□□□ -1.65
USP17L3A6NCW0 PCNPP3-201ENST00000393579 471 ntBASIC4.77□□□□□ -1.65
USP17L3A6NCW0 RN7SKP177-201ENST00000410567 355 ntBASIC4.77□□□□□ -1.65
USP17L3A6NCW0 YPEL5P1-201ENST00000419731 367 ntBASIC4.77□□□□□ -1.65
USP17L3A6NCW0 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.77□□□□□ -1.65
USP17L3A6NCW0 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.77□□□□□ -1.65
USP17L3A6NCW0 AL358075.3-201ENST00000426289 226 ntBASIC4.77□□□□□ -1.65
USP17L3A6NCW0 AC078809.1-201ENST00000427601 140 ntBASIC4.77□□□□□ -1.65
USP17L3A6NCW0 RNU6-567P-201ENST00000516746 107 ntBASIC4.77□□□□□ -1.65
USP17L3A6NCW0 SCARNA14-201ENST00000516903 136 ntBASIC4.77□□□□□ -1.65
USP17L3A6NCW0 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.77□□□□□ -1.65
USP17L3A6NCW0 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.77□□□□□ -1.65
USP17L3A6NCW0 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.77□□□□□ -1.65
USP17L3A6NCW0 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
USP17L3A6NCW0 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
USP17L3A6NCW0 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
USP17L3A6NCW0 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
USP17L3A6NCW0 RNU5F-3P-201ENST00000363767 117 ntBASIC4.76□□□□□ -1.65
USP17L3A6NCW0 Y_RNA.230-201ENST00000364348 109 ntBASIC4.76□□□□□ -1.65
USP17L3A6NCW0 RNU6-746P-201ENST00000384112 109 ntBASIC4.76□□□□□ -1.65
USP17L3A6NCW0 RNU6-662P-201ENST00000384253 104 ntBASIC4.76□□□□□ -1.65
USP17L3A6NCW0 HLFP1-201ENST00000402375 499 ntBASIC4.76□□□□□ -1.65
USP17L3A6NCW0 AL672296.1-201ENST00000427780 2158 ntBASIC4.76□□□□□ -1.65
USP17L3A6NCW0 HMGN2P10-201ENST00000448085 265 ntBASIC4.76□□□□□ -1.65
USP17L3A6NCW0 AL359198.2-201ENST00000611836 194 ntBASIC4.76□□□□□ -1.65
USP17L3A6NCW0 AC004825.2-201ENST00000616634 455 ntBASIC4.76□□□□□ -1.65
USP17L3A6NCW0 AC073308.1-201ENST00000623696 305 ntBASIC4.76□□□□□ -1.65
USP17L3A6NCW0 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.76□□□□□ -1.65
USP17L3A6NCW0 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
USP17L3A6NCW0 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.76□□□□□ -1.65
USP17L3A6NCW0 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.76□□□□□ -1.65
USP17L3A6NCW0 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
USP17L3A6NCW0 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.76□□□□□ -1.65
USP17L3A6NCW0 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.76□□□□□ -1.65
USP17L3A6NCW0 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
USP17L3A6NCW0 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
USP17L3A6NCW0 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.75□□□□□ -1.65
USP17L3A6NCW0 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
USP17L3A6NCW0 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
USP17L3A6NCW0 Y_RNA.570-201ENST00000384750 101 ntBASIC4.75□□□□□ -1.65
USP17L3A6NCW0 MIR329-1-201ENST00000385028 80 ntBASIC4.75□□□□□ -1.65
USP17L3A6NCW0 U3.19-201ENST00000390893 196 ntBASIC4.75□□□□□ -1.65
USP17L3A6NCW0 AL591419.1-201ENST00000427423 339 ntBASIC4.75□□□□□ -1.65
USP17L3A6NCW0 HMGN2P31-201ENST00000432430 273 ntBASIC4.75□□□□□ -1.65
USP17L3A6NCW0 AC244670.1-201ENST00000436879 112 ntBASIC4.75□□□□□ -1.65
USP17L3A6NCW0 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.75□□□□□ -1.65
USP17L3A6NCW0 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.75□□□□□ -1.65
USP17L3A6NCW0 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.75□□□□□ -1.65
USP17L3A6NCW0 AL133162.1-201ENST00000463228 453 ntBASIC4.75□□□□□ -1.65
USP17L3A6NCW0 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.75□□□□□ -1.65
USP17L3A6NCW0 RN7SL271P-201ENST00000487601 295 ntBASIC4.75□□□□□ -1.65
USP17L3A6NCW0 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.75□□□□□ -1.65
USP17L3A6NCW0 RNU5F-8P-201ENST00000515941 111 ntBASIC4.75□□□□□ -1.65
USP17L3A6NCW0 RNU6-928P-201ENST00000516876 104 ntBASIC4.75□□□□□ -1.65
USP17L3A6NCW0 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.75□□□□□ -1.65
USP17L3A6NCW0 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.75□□□□□ -1.65
USP17L3A6NCW0 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.75□□□□□ -1.65
USP17L3A6NCW0 AL110115.1-201ENST00000614396 364 ntBASIC4.75□□□□□ -1.65
USP17L3A6NCW0 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 566.3 ms