Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 RNU4-9P-201ENST00000364951 139 ntBASIC0.11□□□□□ -2.39
CNOT1A5YKK6 EIF1P1-201ENST00000421436 341 ntBASIC0.11□□□□□ -2.39
CNOT1A5YKK6 AC139712.2-201ENST00000424302 339 ntBASIC0.11□□□□□ -2.39
CNOT1A5YKK6 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.11□□□□□ -2.39
CNOT1A5YKK6 HMGN1P13-201ENST00000505795 138 ntBASIC0.11□□□□□ -2.39
CNOT1A5YKK6 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.11□□□□□ -2.39
CNOT1A5YKK6 AC090079.2-201ENST00000575289 768 ntBASIC0.11□□□□□ -2.39
CNOT1A5YKK6 AC112220.3-201ENST00000605502 502 ntBASIC0.11□□□□□ -2.39
CNOT1A5YKK6 MIR6134-201ENST00000617606 109 ntBASIC0.11□□□□□ -2.39
CNOT1A5YKK6 AC024581.2-201ENST00000619986 252 ntBASIC0.11□□□□□ -2.39
CNOT1A5YKK6 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
CNOT1A5YKK6 RNU6-741P-201ENST00000383889 107 ntBASIC0.1□□□□□ -2.39
CNOT1A5YKK6 AC114482.1-201ENST00000418010 247 ntBASIC0.1□□□□□ -2.39
CNOT1A5YKK6 RPL21P111-201ENST00000418453 477 ntBASIC0.1□□□□□ -2.39
CNOT1A5YKK6 AL049830.1-201ENST00000468034 425 ntBASIC0.1□□□□□ -2.39
CNOT1A5YKK6 BET1P1-201ENST00000482276 359 ntBASIC0.1□□□□□ -2.39
CNOT1A5YKK6 LARP1BP2-201ENST00000486594 519 ntBASIC0.1□□□□□ -2.39
CNOT1A5YKK6 RN7SKP88-201ENST00000516847 250 ntBASIC0.1□□□□□ -2.39
CNOT1A5YKK6 AC022616.2-201ENST00000523185 300 ntBASIC0.1□□□□□ -2.39
CNOT1A5YKK6 AC023158.1-201ENST00000561632 1025 ntBASIC0.1□□□□□ -2.39
CNOT1A5YKK6 BNIP3P27-201ENST00000599991 412 ntBASIC0.1□□□□□ -2.39
CNOT1A5YKK6 AL022067.1-201ENST00000602426 454 ntBASIC0.1□□□□□ -2.39
CNOT1A5YKK6 SNRPGP20-201ENST00000604477 205 ntBASIC0.1□□□□□ -2.39
CNOT1A5YKK6 7SK.8-201ENST00000612110 250 ntBASIC0.1□□□□□ -2.39
CNOT1A5YKK6 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.1□□□□□ -2.39
CNOT1A5YKK6 7SK.11-201ENST00000615477 250 ntBASIC0.1□□□□□ -2.39
CNOT1A5YKK6 7SK.13-201ENST00000622040 250 ntBASIC0.1□□□□□ -2.39
CNOT1A5YKK6 NDUFS5P4-201ENST00000412983 318 ntBASIC0.1□□□□□ -2.39
CNOT1A5YKK6 RPL26P27-201ENST00000414397 437 ntBASIC0.1□□□□□ -2.39
CNOT1A5YKK6 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.1□□□□□ -2.39
CNOT1A5YKK6 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.1□□□□□ -2.39
CNOT1A5YKK6 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.1□□□□□ -2.39
CNOT1A5YKK6 NANOGP2-201ENST00000435391 727 ntBASIC0.1□□□□□ -2.39
CNOT1A5YKK6 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC0.1□□□□□ -2.39
CNOT1A5YKK6 FCF1P6-201ENST00000456841 595 ntBASIC0.1□□□□□ -2.39
CNOT1A5YKK6 RNA5SP269-201ENST00000459032 137 ntBASIC0.1□□□□□ -2.39
CNOT1A5YKK6 RPL22P13-201ENST00000493291 347 ntBASIC0.1□□□□□ -2.39
CNOT1A5YKK6 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.1□□□□□ -2.39
CNOT1A5YKK6 AC025465.3-201ENST00000510570 311 ntBASIC0.1□□□□□ -2.39
CNOT1A5YKK6 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.1□□□□□ -2.39
CNOT1A5YKK6 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.1□□□□□ -2.39
CNOT1A5YKK6 VBP1-203ENST00000535916 944 ntTSL 2 BASIC0.1□□□□□ -2.39
CNOT1A5YKK6 AC009509.4-201ENST00000619202 509 ntBASIC0.1□□□□□ -2.39
CNOT1A5YKK6 Y_RNA.468-201ENST00000384298 102 ntBASIC0.09□□□□□ -2.39
CNOT1A5YKK6 MIR200A-201ENST00000384875 90 ntBASIC0.09□□□□□ -2.39
CNOT1A5YKK6 MIR514A1-201ENST00000385133 98 ntBASIC0.09□□□□□ -2.39
CNOT1A5YKK6 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC0.09□□□□□ -2.39
CNOT1A5YKK6 PNRC2P1-201ENST00000423940 420 ntBASIC0.09□□□□□ -2.39
CNOT1A5YKK6 RNA5SP255-201ENST00000516370 107 ntBASIC0.09□□□□□ -2.39
CNOT1A5YKK6 SNORA76.2-201ENST00000517095 137 ntBASIC0.09□□□□□ -2.39
CNOT1A5YKK6 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC0.09□□□□□ -2.39
CNOT1A5YKK6 AC002400.1-201ENST00000569310 726 ntBASIC0.09□□□□□ -2.39
CNOT1A5YKK6 MIR4764-201ENST00000580680 88 ntBASIC0.09□□□□□ -2.39
CNOT1A5YKK6 AL031176.1-201ENST00000604554 466 ntBASIC0.09□□□□□ -2.39
CNOT1A5YKK6 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.09□□□□□ -2.39
CNOT1A5YKK6 AC106858.1-201ENST00000637497 429 ntBASIC0.09□□□□□ -2.39
CNOT1A5YKK6 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.39
CNOT1A5YKK6 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.4
CNOT1A5YKK6 RNU6-302P-201ENST00000365249 107 ntBASIC0.09□□□□□ -2.4
CNOT1A5YKK6 SNORA32.3-201ENST00000384772 121 ntBASIC0.09□□□□□ -2.4
CNOT1A5YKK6 MTND4LP11-201ENST00000422184 280 ntBASIC0.09□□□□□ -2.4
CNOT1A5YKK6 AL589872.1-201ENST00000426602 288 ntBASIC0.09□□□□□ -2.4
CNOT1A5YKK6 MTCYBP32-201ENST00000427945 1084 ntBASIC0.09□□□□□ -2.4
CNOT1A5YKK6 AL592447.1-201ENST00000447592 540 ntBASIC0.09□□□□□ -2.4
CNOT1A5YKK6 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.09□□□□□ -2.4
CNOT1A5YKK6 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.09□□□□□ -2.4
CNOT1A5YKK6 RNU6-488P-201ENST00000515918 99 ntBASIC0.09□□□□□ -2.4
CNOT1A5YKK6 SNORA25.11-201ENST00000515935 105 ntBASIC0.09□□□□□ -2.4
CNOT1A5YKK6 RNU6-782P-201ENST00000516852 104 ntBASIC0.09□□□□□ -2.4
CNOT1A5YKK6 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.09□□□□□ -2.4
CNOT1A5YKK6 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.09□□□□□ -2.4
CNOT1A5YKK6 AC069114.2-201ENST00000604699 304 ntBASIC0.09□□□□□ -2.4
CNOT1A5YKK6 AC104465.1-201ENST00000611365 139 ntBASIC0.09□□□□□ -2.4
CNOT1A5YKK6 AC073349.3-201ENST00000617616 186 ntBASIC0.09□□□□□ -2.4
CNOT1A5YKK6 SNORD44.1-201ENST00000363202 61 ntBASIC0.08□□□□□ -2.4
CNOT1A5YKK6 Y_RNA.568-201ENST00000384742 113 ntBASIC0.08□□□□□ -2.4
CNOT1A5YKK6 MIR1262-201ENST00000408276 93 ntBASIC0.08□□□□□ -2.4
CNOT1A5YKK6 AC092423.1-201ENST00000430165 186 ntBASIC0.08□□□□□ -2.4
CNOT1A5YKK6 C1DP5-201ENST00000525775 383 ntBASIC0.08□□□□□ -2.4
CNOT1A5YKK6 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.08□□□□□ -2.4
CNOT1A5YKK6 AP003066.2-201ENST00000529375 555 ntBASIC0.08□□□□□ -2.4
CNOT1A5YKK6 SNORA77B-201ENST00000578179 125 ntBASIC0.08□□□□□ -2.4
CNOT1A5YKK6 Y_RNA.551-201ENST00000384661 102 ntBASIC0.08□□□□□ -2.4
CNOT1A5YKK6 RNU6-575P-201ENST00000411326 105 ntBASIC0.08□□□□□ -2.4
CNOT1A5YKK6 AC127391.1-201ENST00000411737 98 ntBASIC0.08□□□□□ -2.4
CNOT1A5YKK6 ZNF92P1Y-201ENST00000415010 1191 ntBASIC0.08□□□□□ -2.4
CNOT1A5YKK6 AC010631.1-201ENST00000474150 156 ntBASIC0.08□□□□□ -2.4
CNOT1A5YKK6 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.08□□□□□ -2.4
CNOT1A5YKK6 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.08□□□□□ -2.4
CNOT1A5YKK6 RNU6-165P-201ENST00000517170 99 ntBASIC0.08□□□□□ -2.4
CNOT1A5YKK6 AP003049.1-201ENST00000529418 457 ntBASIC0.08□□□□□ -2.4
CNOT1A5YKK6 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.08□□□□□ -2.4
CNOT1A5YKK6 AC093027.1-201ENST00000546698 429 ntBASIC0.08□□□□□ -2.4
CNOT1A5YKK6 LARP7P1-201ENST00000605576 316 ntBASIC0.08□□□□□ -2.4
CNOT1A5YKK6 AC011939.3-201ENST00000613686 466 ntBASIC0.08□□□□□ -2.4
CNOT1A5YKK6 AL109659.3-201ENST00000624985 950 ntBASIC0.08□□□□□ -2.4
CNOT1A5YKK6 SNORD114-16-201ENST00000363044 70 ntBASIC0.07□□□□□ -2.4
CNOT1A5YKK6 RNU6-945P-201ENST00000383947 107 ntBASIC0.07□□□□□ -2.4
CNOT1A5YKK6 RNU6-444P-201ENST00000383988 108 ntBASIC0.07□□□□□ -2.4
CNOT1A5YKK6 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms