Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 AP004217.1-201ENST00000480579 346 ntBASIC3.11□□□□□ -1.91
TCRBV5S1A1TA0A578 RPL17P19-201ENST00000489069 552 ntBASIC3.11□□□□□ -1.91
TCRBV5S1A1TA0A578 AC114801.2-201ENST00000503825 781 ntBASIC3.11□□□□□ -1.91
TCRBV5S1A1TA0A578 RNU1-103P-201ENST00000516502 125 ntBASIC3.11□□□□□ -1.91
TCRBV5S1A1TA0A578 Y_RNA.687-201ENST00000516558 91 ntBASIC3.11□□□□□ -1.91
TCRBV5S1A1TA0A578 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TCRBV5S1A1TA0A578 AC103996.1-201ENST00000555468 102 ntBASIC3.11□□□□□ -1.91
TCRBV5S1A1TA0A578 LINC00933-203ENST00000559812 219 ntBASIC3.11□□□□□ -1.91
TCRBV5S1A1TA0A578 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.11□□□□□ -1.91
TCRBV5S1A1TA0A578 AC107294.3-201ENST00000609211 526 ntBASIC3.11□□□□□ -1.91
TCRBV5S1A1TA0A578 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.11□□□□□ -1.91
TCRBV5S1A1TA0A578 AC048347.1-201ENST00000624621 427 ntBASIC3.11□□□□□ -1.91
TCRBV5S1A1TA0A578 SCARNA4-202ENST00000625402 129 ntBASIC3.11□□□□□ -1.91
TCRBV5S1A1TA0A578 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
TCRBV5S1A1TA0A578 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
TCRBV5S1A1TA0A578 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.11□□□□□ -1.91
TCRBV5S1A1TA0A578 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
TCRBV5S1A1TA0A578 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TCRBV5S1A1TA0A578 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TCRBV5S1A1TA0A578 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
TCRBV5S1A1TA0A578 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TCRBV5S1A1TA0A578 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
TCRBV5S1A1TA0A578 MIR208A-201ENST00000362287 71 ntBASIC3.1□□□□□ -1.91
TCRBV5S1A1TA0A578 MIR521-1-201ENST00000384902 87 ntBASIC3.1□□□□□ -1.91
TCRBV5S1A1TA0A578 AL356057.3-201ENST00000402607 340 ntBASIC3.1□□□□□ -1.91
TCRBV5S1A1TA0A578 AL591034.2-201ENST00000402839 359 ntBASIC3.1□□□□□ -1.91
TCRBV5S1A1TA0A578 HSPE1P26-201ENST00000405341 275 ntBASIC3.1□□□□□ -1.91
TCRBV5S1A1TA0A578 HMGN2P30-201ENST00000423237 256 ntBASIC3.1□□□□□ -1.91
TCRBV5S1A1TA0A578 MTCYBP10-201ENST00000424905 650 ntBASIC3.1□□□□□ -1.91
TCRBV5S1A1TA0A578 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.1□□□□□ -1.91
TCRBV5S1A1TA0A578 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.1□□□□□ -1.91
TCRBV5S1A1TA0A578 BTF3P15-201ENST00000455606 336 ntBASIC3.1□□□□□ -1.91
TCRBV5S1A1TA0A578 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.1□□□□□ -1.91
TCRBV5S1A1TA0A578 RPL9P32-201ENST00000464118 620 ntBASIC3.1□□□□□ -1.91
TCRBV5S1A1TA0A578 AC034236.1-201ENST00000469891 373 ntBASIC3.1□□□□□ -1.91
TCRBV5S1A1TA0A578 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.1□□□□□ -1.91
TCRBV5S1A1TA0A578 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.1□□□□□ -1.91
TCRBV5S1A1TA0A578 AC022447.4-201ENST00000504053 364 ntBASIC3.1□□□□□ -1.91
TCRBV5S1A1TA0A578 AC021146.2-201ENST00000504736 556 ntBASIC3.1□□□□□ -1.91
TCRBV5S1A1TA0A578 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.1□□□□□ -1.91
TCRBV5S1A1TA0A578 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.1□□□□□ -1.91
TCRBV5S1A1TA0A578 RNU6-1046P-201ENST00000516538 107 ntBASIC3.1□□□□□ -1.91
TCRBV5S1A1TA0A578 RNU6-1183P-201ENST00000517054 60 ntBASIC3.1□□□□□ -1.91
TCRBV5S1A1TA0A578 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TCRBV5S1A1TA0A578 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.1□□□□□ -1.91
TCRBV5S1A1TA0A578 CYCSP39-201ENST00000565821 309 ntBASIC3.1□□□□□ -1.91
TCRBV5S1A1TA0A578 AC092447.9-201ENST00000603395 144 ntBASIC3.1□□□□□ -1.91
TCRBV5S1A1TA0A578 AL713922.2-201ENST00000619384 716 ntBASIC3.1□□□□□ -1.91
TCRBV5S1A1TA0A578 AC138627.2-201ENST00000624202 601 ntBASIC3.1□□□□□ -1.91
TCRBV5S1A1TA0A578 U2.21-201ENST00000637295 81 ntBASIC3.1□□□□□ -1.91
TCRBV5S1A1TA0A578 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.1□□□□□ -1.91
TCRBV5S1A1TA0A578 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.1□□□□□ -1.91
TCRBV5S1A1TA0A578 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.1□□□□□ -1.91
TCRBV5S1A1TA0A578 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
TCRBV5S1A1TA0A578 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TCRBV5S1A1TA0A578 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.09□□□□□ -1.91
TCRBV5S1A1TA0A578 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.09□□□□□ -1.91
TCRBV5S1A1TA0A578 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TCRBV5S1A1TA0A578 CUL1P1-201ENST00000509510 2425 ntBASIC3.09□□□□□ -1.91
TCRBV5S1A1TA0A578 Y_RNA.80-201ENST00000362996 102 ntBASIC3.09□□□□□ -1.91
TCRBV5S1A1TA0A578 RNU6-778P-201ENST00000363269 103 ntBASIC3.09□□□□□ -1.91
TCRBV5S1A1TA0A578 Y_RNA.144-201ENST00000363521 113 ntBASIC3.09□□□□□ -1.91
TCRBV5S1A1TA0A578 SNORA38.1-201ENST00000364172 131 ntBASIC3.09□□□□□ -1.91
TCRBV5S1A1TA0A578 RNU6-72P-201ENST00000384285 79 ntBASIC3.09□□□□□ -1.91
TCRBV5S1A1TA0A578 RNU6-1105P-201ENST00000384774 107 ntBASIC3.09□□□□□ -1.91
TCRBV5S1A1TA0A578 SNORA48.5-201ENST00000391143 135 ntBASIC3.09□□□□□ -1.91
TCRBV5S1A1TA0A578 U3.37-201ENST00000408528 213 ntBASIC3.09□□□□□ -1.91
TCRBV5S1A1TA0A578 RNU2-37P-201ENST00000410695 177 ntBASIC3.09□□□□□ -1.91
TCRBV5S1A1TA0A578 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.09□□□□□ -1.91
TCRBV5S1A1TA0A578 RPL26P27-201ENST00000414397 437 ntBASIC3.09□□□□□ -1.91
TCRBV5S1A1TA0A578 AL358176.2-201ENST00000425769 204 ntBASIC3.09□□□□□ -1.91
TCRBV5S1A1TA0A578 HMGN2P16-201ENST00000456802 261 ntBASIC3.09□□□□□ -1.91
TCRBV5S1A1TA0A578 AC006026.2-201ENST00000457376 180 ntBASIC3.09□□□□□ -1.91
TCRBV5S1A1TA0A578 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.09□□□□□ -1.91
TCRBV5S1A1TA0A578 HMGN2P13-201ENST00000476476 274 ntBASIC3.09□□□□□ -1.91
TCRBV5S1A1TA0A578 AC116655.1-201ENST00000508324 901 ntBASIC3.09□□□□□ -1.91
TCRBV5S1A1TA0A578 RNU6-764P-201ENST00000516396 105 ntBASIC3.09□□□□□ -1.91
TCRBV5S1A1TA0A578 AP005902.1-201ENST00000521358 186 ntBASIC3.09□□□□□ -1.91
TCRBV5S1A1TA0A578 GNAI2P1-201ENST00000541815 315 ntBASIC3.09□□□□□ -1.91
TCRBV5S1A1TA0A578 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.09□□□□□ -1.91
TCRBV5S1A1TA0A578 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.09□□□□□ -1.91
TCRBV5S1A1TA0A578 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.09□□□□□ -1.91
TCRBV5S1A1TA0A578 MIR8076-201ENST00000611401 83 ntBASIC3.09□□□□□ -1.91
TCRBV5S1A1TA0A578 AC096577.2-201ENST00000611455 153 ntBASIC3.09□□□□□ -1.91
TCRBV5S1A1TA0A578 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.09□□□□□ -1.91
TCRBV5S1A1TA0A578 AL162373.1-201ENST00000620433 407 ntBASIC3.09□□□□□ -1.91
TCRBV5S1A1TA0A578 U4.7-201ENST00000638126 106 ntBASIC3.09□□□□□ -1.91
TCRBV5S1A1TA0A578 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.09□□□□□ -1.91
TCRBV5S1A1TA0A578 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
TCRBV5S1A1TA0A578 AC008264.2-201ENST00000610193 3731 ntBASIC3.09□□□□□ -1.92
TCRBV5S1A1TA0A578 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.09□□□□□ -1.92
TCRBV5S1A1TA0A578 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
TCRBV5S1A1TA0A578 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TCRBV5S1A1TA0A578 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.08□□□□□ -1.92
TCRBV5S1A1TA0A578 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
TCRBV5S1A1TA0A578 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
TCRBV5S1A1TA0A578 MTND5P27-201ENST00000428871 1720 ntBASIC3.08□□□□□ -1.92
TCRBV5S1A1TA0A578 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.08□□□□□ -1.92
TCRBV5S1A1TA0A578 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TCRBV5S1A1TA0A578 Y_RNA.48-201ENST00000362710 103 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms