Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 MIR8070-201ENST00000616510 88 ntBASIC0.81□□□□□ -2.28
TRAV3A0A0B4J244 AC123767.1-202ENST00000620407 817 ntBASIC0.81□□□□□ -2.28
TRAV3A0A0B4J244 MIR1248-201ENST00000629190 106 ntBASIC0.81□□□□□ -2.28
TRAV3A0A0B4J244 AL512643.1-201ENST00000635735 524 ntBASIC0.81□□□□□ -2.28
TRAV3A0A0B4J244 AC099654.8-201ENST00000637757 681 ntBASIC0.81□□□□□ -2.28
TRAV3A0A0B4J244 Y_RNA.33-201ENST00000362591 102 ntBASIC0.8□□□□□ -2.28
TRAV3A0A0B4J244 RNU6-395P-201ENST00000365662 106 ntBASIC0.8□□□□□ -2.28
TRAV3A0A0B4J244 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.8□□□□□ -2.28
TRAV3A0A0B4J244 RNU6-224P-201ENST00000384055 107 ntBASIC0.8□□□□□ -2.28
TRAV3A0A0B4J244 SNORA70.7-201ENST00000384159 133 ntBASIC0.8□□□□□ -2.28
TRAV3A0A0B4J244 RNU6-72P-201ENST00000384285 79 ntBASIC0.8□□□□□ -2.28
TRAV3A0A0B4J244 Y_RNA.578-201ENST00000390903 88 ntBASIC0.8□□□□□ -2.28
TRAV3A0A0B4J244 MIR1287-201ENST00000408492 90 ntBASIC0.8□□□□□ -2.28
TRAV3A0A0B4J244 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC0.8□□□□□ -2.28
TRAV3A0A0B4J244 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.8□□□□□ -2.28
TRAV3A0A0B4J244 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.8□□□□□ -2.28
TRAV3A0A0B4J244 C8orf59P1-201ENST00000429930 303 ntBASIC0.8□□□□□ -2.28
TRAV3A0A0B4J244 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.8□□□□□ -2.28
TRAV3A0A0B4J244 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.8□□□□□ -2.28
TRAV3A0A0B4J244 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV3A0A0B4J244 AL353752.1-201ENST00000454946 260 ntBASIC0.8□□□□□ -2.28
TRAV3A0A0B4J244 AC108059.3-201ENST00000456388 214 ntBASIC0.8□□□□□ -2.28
TRAV3A0A0B4J244 RNU1-131P-201ENST00000458943 161 ntBASIC0.8□□□□□ -2.28
TRAV3A0A0B4J244 AC087343.1-201ENST00000477341 475 ntBASIC0.8□□□□□ -2.28
TRAV3A0A0B4J244 MTND1P3-201ENST00000484956 952 ntBASIC0.8□□□□□ -2.28
TRAV3A0A0B4J244 RPS23P4-201ENST00000487908 423 ntBASIC0.8□□□□□ -2.28
TRAV3A0A0B4J244 HMGB1P30-201ENST00000492455 606 ntBASIC0.8□□□□□ -2.28
TRAV3A0A0B4J244 RNU6-914P-201ENST00000516749 109 ntBASIC0.8□□□□□ -2.28
TRAV3A0A0B4J244 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.8□□□□□ -2.28
TRAV3A0A0B4J244 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV3A0A0B4J244 RPL21P5-201ENST00000554662 472 ntBASIC0.8□□□□□ -2.28
TRAV3A0A0B4J244 AC002400.1-201ENST00000569310 726 ntBASIC0.8□□□□□ -2.28
TRAV3A0A0B4J244 AC022022.2-201ENST00000602989 360 ntBASIC0.8□□□□□ -2.28
TRAV3A0A0B4J244 HSPE1P19-201ENST00000603327 295 ntBASIC0.8□□□□□ -2.28
TRAV3A0A0B4J244 AL022154.1-201ENST00000604698 785 ntBASIC0.8□□□□□ -2.28
TRAV3A0A0B4J244 AC080078.3-201ENST00000605407 463 ntBASIC0.8□□□□□ -2.28
TRAV3A0A0B4J244 AC092574.1-201ENST00000609771 420 ntBASIC0.8□□□□□ -2.28
TRAV3A0A0B4J244 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.8□□□□□ -2.28
TRAV3A0A0B4J244 AL121890.5-201ENST00000620848 304 ntBASIC0.8□□□□□ -2.28
TRAV3A0A0B4J244 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.8□□□□□ -2.28
TRAV3A0A0B4J244 AC090517.3-201ENST00000625170 141 ntBASIC0.8□□□□□ -2.28
TRAV3A0A0B4J244 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.8□□□□□ -2.28
TRAV3A0A0B4J244 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
TRAV3A0A0B4J244 MTND5P9-201ENST00000503854 1755 ntBASIC0.79□□□□□ -2.28
TRAV3A0A0B4J244 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
TRAV3A0A0B4J244 RNU6-462P-201ENST00000362659 105 ntBASIC0.79□□□□□ -2.28
TRAV3A0A0B4J244 RNU6-23P-201ENST00000363283 107 ntBASIC0.79□□□□□ -2.28
TRAV3A0A0B4J244 RNU4-38P-201ENST00000364472 129 ntBASIC0.79□□□□□ -2.28
TRAV3A0A0B4J244 RNU6-278P-201ENST00000390945 109 ntBASIC0.79□□□□□ -2.28
TRAV3A0A0B4J244 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.79□□□□□ -2.28
TRAV3A0A0B4J244 SNRPEP10-201ENST00000420249 274 ntBASIC0.79□□□□□ -2.28
TRAV3A0A0B4J244 AL365338.1-201ENST00000422282 858 ntBASIC0.79□□□□□ -2.28
TRAV3A0A0B4J244 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.79□□□□□ -2.28
TRAV3A0A0B4J244 RPS15AP10-201ENST00000432472 382 ntBASIC0.79□□□□□ -2.28
TRAV3A0A0B4J244 MTND4P25-201ENST00000441039 533 ntBASIC0.79□□□□□ -2.28
TRAV3A0A0B4J244 JTBP1-201ENST00000441314 247 ntBASIC0.79□□□□□ -2.28
TRAV3A0A0B4J244 AC021146.8-201ENST00000507455 733 ntBASIC0.79□□□□□ -2.28
TRAV3A0A0B4J244 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.79□□□□□ -2.28
TRAV3A0A0B4J244 AC079395.1-201ENST00000510981 262 ntBASIC0.79□□□□□ -2.28
TRAV3A0A0B4J244 SNORA3.4-201ENST00000515969 96 ntBASIC0.79□□□□□ -2.28
TRAV3A0A0B4J244 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.79□□□□□ -2.28
TRAV3A0A0B4J244 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.79□□□□□ -2.28
TRAV3A0A0B4J244 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.79□□□□□ -2.28
TRAV3A0A0B4J244 AP003122.4-201ENST00000530980 758 ntBASIC0.79□□□□□ -2.28
TRAV3A0A0B4J244 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
TRAV3A0A0B4J244 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.79□□□□□ -2.28
TRAV3A0A0B4J244 AC137800.2-201ENST00000574375 120 ntBASIC0.79□□□□□ -2.28
TRAV3A0A0B4J244 AC103810.9-201ENST00000606688 112 ntBASIC0.79□□□□□ -2.28
TRAV3A0A0B4J244 AC068205.3-201ENST00000636385 468 ntBASIC0.79□□□□□ -2.28
TRAV3A0A0B4J244 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.78□□□□□ -2.28
TRAV3A0A0B4J244 SNORD33-201ENST00000362761 85 ntBASIC0.78□□□□□ -2.28
TRAV3A0A0B4J244 Y_RNA.226-201ENST00000364337 114 ntBASIC0.78□□□□□ -2.28
TRAV3A0A0B4J244 SNORA25.8-201ENST00000364831 128 ntBASIC0.78□□□□□ -2.28
TRAV3A0A0B4J244 SMIM11P1-201ENST00000369586 178 ntBASIC0.78□□□□□ -2.28
TRAV3A0A0B4J244 RNU6-360P-201ENST00000390944 104 ntBASIC0.78□□□□□ -2.28
TRAV3A0A0B4J244 MIR1305-201ENST00000408300 86 ntBASIC0.78□□□□□ -2.28
TRAV3A0A0B4J244 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.78□□□□□ -2.28
TRAV3A0A0B4J244 AL161935.2-201ENST00000414627 60 ntBASIC0.78□□□□□ -2.28
TRAV3A0A0B4J244 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.78□□□□□ -2.28
TRAV3A0A0B4J244 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.78□□□□□ -2.28
TRAV3A0A0B4J244 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.78□□□□□ -2.28
TRAV3A0A0B4J244 NDUFA5P4-201ENST00000436704 385 ntBASIC0.78□□□□□ -2.28
TRAV3A0A0B4J244 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
TRAV3A0A0B4J244 RPL23AP35-201ENST00000451906 501 ntBASIC0.78□□□□□ -2.28
TRAV3A0A0B4J244 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.78□□□□□ -2.28
TRAV3A0A0B4J244 RNU6-965P-201ENST00000516721 96 ntBASIC0.78□□□□□ -2.28
TRAV3A0A0B4J244 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.78□□□□□ -2.28
TRAV3A0A0B4J244 AL356057.1-201ENST00000533798 831 ntBASIC0.78□□□□□ -2.28
TRAV3A0A0B4J244 AC025678.1-201ENST00000567861 338 ntBASIC0.78□□□□□ -2.28
TRAV3A0A0B4J244 MTCYBP33-201ENST00000575007 1130 ntBASIC0.78□□□□□ -2.28
TRAV3A0A0B4J244 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.78□□□□□ -2.28
TRAV3A0A0B4J244 AL596327.1-201ENST00000603629 213 ntBASIC0.78□□□□□ -2.28
TRAV3A0A0B4J244 AC022893.3-201ENST00000607665 437 ntBASIC0.78□□□□□ -2.28
TRAV3A0A0B4J244 AC124016.2-201ENST00000610058 665 ntBASIC0.78□□□□□ -2.28
TRAV3A0A0B4J244 AC245297.2-201ENST00000610119 565 ntBASIC0.78□□□□□ -2.28
TRAV3A0A0B4J244 AL355472.4-201ENST00000610233 626 ntBASIC0.78□□□□□ -2.28
TRAV3A0A0B4J244 MIR6504-201ENST00000613520 61 ntBASIC0.78□□□□□ -2.28
TRAV3A0A0B4J244 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.78□□□□□ -2.28
TRAV3A0A0B4J244 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
TRAV3A0A0B4J244 RNU6-858P-201ENST00000362436 107 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms