Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.54□□□□□ -2.32
HLA-DRB4X5D2U9 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.54□□□□□ -2.32
HLA-DRB4X5D2U9 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.54□□□□□ -2.32
HLA-DRB4X5D2U9 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.54□□□□□ -2.32
HLA-DRB4X5D2U9 VN1R83P-201ENST00000595685 445 ntBASIC0.54□□□□□ -2.32
HLA-DRB4X5D2U9 AC136443.5-201ENST00000603741 370 ntBASIC0.54□□□□□ -2.32
HLA-DRB4X5D2U9 AL450270.1-201ENST00000606160 391 ntBASIC0.54□□□□□ -2.32
HLA-DRB4X5D2U9 7SK.8-201ENST00000612110 250 ntBASIC0.54□□□□□ -2.32
HLA-DRB4X5D2U9 7SK.11-201ENST00000615477 250 ntBASIC0.54□□□□□ -2.32
HLA-DRB4X5D2U9 MIR8070-201ENST00000616510 88 ntBASIC0.54□□□□□ -2.32
HLA-DRB4X5D2U9 AC010975.3-201ENST00000618727 978 ntBASIC0.54□□□□□ -2.32
HLA-DRB4X5D2U9 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.54□□□□□ -2.32
HLA-DRB4X5D2U9 7SK.13-201ENST00000622040 250 ntBASIC0.54□□□□□ -2.32
HLA-DRB4X5D2U9 AC120349.2-201ENST00000625002 298 ntBASIC0.54□□□□□ -2.32
HLA-DRB4X5D2U9 AC099654.9-201ENST00000637055 678 ntBASIC0.54□□□□□ -2.32
HLA-DRB4X5D2U9 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
HLA-DRB4X5D2U9 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
HLA-DRB4X5D2U9 RNU6-707P-201ENST00000364647 95 ntBASIC0.53□□□□□ -2.32
HLA-DRB4X5D2U9 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.53□□□□□ -2.32
HLA-DRB4X5D2U9 SNX2P2-201ENST00000424553 323 ntBASIC0.53□□□□□ -2.32
HLA-DRB4X5D2U9 AC114878.1-201ENST00000441166 358 ntBASIC0.53□□□□□ -2.32
HLA-DRB4X5D2U9 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
HLA-DRB4X5D2U9 SNORA3.4-201ENST00000515969 96 ntBASIC0.53□□□□□ -2.32
HLA-DRB4X5D2U9 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.53□□□□□ -2.32
HLA-DRB4X5D2U9 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.53□□□□□ -2.32
HLA-DRB4X5D2U9 AL356057.1-201ENST00000533798 831 ntBASIC0.53□□□□□ -2.32
HLA-DRB4X5D2U9 AP001981.2-201ENST00000603241 418 ntBASIC0.53□□□□□ -2.32
HLA-DRB4X5D2U9 MIR6504-201ENST00000613520 61 ntBASIC0.53□□□□□ -2.32
HLA-DRB4X5D2U9 MIR1248-201ENST00000629190 106 ntBASIC0.53□□□□□ -2.32
HLA-DRB4X5D2U9 AC018630.2-201ENST00000534866 2403 ntBASIC0.52□□□□□ -2.33
HLA-DRB4X5D2U9 RNU6-858P-201ENST00000362436 107 ntBASIC0.52□□□□□ -2.33
HLA-DRB4X5D2U9 RNU6-1210P-201ENST00000363775 107 ntBASIC0.52□□□□□ -2.33
HLA-DRB4X5D2U9 SNORD114-6-201ENST00000364393 72 ntBASIC0.52□□□□□ -2.33
HLA-DRB4X5D2U9 MTCO1P56-201ENST00000401674 224 ntBASIC0.52□□□□□ -2.33
HLA-DRB4X5D2U9 CBX3P9-201ENST00000402326 552 ntBASIC0.52□□□□□ -2.33
HLA-DRB4X5D2U9 RPL21P24-201ENST00000413752 448 ntBASIC0.52□□□□□ -2.33
HLA-DRB4X5D2U9 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.52□□□□□ -2.33
HLA-DRB4X5D2U9 EBAG9P1-201ENST00000418955 543 ntBASIC0.52□□□□□ -2.33
HLA-DRB4X5D2U9 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.52□□□□□ -2.33
HLA-DRB4X5D2U9 TRIM60P13-201ENST00000432350 1283 ntBASIC0.52□□□□□ -2.33
HLA-DRB4X5D2U9 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.52□□□□□ -2.33
HLA-DRB4X5D2U9 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.52□□□□□ -2.33
HLA-DRB4X5D2U9 MED28P2-201ENST00000475771 317 ntBASIC0.52□□□□□ -2.33
HLA-DRB4X5D2U9 HMGN2P9-201ENST00000476875 229 ntBASIC0.52□□□□□ -2.33
HLA-DRB4X5D2U9 AC009902.1-201ENST00000519351 183 ntBASIC0.52□□□□□ -2.33
HLA-DRB4X5D2U9 AC136628.3-201ENST00000521868 290 ntBASIC0.52□□□□□ -2.33
HLA-DRB4X5D2U9 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
HLA-DRB4X5D2U9 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.52□□□□□ -2.33
HLA-DRB4X5D2U9 AC136618.2-201ENST00000575091 400 ntBASIC0.52□□□□□ -2.33
HLA-DRB4X5D2U9 FAM106DP-201ENST00000586416 501 ntBASIC0.52□□□□□ -2.33
HLA-DRB4X5D2U9 MIR6835-201ENST00000621552 64 ntBASIC0.52□□□□□ -2.33
HLA-DRB4X5D2U9 AC120349.3-201ENST00000624377 529 ntBASIC0.52□□□□□ -2.33
HLA-DRB4X5D2U9 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.52□□□□□ -2.33
HLA-DRB4X5D2U9 Y_RNA.191-201ENST00000363972 113 ntBASIC0.51□□□□□ -2.33
HLA-DRB4X5D2U9 SNORA25.9-201ENST00000365087 128 ntBASIC0.51□□□□□ -2.33
HLA-DRB4X5D2U9 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
HLA-DRB4X5D2U9 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.51□□□□□ -2.33
HLA-DRB4X5D2U9 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.51□□□□□ -2.33
HLA-DRB4X5D2U9 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
HLA-DRB4X5D2U9 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC0.51□□□□□ -2.33
HLA-DRB4X5D2U9 AL078601.1-201ENST00000444542 271 ntBASIC0.51□□□□□ -2.33
HLA-DRB4X5D2U9 FTH1P25-201ENST00000447665 469 ntBASIC0.51□□□□□ -2.33
HLA-DRB4X5D2U9 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC0.51□□□□□ -2.33
HLA-DRB4X5D2U9 MRPL42P4-201ENST00000453267 443 ntBASIC0.51□□□□□ -2.33
HLA-DRB4X5D2U9 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.51□□□□□ -2.33
HLA-DRB4X5D2U9 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.51□□□□□ -2.33
HLA-DRB4X5D2U9 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
HLA-DRB4X5D2U9 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.51□□□□□ -2.33
HLA-DRB4X5D2U9 AC117454.1-201ENST00000491120 168 ntBASIC0.51□□□□□ -2.33
HLA-DRB4X5D2U9 AC134050.1-201ENST00000495088 933 ntBASIC0.51□□□□□ -2.33
HLA-DRB4X5D2U9 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.51□□□□□ -2.33
HLA-DRB4X5D2U9 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.51□□□□□ -2.33
HLA-DRB4X5D2U9 ATP5EP1-201ENST00000510257 156 ntBASIC0.51□□□□□ -2.33
HLA-DRB4X5D2U9 RNU6-197P-201ENST00000516680 100 ntBASIC0.51□□□□□ -2.33
HLA-DRB4X5D2U9 SNORA76.2-201ENST00000517095 137 ntBASIC0.51□□□□□ -2.33
HLA-DRB4X5D2U9 AC006518.2-201ENST00000542513 940 ntBASIC0.51□□□□□ -2.33
HLA-DRB4X5D2U9 HSPE1P4-201ENST00000550617 308 ntBASIC0.51□□□□□ -2.33
HLA-DRB4X5D2U9 HMGB1P33-201ENST00000563485 527 ntBASIC0.51□□□□□ -2.33
HLA-DRB4X5D2U9 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.51□□□□□ -2.33
HLA-DRB4X5D2U9 MIR3529-201ENST00000637713 78 ntBASIC0.51□□□□□ -2.33
HLA-DRB4X5D2U9 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
HLA-DRB4X5D2U9 AC245060.5-201ENST00000610778 3293 ntBASIC0.5□□□□□ -2.33
HLA-DRB4X5D2U9 AC107982.1-201ENST00000507171 1300 ntBASIC0.5□□□□□ -2.33
HLA-DRB4X5D2U9 SNORD114-22-201ENST00000365423 72 ntBASIC0.5□□□□□ -2.33
HLA-DRB4X5D2U9 MIR520A-201ENST00000384862 85 ntBASIC0.5□□□□□ -2.33
HLA-DRB4X5D2U9 MIR548B-201ENST00000385247 97 ntBASIC0.5□□□□□ -2.33
HLA-DRB4X5D2U9 AL158050.1-201ENST00000416077 457 ntBASIC0.5□□□□□ -2.33
HLA-DRB4X5D2U9 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.5□□□□□ -2.33
HLA-DRB4X5D2U9 AC027644.1-201ENST00000419595 298 ntBASIC0.5□□□□□ -2.33
HLA-DRB4X5D2U9 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.5□□□□□ -2.33
HLA-DRB4X5D2U9 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.5□□□□□ -2.33
HLA-DRB4X5D2U9 MTND4LP7-201ENST00000431728 294 ntBASIC0.5□□□□□ -2.33
HLA-DRB4X5D2U9 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.5□□□□□ -2.33
HLA-DRB4X5D2U9 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.5□□□□□ -2.33
HLA-DRB4X5D2U9 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.5□□□□□ -2.33
HLA-DRB4X5D2U9 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.5□□□□□ -2.33
HLA-DRB4X5D2U9 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.5□□□□□ -2.33
HLA-DRB4X5D2U9 OR6C7P-201ENST00000547875 934 ntBASIC0.5□□□□□ -2.33
HLA-DRB4X5D2U9 CYP3A137P-201ENST00000562436 69 ntBASIC0.5□□□□□ -2.33
HLA-DRB4X5D2U9 AC137800.2-201ENST00000574375 120 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms