Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 PTP4A1P4-201ENST00000512479 322 ntBASIC3.47□□□□□ -1.85
PCDHGA3Q9Y5H0 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.47□□□□□ -1.85
PCDHGA3Q9Y5H0 RNA5SP208-201ENST00000516156 78 ntBASIC3.47□□□□□ -1.85
PCDHGA3Q9Y5H0 Y_RNA.670-201ENST00000516255 105 ntBASIC3.47□□□□□ -1.85
PCDHGA3Q9Y5H0 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.47□□□□□ -1.85
PCDHGA3Q9Y5H0 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.47□□□□□ -1.85
PCDHGA3Q9Y5H0 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.47□□□□□ -1.85
PCDHGA3Q9Y5H0 AC010653.1-201ENST00000571108 881 ntBASIC3.47□□□□□ -1.85
PCDHGA3Q9Y5H0 AL391813.1-201ENST00000603098 260 ntBASIC3.47□□□□□ -1.85
PCDHGA3Q9Y5H0 AL355877.2-201ENST00000603670 358 ntBASIC3.47□□□□□ -1.85
PCDHGA3Q9Y5H0 AC080078.3-201ENST00000605407 463 ntBASIC3.47□□□□□ -1.85
PCDHGA3Q9Y5H0 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
PCDHGA3Q9Y5H0 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.47□□□□□ -1.85
PCDHGA3Q9Y5H0 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PCDHGA3Q9Y5H0 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
PCDHGA3Q9Y5H0 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.46□□□□□ -1.85
PCDHGA3Q9Y5H0 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
PCDHGA3Q9Y5H0 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.46□□□□□ -1.86
PCDHGA3Q9Y5H0 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PCDHGA3Q9Y5H0 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
PCDHGA3Q9Y5H0 SNORD56.1-201ENST00000362913 68 ntBASIC3.46□□□□□ -1.86
PCDHGA3Q9Y5H0 RNU6-310P-201ENST00000384655 107 ntBASIC3.46□□□□□ -1.86
PCDHGA3Q9Y5H0 SNORA41-201ENST00000384675 132 ntBASIC3.46□□□□□ -1.86
PCDHGA3Q9Y5H0 MIR490-201ENST00000384865 128 ntBASIC3.46□□□□□ -1.86
PCDHGA3Q9Y5H0 RNU6-174P-201ENST00000410406 106 ntBASIC3.46□□□□□ -1.86
PCDHGA3Q9Y5H0 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.46□□□□□ -1.86
PCDHGA3Q9Y5H0 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.46□□□□□ -1.86
PCDHGA3Q9Y5H0 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.46□□□□□ -1.86
PCDHGA3Q9Y5H0 OSTCP8-201ENST00000445117 448 ntBASIC3.46□□□□□ -1.86
PCDHGA3Q9Y5H0 FTH1P25-201ENST00000447665 469 ntBASIC3.46□□□□□ -1.86
PCDHGA3Q9Y5H0 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.46□□□□□ -1.86
PCDHGA3Q9Y5H0 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.46□□□□□ -1.86
PCDHGA3Q9Y5H0 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.46□□□□□ -1.86
PCDHGA3Q9Y5H0 AC109446.1-201ENST00000566172 220 ntBASIC3.46□□□□□ -1.86
PCDHGA3Q9Y5H0 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.46□□□□□ -1.86
PCDHGA3Q9Y5H0 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.46□□□□□ -1.86
PCDHGA3Q9Y5H0 AP001836.1-201ENST00000604675 523 ntBASIC3.46□□□□□ -1.86
PCDHGA3Q9Y5H0 AL627309.6-201ENST00000606857 840 ntBASIC3.46□□□□□ -1.86
PCDHGA3Q9Y5H0 uc_338.14-201ENST00000613162 166 ntBASIC3.46□□□□□ -1.86
PCDHGA3Q9Y5H0 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.46□□□□□ -1.86
PCDHGA3Q9Y5H0 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.46□□□□□ -1.86
PCDHGA3Q9Y5H0 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.46□□□□□ -1.86
PCDHGA3Q9Y5H0 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
PCDHGA3Q9Y5H0 AC007823.1-201ENST00000569932 1566 ntBASIC3.46□□□□□ -1.86
PCDHGA3Q9Y5H0 AC110774.1-201ENST00000623567 2018 ntBASIC3.46□□□□□ -1.86
PCDHGA3Q9Y5H0 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
PCDHGA3Q9Y5H0 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PCDHGA3Q9Y5H0 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
PCDHGA3Q9Y5H0 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PCDHGA3Q9Y5H0 MAPK10-322ENST00000641485 4530 ntBASIC3.45□□□□□ -1.86
PCDHGA3Q9Y5H0 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
PCDHGA3Q9Y5H0 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
PCDHGA3Q9Y5H0 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
PCDHGA3Q9Y5H0 Y_RNA.419-201ENST00000384041 102 ntBASIC3.45□□□□□ -1.86
PCDHGA3Q9Y5H0 Y_RNA.579-201ENST00000390939 94 ntBASIC3.45□□□□□ -1.86
PCDHGA3Q9Y5H0 SNORA75.6-201ENST00000391318 127 ntBASIC3.45□□□□□ -1.86
PCDHGA3Q9Y5H0 AL358075.3-201ENST00000426289 226 ntBASIC3.45□□□□□ -1.86
PCDHGA3Q9Y5H0 MTCO2P12-201ENST00000427426 682 ntBASIC3.45□□□□□ -1.86
PCDHGA3Q9Y5H0 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.45□□□□□ -1.86
PCDHGA3Q9Y5H0 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.45□□□□□ -1.86
PCDHGA3Q9Y5H0 RN7SL807P-201ENST00000470923 297 ntBASIC3.45□□□□□ -1.86
PCDHGA3Q9Y5H0 AC093663.1-201ENST00000497190 394 ntBASIC3.45□□□□□ -1.86
PCDHGA3Q9Y5H0 GZMAP1-201ENST00000503054 631 ntBASIC3.45□□□□□ -1.86
PCDHGA3Q9Y5H0 AC093303.1-201ENST00000514549 295 ntBASIC3.45□□□□□ -1.86
PCDHGA3Q9Y5H0 RNU6-264P-201ENST00000517134 104 ntBASIC3.45□□□□□ -1.86
PCDHGA3Q9Y5H0 SNORA31.23-201ENST00000517219 133 ntBASIC3.45□□□□□ -1.86
PCDHGA3Q9Y5H0 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.45□□□□□ -1.86
PCDHGA3Q9Y5H0 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.45□□□□□ -1.86
PCDHGA3Q9Y5H0 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.45□□□□□ -1.86
PCDHGA3Q9Y5H0 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.45□□□□□ -1.86
PCDHGA3Q9Y5H0 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.45□□□□□ -1.86
PCDHGA3Q9Y5H0 AC107294.3-201ENST00000609211 526 ntBASIC3.45□□□□□ -1.86
PCDHGA3Q9Y5H0 AC090617.7-201ENST00000623952 126 ntBASIC3.45□□□□□ -1.86
PCDHGA3Q9Y5H0 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.45□□□□□ -1.86
PCDHGA3Q9Y5H0 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.45□□□□□ -1.86
PCDHGA3Q9Y5H0 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.45□□□□□ -1.86
PCDHGA3Q9Y5H0 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PCDHGA3Q9Y5H0 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PCDHGA3Q9Y5H0 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.44□□□□□ -1.86
PCDHGA3Q9Y5H0 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
PCDHGA3Q9Y5H0 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
PCDHGA3Q9Y5H0 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PCDHGA3Q9Y5H0 Y_RNA.646-201ENST00000410980 101 ntBASIC3.44□□□□□ -1.86
PCDHGA3Q9Y5H0 EIF1AXP1-201ENST00000419267 435 ntBASIC3.44□□□□□ -1.86
PCDHGA3Q9Y5H0 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.44□□□□□ -1.86
PCDHGA3Q9Y5H0 RPL21P40-201ENST00000428586 483 ntBASIC3.44□□□□□ -1.86
PCDHGA3Q9Y5H0 AC005534.2-201ENST00000431047 433 ntBASIC3.44□□□□□ -1.86
PCDHGA3Q9Y5H0 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PCDHGA3Q9Y5H0 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.44□□□□□ -1.86
PCDHGA3Q9Y5H0 AC007969.2-201ENST00000441891 191 ntBASIC3.44□□□□□ -1.86
PCDHGA3Q9Y5H0 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.44□□□□□ -1.86
PCDHGA3Q9Y5H0 AC027575.1-201ENST00000481064 460 ntBASIC3.44□□□□□ -1.86
PCDHGA3Q9Y5H0 RPS27P26-201ENST00000494583 239 ntBASIC3.44□□□□□ -1.86
PCDHGA3Q9Y5H0 AC093249.1-201ENST00000567049 203 ntBASIC3.44□□□□□ -1.86
PCDHGA3Q9Y5H0 AC105137.2-201ENST00000569073 466 ntBASIC3.44□□□□□ -1.86
PCDHGA3Q9Y5H0 AL356055.1-201ENST00000602528 446 ntBASIC3.44□□□□□ -1.86
PCDHGA3Q9Y5H0 MIR3976-201ENST00000606807 139 ntBASIC3.44□□□□□ -1.86
PCDHGA3Q9Y5H0 AC007792.1-201ENST00000623023 402 ntBASIC3.44□□□□□ -1.86
PCDHGA3Q9Y5H0 AC138627.2-201ENST00000624202 601 ntBASIC3.44□□□□□ -1.86
PCDHGA3Q9Y5H0 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 139.6 ms