Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC008571.1-201ENST00000467232 300 ntBASIC3.85□□□□□ -1.79
CTDP1Q9Y5B0 RPL30P14-201ENST00000482744 348 ntBASIC3.85□□□□□ -1.79
CTDP1Q9Y5B0 RN7SL504P-201ENST00000494496 287 ntBASIC3.85□□□□□ -1.79
CTDP1Q9Y5B0 AC116655.1-201ENST00000508324 901 ntBASIC3.85□□□□□ -1.79
CTDP1Q9Y5B0 AC107934.2-201ENST00000518653 310 ntBASIC3.85□□□□□ -1.79
CTDP1Q9Y5B0 AP002404.1-201ENST00000532005 451 ntBASIC3.85□□□□□ -1.79
CTDP1Q9Y5B0 AC004024.1-201ENST00000549244 247 ntBASIC3.85□□□□□ -1.79
CTDP1Q9Y5B0 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.85□□□□□ -1.79
CTDP1Q9Y5B0 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.85□□□□□ -1.79
CTDP1Q9Y5B0 MIR1273C-201ENST00000578669 77 ntBASIC3.85□□□□□ -1.79
CTDP1Q9Y5B0 AC073657.2-201ENST00000605661 303 ntBASIC3.85□□□□□ -1.79
CTDP1Q9Y5B0 AL162274.2-201ENST00000614406 332 ntBASIC3.85□□□□□ -1.79
CTDP1Q9Y5B0 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.85□□□□□ -1.79
CTDP1Q9Y5B0 U4.1-201ENST00000620349 87 ntBASIC3.85□□□□□ -1.79
CTDP1Q9Y5B0 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
CTDP1Q9Y5B0 AC233263.6-201ENST00000631132 1963 ntBASIC3.85□□□□□ -1.79
CTDP1Q9Y5B0 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
CTDP1Q9Y5B0 FAM35CP-201ENST00000554755 2470 ntBASIC3.84□□□□□ -1.79
CTDP1Q9Y5B0 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CTDP1Q9Y5B0 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CTDP1Q9Y5B0 RNU6-505P-201ENST00000384427 107 ntBASIC3.84□□□□□ -1.79
CTDP1Q9Y5B0 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CTDP1Q9Y5B0 RNU2-3P-201ENST00000410144 191 ntBASIC3.84□□□□□ -1.79
CTDP1Q9Y5B0 TMEM167AP1-201ENST00000423409 219 ntBASIC3.84□□□□□ -1.79
CTDP1Q9Y5B0 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.84□□□□□ -1.79
CTDP1Q9Y5B0 AC093151.1-201ENST00000427711 313 ntBASIC3.84□□□□□ -1.79
CTDP1Q9Y5B0 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.84□□□□□ -1.79
CTDP1Q9Y5B0 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.84□□□□□ -1.79
CTDP1Q9Y5B0 AL157871.3-201ENST00000557231 293 ntBASIC3.84□□□□□ -1.79
CTDP1Q9Y5B0 AC110588.1-201ENST00000559699 137 ntBASIC3.84□□□□□ -1.79
CTDP1Q9Y5B0 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.84□□□□□ -1.79
CTDP1Q9Y5B0 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CTDP1Q9Y5B0 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.84□□□□□ -1.8
CTDP1Q9Y5B0 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CTDP1Q9Y5B0 Y_RNA.193-201ENST00000363979 102 ntBASIC3.83□□□□□ -1.8
CTDP1Q9Y5B0 RNU6-395P-201ENST00000365662 106 ntBASIC3.83□□□□□ -1.8
CTDP1Q9Y5B0 Y_RNA.389-201ENST00000383924 113 ntBASIC3.83□□□□□ -1.8
CTDP1Q9Y5B0 AL357075.1-201ENST00000404107 726 ntBASIC3.83□□□□□ -1.8
CTDP1Q9Y5B0 AL030996.1-201ENST00000411430 235 ntBASIC3.83□□□□□ -1.8
CTDP1Q9Y5B0 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.83□□□□□ -1.8
CTDP1Q9Y5B0 DPH3P2-201ENST00000422618 250 ntBASIC3.83□□□□□ -1.8
CTDP1Q9Y5B0 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.83□□□□□ -1.8
CTDP1Q9Y5B0 AL133396.1-201ENST00000432048 687 ntBASIC3.83□□□□□ -1.8
CTDP1Q9Y5B0 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.83□□□□□ -1.8
CTDP1Q9Y5B0 AC099799.1-201ENST00000439809 192 ntBASIC3.83□□□□□ -1.8
CTDP1Q9Y5B0 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.83□□□□□ -1.8
CTDP1Q9Y5B0 AC011816.1-201ENST00000441346 546 ntBASIC3.83□□□□□ -1.8
CTDP1Q9Y5B0 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.83□□□□□ -1.8
CTDP1Q9Y5B0 RPL7P5-201ENST00000471472 736 ntBASIC3.83□□□□□ -1.8
CTDP1Q9Y5B0 RPL21P13-201ENST00000488305 481 ntBASIC3.83□□□□□ -1.8
CTDP1Q9Y5B0 AC022493.1-201ENST00000492984 337 ntBASIC3.83□□□□□ -1.8
CTDP1Q9Y5B0 Y_RNA.721-201ENST00000517207 102 ntBASIC3.83□□□□□ -1.8
CTDP1Q9Y5B0 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.83□□□□□ -1.8
CTDP1Q9Y5B0 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.83□□□□□ -1.8
CTDP1Q9Y5B0 AL161670.1-201ENST00000554348 137 ntBASIC3.83□□□□□ -1.8
CTDP1Q9Y5B0 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.83□□□□□ -1.8
CTDP1Q9Y5B0 AC113195.1-201ENST00000579952 141 ntBASIC3.83□□□□□ -1.8
CTDP1Q9Y5B0 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.83□□□□□ -1.8
CTDP1Q9Y5B0 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.83□□□□□ -1.8
CTDP1Q9Y5B0 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.83□□□□□ -1.8
CTDP1Q9Y5B0 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.83□□□□□ -1.8
CTDP1Q9Y5B0 VN1R107P-201ENST00000601784 209 ntBASIC3.83□□□□□ -1.8
CTDP1Q9Y5B0 AC104695.3-201ENST00000604052 296 ntBASIC3.83□□□□□ -1.8
CTDP1Q9Y5B0 AL161798.1-201ENST00000604630 131 ntBASIC3.83□□□□□ -1.8
CTDP1Q9Y5B0 AP002826.1-201ENST00000608835 315 ntBASIC3.83□□□□□ -1.8
CTDP1Q9Y5B0 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.83□□□□□ -1.8
CTDP1Q9Y5B0 AL353743.1-202ENST00000431724 1695 ntBASIC3.83□□□□□ -1.8
CTDP1Q9Y5B0 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.83□□□□□ -1.8
CTDP1Q9Y5B0 AC091564.4-201ENST00000533934 2194 ntBASIC3.83□□□□□ -1.8
CTDP1Q9Y5B0 AC017071.1-201ENST00000564407 2204 ntBASIC3.83□□□□□ -1.8
CTDP1Q9Y5B0 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CTDP1Q9Y5B0 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CTDP1Q9Y5B0 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CTDP1Q9Y5B0 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CTDP1Q9Y5B0 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CTDP1Q9Y5B0 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.82□□□□□ -1.8
CTDP1Q9Y5B0 Y_RNA.33-201ENST00000362591 102 ntBASIC3.82□□□□□ -1.8
CTDP1Q9Y5B0 Y_RNA.39-201ENST00000362620 98 ntBASIC3.82□□□□□ -1.8
CTDP1Q9Y5B0 SNORA48.5-201ENST00000391143 135 ntBASIC3.82□□□□□ -1.8
CTDP1Q9Y5B0 Y_RNA.645-201ENST00000391229 102 ntBASIC3.82□□□□□ -1.8
CTDP1Q9Y5B0 RNU4-47P-201ENST00000410876 114 ntBASIC3.82□□□□□ -1.8
CTDP1Q9Y5B0 AC108059.2-201ENST00000434626 151 ntBASIC3.82□□□□□ -1.8
CTDP1Q9Y5B0 AL731563.1-201ENST00000442202 214 ntBASIC3.82□□□□□ -1.8
CTDP1Q9Y5B0 AC115115.1-201ENST00000449927 248 ntBASIC3.82□□□□□ -1.8
CTDP1Q9Y5B0 RNU1-86P-201ENST00000516108 154 ntBASIC3.82□□□□□ -1.8
CTDP1Q9Y5B0 MIR892C-201ENST00000516410 77 ntBASIC3.82□□□□□ -1.8
CTDP1Q9Y5B0 RNU1-107P-201ENST00000516617 154 ntBASIC3.82□□□□□ -1.8
CTDP1Q9Y5B0 RNU6-635P-201ENST00000516651 102 ntBASIC3.82□□□□□ -1.8
CTDP1Q9Y5B0 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.82□□□□□ -1.8
CTDP1Q9Y5B0 TRAV37-201ENST00000553906 342 ntBASIC3.82□□□□□ -1.8
CTDP1Q9Y5B0 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.82□□□□□ -1.8
CTDP1Q9Y5B0 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.82□□□□□ -1.8
CTDP1Q9Y5B0 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.82□□□□□ -1.8
CTDP1Q9Y5B0 MIR3668-201ENST00000582138 75 ntBASIC3.82□□□□□ -1.8
CTDP1Q9Y5B0 AL591516.1-201ENST00000611326 274 ntBASIC3.82□□□□□ -1.8
CTDP1Q9Y5B0 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.82□□□□□ -1.8
CTDP1Q9Y5B0 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.82□□□□□ -1.8
CTDP1Q9Y5B0 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CTDP1Q9Y5B0 AL356274.2-201ENST00000624379 3752 ntBASIC3.82□□□□□ -1.8
CTDP1Q9Y5B0 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 149.8 ms