Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.51□□□□□ -2.17
RCL1Q9Y2P8 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.51□□□□□ -2.17
RCL1Q9Y2P8 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.51□□□□□ -2.17
RCL1Q9Y2P8 AC027807.2-201ENST00000616099 408 ntBASIC1.51□□□□□ -2.17
RCL1Q9Y2P8 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
RCL1Q9Y2P8 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
RCL1Q9Y2P8 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 snoU2_19.1-201ENST00000362361 80 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 Y_RNA.99-201ENST00000363138 105 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 U8.2-201ENST00000363156 134 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 RNU5F-7P-201ENST00000363696 115 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 RNU5E-5P-201ENST00000365379 116 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 RNU6-61P-201ENST00000365528 109 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 RNU2-2P-201ENST00000410396 191 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 EEF1A1P40-201ENST00000412883 573 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 AC009310.1-201ENST00000414414 451 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 VN1R36P-201ENST00000414936 291 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 RPL21P90-201ENST00000415692 466 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 Z98742.3-201ENST00000418637 326 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 DPH3P2-201ENST00000422618 250 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 MTND4P20-201ENST00000424125 869 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 CALM2P2-201ENST00000428512 440 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 RPS15AP10-201ENST00000432472 382 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 USP9YP12-201ENST00000450481 570 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 RPL30P12-201ENST00000474666 353 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 MTND2P33-201ENST00000506452 1031 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 RBBP4P6-201ENST00000508098 202 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 MTCYBP40-201ENST00000509390 1135 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 RNU1-86P-201ENST00000516108 154 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 Y_RNA.672-201ENST00000516289 104 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 RNU1-107P-201ENST00000516617 154 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 RNU6-965P-201ENST00000516721 96 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 MTND2P32-201ENST00000521584 1038 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 AC007375.1-201ENST00000554513 578 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 HSBP1P1-201ENST00000555205 166 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 AC091544.4-201ENST00000555268 342 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 AC137800.2-201ENST00000574375 120 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 WISP1-OT1-201ENST00000602893 642 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 AC112191.3-201ENST00000604371 277 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 AL451064.1-201ENST00000607718 471 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 U2.15-201ENST00000611544 191 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 U2.16-201ENST00000613119 191 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 U2.12-201ENST00000613778 191 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 U2.20-201ENST00000613956 192 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 U2.9-201ENST00000615427 191 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 U2.11-201ENST00000616345 191 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 U2.2-201ENST00000616535 191 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 RMST_4.1-201ENST00000616886 107 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 U2.3-201ENST00000617785 191 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 U2.19-201ENST00000618602 191 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 RNU2-1-201ENST00000618664 191 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 U2.6-201ENST00000619225 191 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 U2.5-201ENST00000619465 191 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 AC022960.3-201ENST00000619794 441 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 U2.10-201ENST00000620268 191 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 AC019226.2-201ENST00000625973 424 ntBASIC1.5□□□□□ -2.17
RCL1Q9Y2P8 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
RCL1Q9Y2P8 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
RCL1Q9Y2P8 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
RCL1Q9Y2P8 RNU6-179P-201ENST00000363350 107 ntBASIC1.49□□□□□ -2.17
RCL1Q9Y2P8 RNU6-1214P-201ENST00000363650 109 ntBASIC1.49□□□□□ -2.17
RCL1Q9Y2P8 RNA5SP126-201ENST00000365092 109 ntBASIC1.49□□□□□ -2.17
RCL1Q9Y2P8 RN7SKP32-201ENST00000410167 303 ntBASIC1.49□□□□□ -2.17
RCL1Q9Y2P8 RNA5SP501-201ENST00000410990 112 ntBASIC1.49□□□□□ -2.17
RCL1Q9Y2P8 RN7SKP192-201ENST00000411291 327 ntBASIC1.49□□□□□ -2.17
RCL1Q9Y2P8 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.49□□□□□ -2.17
RCL1Q9Y2P8 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC1.49□□□□□ -2.17
RCL1Q9Y2P8 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.49□□□□□ -2.17
RCL1Q9Y2P8 IFNA20P-201ENST00000436840 528 ntBASIC1.49□□□□□ -2.17
RCL1Q9Y2P8 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.49□□□□□ -2.17
RCL1Q9Y2P8 RPL39P29-201ENST00000447779 157 ntBASIC1.49□□□□□ -2.17
RCL1Q9Y2P8 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.49□□□□□ -2.17
RCL1Q9Y2P8 RPL30P6-201ENST00000475925 342 ntBASIC1.49□□□□□ -2.17
RCL1Q9Y2P8 MTCO3P9-201ENST00000506989 781 ntBASIC1.49□□□□□ -2.17
RCL1Q9Y2P8 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.49□□□□□ -2.17
RCL1Q9Y2P8 AC008834.1-201ENST00000511612 175 ntBASIC1.49□□□□□ -2.17
RCL1Q9Y2P8 AC008549.1-201ENST00000512900 643 ntBASIC1.49□□□□□ -2.17
RCL1Q9Y2P8 RNU6-685P-201ENST00000517088 95 ntBASIC1.49□□□□□ -2.17
RCL1Q9Y2P8 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.49□□□□□ -2.17
RCL1Q9Y2P8 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.49□□□□□ -2.17
RCL1Q9Y2P8 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.49□□□□□ -2.17
RCL1Q9Y2P8 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.49□□□□□ -2.17
RCL1Q9Y2P8 MIR1273D-201ENST00000577266 86 ntBASIC1.49□□□□□ -2.17
RCL1Q9Y2P8 HMGN1P30-201ENST00000589286 268 ntBASIC1.49□□□□□ -2.17
RCL1Q9Y2P8 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
RCL1Q9Y2P8 AC245884.10-201ENST00000597355 337 ntBASIC1.49□□□□□ -2.17
RCL1Q9Y2P8 AC078795.2-201ENST00000602835 1252 ntBASIC1.49□□□□□ -2.17
RCL1Q9Y2P8 AC103810.8-201ENST00000607347 118 ntBASIC1.49□□□□□ -2.17
RCL1Q9Y2P8 AC013412.1-201ENST00000610687 192 ntBASIC1.49□□□□□ -2.17
RCL1Q9Y2P8 RMST_6.1-201ENST00000611980 203 ntBASIC1.49□□□□□ -2.17
RCL1Q9Y2P8 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms