Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.84□□□□□ -2.11
TRAPPC4Q9Y296 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.84□□□□□ -2.11
TRAPPC4Q9Y296 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.84□□□□□ -2.11
TRAPPC4Q9Y296 MTCO2P34-201ENST00000421994 607 ntBASIC1.84□□□□□ -2.11
TRAPPC4Q9Y296 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.84□□□□□ -2.11
TRAPPC4Q9Y296 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAPPC4Q9Y296 Z98742.2-201ENST00000431564 187 ntBASIC1.84□□□□□ -2.11
TRAPPC4Q9Y296 AC000111.3-201ENST00000433478 193 ntBASIC1.84□□□□□ -2.11
TRAPPC4Q9Y296 AL451074.3-201ENST00000437709 472 ntBASIC1.84□□□□□ -2.11
TRAPPC4Q9Y296 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.84□□□□□ -2.11
TRAPPC4Q9Y296 AL360221.1-201ENST00000445989 335 ntBASIC1.84□□□□□ -2.11
TRAPPC4Q9Y296 AL441985.1-201ENST00000457727 251 ntBASIC1.84□□□□□ -2.11
TRAPPC4Q9Y296 RNU7-182P-201ENST00000459009 62 ntBASIC1.84□□□□□ -2.11
TRAPPC4Q9Y296 AC011005.2-201ENST00000487324 359 ntBASIC1.84□□□□□ -2.11
TRAPPC4Q9Y296 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.84□□□□□ -2.11
TRAPPC4Q9Y296 AC079140.3-201ENST00000511111 550 ntBASIC1.84□□□□□ -2.11
TRAPPC4Q9Y296 RNA5SP112-201ENST00000515937 99 ntBASIC1.84□□□□□ -2.11
TRAPPC4Q9Y296 RNU5B-3P-201ENST00000516601 115 ntBASIC1.84□□□□□ -2.11
TRAPPC4Q9Y296 FAM92A1P1-201ENST00000528023 890 ntBASIC1.84□□□□□ -2.11
TRAPPC4Q9Y296 AP002963.1-201ENST00000530590 184 ntBASIC1.84□□□□□ -2.11
TRAPPC4Q9Y296 AC010186.2-204ENST00000537668 439 ntBASIC1.84□□□□□ -2.11
TRAPPC4Q9Y296 AC079598.5-201ENST00000547460 117 ntBASIC1.84□□□□□ -2.11
TRAPPC4Q9Y296 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAPPC4Q9Y296 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.84□□□□□ -2.11
TRAPPC4Q9Y296 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAPPC4Q9Y296 AL391840.1-201ENST00000571144 367 ntBASIC1.84□□□□□ -2.11
TRAPPC4Q9Y296 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAPPC4Q9Y296 AC090582.1-201ENST00000636321 199 ntBASIC1.84□□□□□ -2.11
TRAPPC4Q9Y296 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.12
TRAPPC4Q9Y296 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
TRAPPC4Q9Y296 SNORA16B-201ENST00000364674 135 ntBASIC1.83□□□□□ -2.12
TRAPPC4Q9Y296 RNA5SP126-201ENST00000365092 109 ntBASIC1.83□□□□□ -2.12
TRAPPC4Q9Y296 SNORA70B-201ENST00000384210 135 ntBASIC1.83□□□□□ -2.12
TRAPPC4Q9Y296 RNU6-456P-201ENST00000384493 107 ntBASIC1.83□□□□□ -2.12
TRAPPC4Q9Y296 RNU6-606P-201ENST00000384721 111 ntBASIC1.83□□□□□ -2.12
TRAPPC4Q9Y296 AL023284.1-201ENST00000403956 276 ntBASIC1.83□□□□□ -2.12
TRAPPC4Q9Y296 CDK8P2-201ENST00000415020 547 ntBASIC1.83□□□□□ -2.12
TRAPPC4Q9Y296 CYCSP48-201ENST00000417124 323 ntBASIC1.83□□□□□ -2.12
TRAPPC4Q9Y296 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.83□□□□□ -2.12
TRAPPC4Q9Y296 BX276092.3-201ENST00000424182 230 ntBASIC1.83□□□□□ -2.12
TRAPPC4Q9Y296 AL358934.1-201ENST00000432346 324 ntBASIC1.83□□□□□ -2.12
TRAPPC4Q9Y296 AL596276.1-201ENST00000434465 418 ntBASIC1.83□□□□□ -2.12
TRAPPC4Q9Y296 GPM6BP3-201ENST00000442797 145 ntBASIC1.83□□□□□ -2.12
TRAPPC4Q9Y296 Z83846.1-201ENST00000446798 265 ntBASIC1.83□□□□□ -2.12
TRAPPC4Q9Y296 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.83□□□□□ -2.12
TRAPPC4Q9Y296 AL162395.1-201ENST00000457882 422 ntBASIC1.83□□□□□ -2.12
TRAPPC4Q9Y296 DYNLL1P5-201ENST00000467158 270 ntBASIC1.83□□□□□ -2.12
TRAPPC4Q9Y296 MTAPP1-201ENST00000489154 819 ntBASIC1.83□□□□□ -2.12
TRAPPC4Q9Y296 ANXA2P1-201ENST00000505539 926 ntBASIC1.83□□□□□ -2.12
TRAPPC4Q9Y296 RNU1-86P-201ENST00000516108 154 ntBASIC1.83□□□□□ -2.12
TRAPPC4Q9Y296 RNU1-107P-201ENST00000516617 154 ntBASIC1.83□□□□□ -2.12
TRAPPC4Q9Y296 RNU7-193P-201ENST00000516723 65 ntBASIC1.83□□□□□ -2.12
TRAPPC4Q9Y296 AP004607.1-201ENST00000524456 203 ntBASIC1.83□□□□□ -2.12
TRAPPC4Q9Y296 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.83□□□□□ -2.12
TRAPPC4Q9Y296 AC135279.1-201ENST00000543493 504 ntBASIC1.83□□□□□ -2.12
TRAPPC4Q9Y296 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.83□□□□□ -2.12
TRAPPC4Q9Y296 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.83□□□□□ -2.12
TRAPPC4Q9Y296 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.83□□□□□ -2.12
TRAPPC4Q9Y296 AC105245.1-201ENST00000581934 244 ntBASIC1.83□□□□□ -2.12
TRAPPC4Q9Y296 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.83□□□□□ -2.12
TRAPPC4Q9Y296 AC073539.2-201ENST00000597113 165 ntBASIC1.83□□□□□ -2.12
TRAPPC4Q9Y296 Z84480.1-201ENST00000605131 311 ntBASIC1.83□□□□□ -2.12
TRAPPC4Q9Y296 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.83□□□□□ -2.12
TRAPPC4Q9Y296 AC091834.1-201ENST00000614543 472 ntBASIC1.83□□□□□ -2.12
TRAPPC4Q9Y296 uc_338.11-201ENST00000619132 160 ntBASIC1.83□□□□□ -2.12
TRAPPC4Q9Y296 AC136475.10-201ENST00000620253 385 ntBASIC1.83□□□□□ -2.12
TRAPPC4Q9Y296 SCARNA4-202ENST00000625402 129 ntBASIC1.83□□□□□ -2.12
TRAPPC4Q9Y296 SEPT14P19-203ENST00000633205 211 ntBASIC1.83□□□□□ -2.12
TRAPPC4Q9Y296 U6.114-201ENST00000636407 96 ntBASIC1.83□□□□□ -2.12
TRAPPC4Q9Y296 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
TRAPPC4Q9Y296 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
TRAPPC4Q9Y296 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
TRAPPC4Q9Y296 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
TRAPPC4Q9Y296 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
TRAPPC4Q9Y296 U8.2-201ENST00000363156 134 ntBASIC1.82□□□□□ -2.12
TRAPPC4Q9Y296 Y_RNA.159-201ENST00000363674 87 ntBASIC1.82□□□□□ -2.12
TRAPPC4Q9Y296 RNU6-1029P-201ENST00000384109 107 ntBASIC1.82□□□□□ -2.12
TRAPPC4Q9Y296 RNU6-1103P-201ENST00000384150 107 ntBASIC1.82□□□□□ -2.12
TRAPPC4Q9Y296 SNORD116-2-201ENST00000384274 95 ntBASIC1.82□□□□□ -2.12
TRAPPC4Q9Y296 SNORA67.3-201ENST00000384366 140 ntBASIC1.82□□□□□ -2.12
TRAPPC4Q9Y296 SNORD116-6-201ENST00000384711 96 ntBASIC1.82□□□□□ -2.12
TRAPPC4Q9Y296 MIR218-1-201ENST00000384999 110 ntBASIC1.82□□□□□ -2.12
TRAPPC4Q9Y296 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
TRAPPC4Q9Y296 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.82□□□□□ -2.12
TRAPPC4Q9Y296 RNU2-3P-201ENST00000410144 191 ntBASIC1.82□□□□□ -2.12
TRAPPC4Q9Y296 RNU6-607P-201ENST00000411283 108 ntBASIC1.82□□□□□ -2.12
TRAPPC4Q9Y296 RPL21P90-201ENST00000415692 466 ntBASIC1.82□□□□□ -2.12
TRAPPC4Q9Y296 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.82□□□□□ -2.12
TRAPPC4Q9Y296 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.82□□□□□ -2.12
TRAPPC4Q9Y296 EIF4EP4-201ENST00000424916 578 ntBASIC1.82□□□□□ -2.12
TRAPPC4Q9Y296 HMGN2P19-201ENST00000425149 265 ntBASIC1.82□□□□□ -2.12
TRAPPC4Q9Y296 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.82□□□□□ -2.12
TRAPPC4Q9Y296 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
TRAPPC4Q9Y296 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.82□□□□□ -2.12
TRAPPC4Q9Y296 CALM1P1-201ENST00000442082 433 ntBASIC1.82□□□□□ -2.12
TRAPPC4Q9Y296 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.82□□□□□ -2.12
TRAPPC4Q9Y296 PSPHP1-201ENST00000450062 261 ntBASIC1.82□□□□□ -2.12
TRAPPC4Q9Y296 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.82□□□□□ -2.12
TRAPPC4Q9Y296 MED28P2-201ENST00000475771 317 ntBASIC1.82□□□□□ -2.12
TRAPPC4Q9Y296 TRBV12-1-201ENST00000479785 344 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 149.6 ms