Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LHX6Q9UPM6 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LHX6Q9UPM6 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
LHX6Q9UPM6 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
LHX6Q9UPM6 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
LHX6Q9UPM6 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LHX6Q9UPM6 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.05□□□□□ -1.6
LHX6Q9UPM6 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
LHX6Q9UPM6 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LHX6Q9UPM6 Y_RNA.66-201ENST00000362862 102 ntBASIC5.05□□□□□ -1.6
LHX6Q9UPM6 RN7SKP280-201ENST00000364196 304 ntBASIC5.05□□□□□ -1.6
LHX6Q9UPM6 U3.10-201ENST00000364459 214 ntBASIC5.05□□□□□ -1.6
LHX6Q9UPM6 MIR134-201ENST00000385258 73 ntBASIC5.05□□□□□ -1.6
LHX6Q9UPM6 MIR759-201ENST00000390224 91 ntBASIC5.05□□□□□ -1.6
LHX6Q9UPM6 RN7SKP17-201ENST00000411242 351 ntBASIC5.05□□□□□ -1.6
LHX6Q9UPM6 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.05□□□□□ -1.6
LHX6Q9UPM6 HMGN2P10-201ENST00000448085 265 ntBASIC5.05□□□□□ -1.6
LHX6Q9UPM6 AL645939.1-201ENST00000453429 797 ntBASIC5.05□□□□□ -1.6
LHX6Q9UPM6 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.05□□□□□ -1.6
LHX6Q9UPM6 HMGB1P22-201ENST00000505315 124 ntBASIC5.05□□□□□ -1.6
LHX6Q9UPM6 SCARNA16.4-201ENST00000516956 187 ntBASIC5.05□□□□□ -1.6
LHX6Q9UPM6 ACA59.2-201ENST00000517061 156 ntBASIC5.05□□□□□ -1.6
LHX6Q9UPM6 AC105137.2-201ENST00000569073 466 ntBASIC5.05□□□□□ -1.6
LHX6Q9UPM6 RPL23AP91-201ENST00000569211 455 ntBASIC5.05□□□□□ -1.6
LHX6Q9UPM6 MIR4277-201ENST00000578298 84 ntBASIC5.05□□□□□ -1.6
LHX6Q9UPM6 Pinc.1-201ENST00000616452 154 ntBASIC5.05□□□□□ -1.6
LHX6Q9UPM6 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.05□□□□□ -1.6
LHX6Q9UPM6 AC006065.5-201ENST00000623427 349 ntBASIC5.05□□□□□ -1.6
LHX6Q9UPM6 AC138965.3-201ENST00000623875 498 ntBASIC5.05□□□□□ -1.6
LHX6Q9UPM6 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.05□□□□□ -1.6
LHX6Q9UPM6 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
LHX6Q9UPM6 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
LHX6Q9UPM6 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
LHX6Q9UPM6 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
LHX6Q9UPM6 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
LHX6Q9UPM6 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LHX6Q9UPM6 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.04□□□□□ -1.6
LHX6Q9UPM6 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LHX6Q9UPM6 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LHX6Q9UPM6 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.04□□□□□ -1.6
LHX6Q9UPM6 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LHX6Q9UPM6 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LHX6Q9UPM6 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LHX6Q9UPM6 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LHX6Q9UPM6 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LHX6Q9UPM6 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.04□□□□□ -1.6
LHX6Q9UPM6 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LHX6Q9UPM6 RNU6-1138P-201ENST00000365359 106 ntBASIC5.04□□□□□ -1.6
LHX6Q9UPM6 RNU6-1292P-201ENST00000383856 107 ntBASIC5.04□□□□□ -1.6
LHX6Q9UPM6 CRIP1P1-201ENST00000427567 185 ntBASIC5.04□□□□□ -1.6
LHX6Q9UPM6 AC073465.2-201ENST00000440938 498 ntBASIC5.04□□□□□ -1.6
LHX6Q9UPM6 RPS27AP10-201ENST00000496103 208 ntBASIC5.04□□□□□ -1.6
LHX6Q9UPM6 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC5.04□□□□□ -1.6
LHX6Q9UPM6 MIR3129-201ENST00000581095 76 ntBASIC5.04□□□□□ -1.6
LHX6Q9UPM6 AL133481.2-203ENST00000607558 139 ntBASIC5.04□□□□□ -1.6
LHX6Q9UPM6 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC5.04□□□□□ -1.6
LHX6Q9UPM6 AC002064.3-201ENST00000623448 346 ntBASIC5.04□□□□□ -1.6
LHX6Q9UPM6 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC5.04□□□□□ -1.6
LHX6Q9UPM6 MIR4662A-201ENST00000637499 67 ntBASIC5.04□□□□□ -1.6
LHX6Q9UPM6 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.04□□□□□ -1.6
LHX6Q9UPM6 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LHX6Q9UPM6 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LHX6Q9UPM6 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LHX6Q9UPM6 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.03□□□□□ -1.6
LHX6Q9UPM6 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LHX6Q9UPM6 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
LHX6Q9UPM6 AL034549.2-201ENST00000618285 3373 ntBASIC5.03□□□□□ -1.6
LHX6Q9UPM6 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.03□□□□□ -1.6
LHX6Q9UPM6 GVINP1-202ENST00000531871 7271 ntBASIC5.03□□□□□ -1.6
LHX6Q9UPM6 AL356292.1-201ENST00000283110 373 ntBASIC5.03□□□□□ -1.6
LHX6Q9UPM6 RNU6-600P-201ENST00000362524 99 ntBASIC5.03□□□□□ -1.6
LHX6Q9UPM6 RNU6-24P-201ENST00000384440 107 ntBASIC5.03□□□□□ -1.6
LHX6Q9UPM6 SNORA37-201ENST00000384504 129 ntBASIC5.03□□□□□ -1.6
LHX6Q9UPM6 AL117342.1-201ENST00000404861 406 ntBASIC5.03□□□□□ -1.6
LHX6Q9UPM6 SNORA11.1-201ENST00000408133 129 ntBASIC5.03□□□□□ -1.6
LHX6Q9UPM6 RPL7AP49-201ENST00000429522 581 ntBASIC5.03□□□□□ -1.6
LHX6Q9UPM6 BX276092.6-201ENST00000430476 250 ntBASIC5.03□□□□□ -1.6
LHX6Q9UPM6 AL591438.1-201ENST00000433508 581 ntBASIC5.03□□□□□ -1.6
LHX6Q9UPM6 KRT8P51-201ENST00000438938 274 ntBASIC5.03□□□□□ -1.6
LHX6Q9UPM6 BX276092.8-201ENST00000455722 250 ntBASIC5.03□□□□□ -1.6
LHX6Q9UPM6 snoU13.4-201ENST00000458916 104 ntBASIC5.03□□□□□ -1.6
LHX6Q9UPM6 SNORD11-201ENST00000459124 84 ntBASIC5.03□□□□□ -1.6
LHX6Q9UPM6 SNORA84-201ENST00000459229 133 ntBASIC5.03□□□□□ -1.6
LHX6Q9UPM6 AC090602.1-201ENST00000469695 252 ntBASIC5.03□□□□□ -1.6
LHX6Q9UPM6 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.03□□□□□ -1.6
LHX6Q9UPM6 AC034105.4-201ENST00000568304 277 ntBASIC5.03□□□□□ -1.6
LHX6Q9UPM6 MIR4429-201ENST00000580105 73 ntBASIC5.03□□□□□ -1.6
LHX6Q9UPM6 RNA5SP108-201ENST00000605921 117 ntBASIC5.03□□□□□ -1.6
LHX6Q9UPM6 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LHX6Q9UPM6 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
LHX6Q9UPM6 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.03□□□□□ -1.6
LHX6Q9UPM6 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.03□□□□□ -1.6
LHX6Q9UPM6 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LHX6Q9UPM6 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LHX6Q9UPM6 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.02□□□□□ -1.61
LHX6Q9UPM6 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LHX6Q9UPM6 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LHX6Q9UPM6 RNU4-15P-201ENST00000362613 141 ntBASIC5.02□□□□□ -1.61
LHX6Q9UPM6 RNU6-335P-201ENST00000364563 113 ntBASIC5.02□□□□□ -1.61
LHX6Q9UPM6 Y_RNA.265-201ENST00000364677 108 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms