Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
SYNPO2Q9UMS6 MIR412-201ENST00000362142 91 ntBASIC3.8□□□□□ -1.8
SYNPO2Q9UMS6 Y_RNA.133-201ENST00000363428 110 ntBASIC3.8□□□□□ -1.8
SYNPO2Q9UMS6 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SYNPO2Q9UMS6 SNORA7.4-201ENST00000384249 137 ntBASIC3.8□□□□□ -1.8
SYNPO2Q9UMS6 MRPL42P3-201ENST00000401492 326 ntBASIC3.8□□□□□ -1.8
SYNPO2Q9UMS6 RNU6-325P-201ENST00000411132 105 ntBASIC3.8□□□□□ -1.8
SYNPO2Q9UMS6 YPEL5P1-201ENST00000419731 367 ntBASIC3.8□□□□□ -1.8
SYNPO2Q9UMS6 RPL23AP50-201ENST00000434149 455 ntBASIC3.8□□□□□ -1.8
SYNPO2Q9UMS6 NDUFB4P6-201ENST00000436819 366 ntBASIC3.8□□□□□ -1.8
SYNPO2Q9UMS6 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.8□□□□□ -1.8
SYNPO2Q9UMS6 AC008571.1-201ENST00000467232 300 ntBASIC3.8□□□□□ -1.8
SYNPO2Q9UMS6 RPL27AP5-201ENST00000469428 449 ntBASIC3.8□□□□□ -1.8
SYNPO2Q9UMS6 RPS29P2-201ENST00000479278 136 ntBASIC3.8□□□□□ -1.8
SYNPO2Q9UMS6 TRAV32-201ENST00000553993 340 ntBASIC3.8□□□□□ -1.8
SYNPO2Q9UMS6 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.8□□□□□ -1.8
SYNPO2Q9UMS6 TGIF1P1-201ENST00000558095 802 ntBASIC3.8□□□□□ -1.8
SYNPO2Q9UMS6 AC109446.1-201ENST00000566172 220 ntBASIC3.8□□□□□ -1.8
SYNPO2Q9UMS6 AC005000.2-201ENST00000605468 310 ntBASIC3.8□□□□□ -1.8
SYNPO2Q9UMS6 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.8□□□□□ -1.8
SYNPO2Q9UMS6 MIR3976-201ENST00000606807 139 ntBASIC3.8□□□□□ -1.8
SYNPO2Q9UMS6 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.8□□□□□ -1.8
SYNPO2Q9UMS6 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.8□□□□□ -1.8
SYNPO2Q9UMS6 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SYNPO2Q9UMS6 AL035425.3-201ENST00000564206 4996 ntBASIC3.79□□□□□ -1.8
SYNPO2Q9UMS6 Y_RNA.80-201ENST00000362996 102 ntBASIC3.79□□□□□ -1.8
SYNPO2Q9UMS6 RNU6-1309P-201ENST00000363305 108 ntBASIC3.79□□□□□ -1.8
SYNPO2Q9UMS6 SNORD14B-201ENST00000364533 90 ntBASIC3.79□□□□□ -1.8
SYNPO2Q9UMS6 Y_RNA.252-201ENST00000364556 101 ntBASIC3.79□□□□□ -1.8
SYNPO2Q9UMS6 RNU6-26P-201ENST00000383985 107 ntBASIC3.79□□□□□ -1.8
SYNPO2Q9UMS6 Y_RNA.485-201ENST00000384395 102 ntBASIC3.79□□□□□ -1.8
SYNPO2Q9UMS6 RNU6-790P-201ENST00000384479 105 ntBASIC3.79□□□□□ -1.8
SYNPO2Q9UMS6 MIR23A-201ENST00000385245 73 ntBASIC3.79□□□□□ -1.8
SYNPO2Q9UMS6 Y_RNA.623-201ENST00000411128 95 ntBASIC3.79□□□□□ -1.8
SYNPO2Q9UMS6 AC096664.2-201ENST00000411843 406 ntBASIC3.79□□□□□ -1.8
SYNPO2Q9UMS6 MRPS18CP6-201ENST00000423587 223 ntBASIC3.79□□□□□ -1.8
SYNPO2Q9UMS6 BX276092.3-201ENST00000424182 230 ntBASIC3.79□□□□□ -1.8
SYNPO2Q9UMS6 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.79□□□□□ -1.8
SYNPO2Q9UMS6 AC008267.5-201ENST00000424928 265 ntBASIC3.79□□□□□ -1.8
SYNPO2Q9UMS6 AL358176.2-201ENST00000425769 204 ntBASIC3.79□□□□□ -1.8
SYNPO2Q9UMS6 AL133396.1-201ENST00000432048 687 ntBASIC3.79□□□□□ -1.8
SYNPO2Q9UMS6 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.79□□□□□ -1.8
SYNPO2Q9UMS6 AL031274.1-201ENST00000450334 232 ntBASIC3.79□□□□□ -1.8
SYNPO2Q9UMS6 MTND5P22-201ENST00000458380 195 ntBASIC3.79□□□□□ -1.8
SYNPO2Q9UMS6 MTATP8P1-201ENST00000467115 207 ntBASIC3.79□□□□□ -1.8
SYNPO2Q9UMS6 AL135752.1-201ENST00000479477 471 ntBASIC3.79□□□□□ -1.8
SYNPO2Q9UMS6 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.79□□□□□ -1.8
SYNPO2Q9UMS6 RPL30P5-201ENST00000494923 336 ntBASIC3.79□□□□□ -1.8
SYNPO2Q9UMS6 SNORA31.19-201ENST00000517079 126 ntBASIC3.79□□□□□ -1.8
SYNPO2Q9UMS6 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.79□□□□□ -1.8
SYNPO2Q9UMS6 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SYNPO2Q9UMS6 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.79□□□□□ -1.8
SYNPO2Q9UMS6 MIR2682-201ENST00000580305 110 ntBASIC3.79□□□□□ -1.8
SYNPO2Q9UMS6 AC136601.2-201ENST00000604356 474 ntBASIC3.79□□□□□ -1.8
SYNPO2Q9UMS6 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.79□□□□□ -1.8
SYNPO2Q9UMS6 MIR622-201ENST00000638396 96 ntBASIC3.79□□□□□ -1.8
SYNPO2Q9UMS6 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SYNPO2Q9UMS6 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.79□□□□□ -1.8
SYNPO2Q9UMS6 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
SYNPO2Q9UMS6 ZNF807-201ENST00000328088 1707 ntBASIC3.78□□□□□ -1.8
SYNPO2Q9UMS6 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SYNPO2Q9UMS6 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.78□□□□□ -1.8
SYNPO2Q9UMS6 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SYNPO2Q9UMS6 RNA5SP374-201ENST00000362939 125 ntBASIC3.78□□□□□ -1.8
SYNPO2Q9UMS6 RNU6-490P-201ENST00000362985 107 ntBASIC3.78□□□□□ -1.8
SYNPO2Q9UMS6 Y_RNA.144-201ENST00000363521 113 ntBASIC3.78□□□□□ -1.8
SYNPO2Q9UMS6 RNU6-525P-201ENST00000363685 104 ntBASIC3.78□□□□□ -1.8
SYNPO2Q9UMS6 Y_RNA.364-201ENST00000365532 101 ntBASIC3.78□□□□□ -1.8
SYNPO2Q9UMS6 Y_RNA.527-201ENST00000384573 102 ntBASIC3.78□□□□□ -1.8
SYNPO2Q9UMS6 MIR10A-201ENST00000385043 110 ntBASIC3.78□□□□□ -1.8
SYNPO2Q9UMS6 U3.42-201ENST00000408746 214 ntBASIC3.78□□□□□ -1.8
SYNPO2Q9UMS6 RNU6-55P-201ENST00000411092 107 ntBASIC3.78□□□□□ -1.8
SYNPO2Q9UMS6 SNORD56-201ENST00000413522 71 ntBASIC3.78□□□□□ -1.8
SYNPO2Q9UMS6 AL356968.1-201ENST00000416622 474 ntBASIC3.78□□□□□ -1.8
SYNPO2Q9UMS6 AL096701.2-201ENST00000416920 238 ntBASIC3.78□□□□□ -1.8
SYNPO2Q9UMS6 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.78□□□□□ -1.8
SYNPO2Q9UMS6 AC007560.1-201ENST00000426912 237 ntBASIC3.78□□□□□ -1.8
SYNPO2Q9UMS6 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.78□□□□□ -1.8
SYNPO2Q9UMS6 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.78□□□□□ -1.8
SYNPO2Q9UMS6 AC092573.2-201ENST00000434546 243 ntBASIC3.78□□□□□ -1.8
SYNPO2Q9UMS6 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.78□□□□□ -1.8
SYNPO2Q9UMS6 snoU109.2-201ENST00000459316 135 ntBASIC3.78□□□□□ -1.8
SYNPO2Q9UMS6 FO393415.2-201ENST00000480085 343 ntBASIC3.78□□□□□ -1.8
SYNPO2Q9UMS6 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.78□□□□□ -1.8
SYNPO2Q9UMS6 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.78□□□□□ -1.8
SYNPO2Q9UMS6 RNU6-572P-201ENST00000516724 80 ntBASIC3.78□□□□□ -1.8
SYNPO2Q9UMS6 SNORA31.26-201ENST00000517250 137 ntBASIC3.78□□□□□ -1.8
SYNPO2Q9UMS6 RNVU1-4-201ENST00000612985 164 ntBASIC3.78□□□□□ -1.8
SYNPO2Q9UMS6 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.78□□□□□ -1.8
SYNPO2Q9UMS6 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
SYNPO2Q9UMS6 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
SYNPO2Q9UMS6 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.77□□□□□ -1.81
SYNPO2Q9UMS6 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SYNPO2Q9UMS6 Y_RNA.158-201ENST00000363651 101 ntBASIC3.77□□□□□ -1.81
SYNPO2Q9UMS6 RNU6-827P-201ENST00000365553 106 ntBASIC3.77□□□□□ -1.81
SYNPO2Q9UMS6 RNU6-166P-201ENST00000384371 107 ntBASIC3.77□□□□□ -1.81
SYNPO2Q9UMS6 SNORA40C-201ENST00000391285 128 ntBASIC3.77□□□□□ -1.81
SYNPO2Q9UMS6 RNU6-985P-201ENST00000410182 104 ntBASIC3.77□□□□□ -1.81
SYNPO2Q9UMS6 RNU2-68P-201ENST00000410878 191 ntBASIC3.77□□□□□ -1.81
SYNPO2Q9UMS6 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms