Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 RNU6-1325P-201ENST00000364905 105 ntBASIC4.94□□□□□ -1.62
COL17A1Q9UMD9 Y_RNA.383-201ENST00000383855 97 ntBASIC4.94□□□□□ -1.62
COL17A1Q9UMD9 RNU6-658P-201ENST00000384606 106 ntBASIC4.94□□□□□ -1.62
COL17A1Q9UMD9 SNORA53-201ENST00000391141 249 ntBASIC4.94□□□□□ -1.62
COL17A1Q9UMD9 RPS26P47-201ENST00000427219 348 ntBASIC4.94□□□□□ -1.62
COL17A1Q9UMD9 HMGB3P21-201ENST00000452483 547 ntBASIC4.94□□□□□ -1.62
COL17A1Q9UMD9 SCARNA18-201ENST00000459004 134 ntBASIC4.94□□□□□ -1.62
COL17A1Q9UMD9 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.94□□□□□ -1.62
COL17A1Q9UMD9 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.94□□□□□ -1.62
COL17A1Q9UMD9 CR383656.7-201ENST00000548164 174 ntBASIC4.94□□□□□ -1.62
COL17A1Q9UMD9 AC109446.1-201ENST00000566172 220 ntBASIC4.94□□□□□ -1.62
COL17A1Q9UMD9 AC006254.2-201ENST00000603259 279 ntBASIC4.94□□□□□ -1.62
COL17A1Q9UMD9 AC022149.2-201ENST00000621061 203 ntBASIC4.94□□□□□ -1.62
COL17A1Q9UMD9 BX322639.1-202ENST00000423987 2213 ntBASIC4.93□□□□□ -1.62
COL17A1Q9UMD9 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.93□□□□□ -1.62
COL17A1Q9UMD9 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
COL17A1Q9UMD9 AL451142.2-201ENST00000429076 2090 ntBASIC4.93□□□□□ -1.62
COL17A1Q9UMD9 PSMA2P3-201ENST00000429685 675 ntBASIC4.93□□□□□ -1.62
COL17A1Q9UMD9 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.93□□□□□ -1.62
COL17A1Q9UMD9 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.93□□□□□ -1.62
COL17A1Q9UMD9 APOOP4-201ENST00000513530 597 ntBASIC4.93□□□□□ -1.62
COL17A1Q9UMD9 AC005798.1-201ENST00000513715 387 ntBASIC4.93□□□□□ -1.62
COL17A1Q9UMD9 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL17A1Q9UMD9 MIR4293-201ENST00000584305 78 ntBASIC4.93□□□□□ -1.62
COL17A1Q9UMD9 ELOCP29-201ENST00000588193 334 ntBASIC4.93□□□□□ -1.62
COL17A1Q9UMD9 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL17A1Q9UMD9 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL17A1Q9UMD9 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.92□□□□□ -1.62
COL17A1Q9UMD9 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
COL17A1Q9UMD9 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
COL17A1Q9UMD9 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL17A1Q9UMD9 RNU6-339P-201ENST00000384310 107 ntBASIC4.92□□□□□ -1.62
COL17A1Q9UMD9 RNA5SP219-201ENST00000390940 113 ntBASIC4.92□□□□□ -1.62
COL17A1Q9UMD9 RNU6-550P-201ENST00000391057 101 ntBASIC4.92□□□□□ -1.62
COL17A1Q9UMD9 RNU6-1156P-201ENST00000410365 100 ntBASIC4.92□□□□□ -1.62
COL17A1Q9UMD9 RN7SKP220-201ENST00000410611 288 ntBASIC4.92□□□□□ -1.62
COL17A1Q9UMD9 RNA5SP229-201ENST00000410809 99 ntBASIC4.92□□□□□ -1.62
COL17A1Q9UMD9 RPL7P37-201ENST00000425095 738 ntBASIC4.92□□□□□ -1.62
COL17A1Q9UMD9 MRPS18BP2-201ENST00000434310 759 ntBASIC4.92□□□□□ -1.62
COL17A1Q9UMD9 AL353597.2-202ENST00000434901 373 ntBASIC4.92□□□□□ -1.62
COL17A1Q9UMD9 TBCAP3-201ENST00000512475 312 ntBASIC4.92□□□□□ -1.62
COL17A1Q9UMD9 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.92□□□□□ -1.62
COL17A1Q9UMD9 RNA5SP367-201ENST00000516557 118 ntBASIC4.92□□□□□ -1.62
COL17A1Q9UMD9 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL17A1Q9UMD9 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
COL17A1Q9UMD9 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC4.92□□□□□ -1.62
COL17A1Q9UMD9 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC4.92□□□□□ -1.62
COL17A1Q9UMD9 AC072026.1-201ENST00000605023 201 ntBASIC4.92□□□□□ -1.62
COL17A1Q9UMD9 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.92□□□□□ -1.62
COL17A1Q9UMD9 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
COL17A1Q9UMD9 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL17A1Q9UMD9 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.91□□□□□ -1.62
COL17A1Q9UMD9 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
COL17A1Q9UMD9 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
COL17A1Q9UMD9 snoU2_19.2-201ENST00000363024 80 ntBASIC4.91□□□□□ -1.62
COL17A1Q9UMD9 Y_RNA.183-201ENST00000363882 113 ntBASIC4.91□□□□□ -1.62
COL17A1Q9UMD9 RNU6-611P-201ENST00000384276 104 ntBASIC4.91□□□□□ -1.62
COL17A1Q9UMD9 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.91□□□□□ -1.62
COL17A1Q9UMD9 AL445305.1-201ENST00000432577 575 ntBASIC4.91□□□□□ -1.62
COL17A1Q9UMD9 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.91□□□□□ -1.62
COL17A1Q9UMD9 FABP5P13-201ENST00000452144 328 ntBASIC4.91□□□□□ -1.62
COL17A1Q9UMD9 RNU7-169P-201ENST00000459456 61 ntBASIC4.91□□□□□ -1.62
COL17A1Q9UMD9 RPS20P22-201ENST00000473700 357 ntBASIC4.91□□□□□ -1.62
COL17A1Q9UMD9 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4.91□□□□□ -1.62
COL17A1Q9UMD9 RN7SKP277-201ENST00000516895 283 ntBASIC4.91□□□□□ -1.62
COL17A1Q9UMD9 AC112693.2-201ENST00000556538 232 ntBASIC4.91□□□□□ -1.62
COL17A1Q9UMD9 H3F3AP1-201ENST00000559984 334 ntBASIC4.91□□□□□ -1.62
COL17A1Q9UMD9 MIR4425-201ENST00000580572 84 ntBASIC4.91□□□□□ -1.62
COL17A1Q9UMD9 MIR4512-201ENST00000583257 77 ntBASIC4.91□□□□□ -1.62
COL17A1Q9UMD9 Z83818.1-201ENST00000603584 150 ntBASIC4.91□□□□□ -1.62
COL17A1Q9UMD9 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.91□□□□□ -1.62
COL17A1Q9UMD9 AL590240.4-201ENST00000616908 390 ntBASIC4.91□□□□□ -1.62
COL17A1Q9UMD9 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL17A1Q9UMD9 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.91□□□□□ -1.62
COL17A1Q9UMD9 Y_RNA.76-201ENST00000362931 109 ntBASIC4.9□□□□□ -1.62
COL17A1Q9UMD9 RNU6-128P-201ENST00000383976 107 ntBASIC4.9□□□□□ -1.62
COL17A1Q9UMD9 SNORA70B-201ENST00000384210 135 ntBASIC4.9□□□□□ -1.62
COL17A1Q9UMD9 Y_RNA.526-201ENST00000384572 110 ntBASIC4.9□□□□□ -1.62
COL17A1Q9UMD9 RNU6-821P-201ENST00000390995 107 ntBASIC4.9□□□□□ -1.62
COL17A1Q9UMD9 RNU6-131P-201ENST00000391144 107 ntBASIC4.9□□□□□ -1.62
COL17A1Q9UMD9 AL583834.1-201ENST00000406943 343 ntBASIC4.9□□□□□ -1.62
COL17A1Q9UMD9 RNU6-130P-201ENST00000411112 103 ntBASIC4.9□□□□□ -1.62
COL17A1Q9UMD9 AC140059.1-201ENST00000489238 361 ntBASIC4.9□□□□□ -1.62
COL17A1Q9UMD9 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
COL17A1Q9UMD9 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.9□□□□□ -1.62
COL17A1Q9UMD9 RNU6-1332P-201ENST00000516666 104 ntBASIC4.9□□□□□ -1.62
COL17A1Q9UMD9 MRPS18CP4-201ENST00000535821 231 ntBASIC4.9□□□□□ -1.62
COL17A1Q9UMD9 MIR4716-201ENST00000579628 84 ntBASIC4.9□□□□□ -1.62
COL17A1Q9UMD9 HMGN2P28-201ENST00000606102 262 ntBASIC4.9□□□□□ -1.62
COL17A1Q9UMD9 AC243829.7-201ENST00000633081 225 ntBASIC4.9□□□□□ -1.62
COL17A1Q9UMD9 U6.106-201ENST00000636360 105 ntBASIC4.9□□□□□ -1.62
COL17A1Q9UMD9 AC073073.2-201ENST00000609827 2578 ntBASIC4.9□□□□□ -1.62
COL17A1Q9UMD9 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
COL17A1Q9UMD9 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.9□□□□□ -1.63
COL17A1Q9UMD9 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.9□□□□□ -1.63
COL17A1Q9UMD9 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL17A1Q9UMD9 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL17A1Q9UMD9 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
COL17A1Q9UMD9 Y_RNA.16-201ENST00000362421 102 ntBASIC4.89□□□□□ -1.63
COL17A1Q9UMD9 RNU6-1135P-201ENST00000411083 103 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms