Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 AL353778.1-201ENST00000603149 408 ntBASIC1.9□□□□□ -2.11
CDH9Q9ULB4 AL096840.1-201ENST00000603287 93 ntBASIC1.9□□□□□ -2.11
CDH9Q9ULB4 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.9□□□□□ -2.11
CDH9Q9ULB4 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.9□□□□□ -2.11
CDH9Q9ULB4 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
CDH9Q9ULB4 ZNF702P-202ENST00000434269 1966 ntBASIC1.9□□□□□ -2.11
CDH9Q9ULB4 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CDH9Q9ULB4 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.89□□□□□ -2.11
CDH9Q9ULB4 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.89□□□□□ -2.11
CDH9Q9ULB4 Y_RNA.22-201ENST00000362492 102 ntBASIC1.89□□□□□ -2.11
CDH9Q9ULB4 RNU6-529P-201ENST00000363383 104 ntBASIC1.89□□□□□ -2.11
CDH9Q9ULB4 RNU6-61P-201ENST00000365528 109 ntBASIC1.89□□□□□ -2.11
CDH9Q9ULB4 MIR518A2-201ENST00000384966 87 ntBASIC1.89□□□□□ -2.11
CDH9Q9ULB4 RNA5SP450-201ENST00000411206 102 ntBASIC1.89□□□□□ -2.11
CDH9Q9ULB4 AC096920.1-201ENST00000423991 241 ntBASIC1.89□□□□□ -2.11
CDH9Q9ULB4 UBE2D3P4-201ENST00000441973 436 ntBASIC1.89□□□□□ -2.11
CDH9Q9ULB4 AL360271.2-201ENST00000447710 161 ntBASIC1.89□□□□□ -2.11
CDH9Q9ULB4 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.89□□□□□ -2.11
CDH9Q9ULB4 AL137159.1-201ENST00000452808 512 ntBASIC1.89□□□□□ -2.11
CDH9Q9ULB4 AC006026.2-201ENST00000457376 180 ntBASIC1.89□□□□□ -2.11
CDH9Q9ULB4 RBBP4P6-201ENST00000508098 202 ntBASIC1.89□□□□□ -2.11
CDH9Q9ULB4 AC005178.1-201ENST00000508392 440 ntBASIC1.89□□□□□ -2.11
CDH9Q9ULB4 RNU6-1129P-201ENST00000515964 104 ntBASIC1.89□□□□□ -2.11
CDH9Q9ULB4 AC022616.3-201ENST00000523940 148 ntBASIC1.89□□□□□ -2.11
CDH9Q9ULB4 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.89□□□□□ -2.11
CDH9Q9ULB4 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.89□□□□□ -2.11
CDH9Q9ULB4 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.89□□□□□ -2.11
CDH9Q9ULB4 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.89□□□□□ -2.11
CDH9Q9ULB4 AC090897.2-201ENST00000581715 130 ntBASIC1.89□□□□□ -2.11
CDH9Q9ULB4 AC008521.1-201ENST00000587471 187 ntBASIC1.89□□□□□ -2.11
CDH9Q9ULB4 SNRPGP17-201ENST00000603780 214 ntBASIC1.89□□□□□ -2.11
CDH9Q9ULB4 AL022161.1-201ENST00000604390 213 ntBASIC1.89□□□□□ -2.11
CDH9Q9ULB4 AC025754.2-201ENST00000606491 432 ntBASIC1.89□□□□□ -2.11
CDH9Q9ULB4 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.89□□□□□ -2.11
CDH9Q9ULB4 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CDH9Q9ULB4 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.89□□□□□ -2.11
CDH9Q9ULB4 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
CDH9Q9ULB4 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.89□□□□□ -2.11
CDH9Q9ULB4 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
CDH9Q9ULB4 AC008555.8-201ENST00000623602 2168 ntBASIC1.88□□□□□ -2.11
CDH9Q9ULB4 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CDH9Q9ULB4 RNA5SP276-201ENST00000362580 94 ntBASIC1.88□□□□□ -2.11
CDH9Q9ULB4 RNU6-655P-201ENST00000362858 107 ntBASIC1.88□□□□□ -2.11
CDH9Q9ULB4 RNY1P12-201ENST00000364251 105 ntBASIC1.88□□□□□ -2.11
CDH9Q9ULB4 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CDH9Q9ULB4 RNA5SP390-201ENST00000410191 113 ntBASIC1.88□□□□□ -2.11
CDH9Q9ULB4 RNU2-23P-201ENST00000410545 195 ntBASIC1.88□□□□□ -2.11
CDH9Q9ULB4 RNA5SP111-201ENST00000411386 101 ntBASIC1.88□□□□□ -2.11
CDH9Q9ULB4 EEF1A1P40-201ENST00000412883 573 ntBASIC1.88□□□□□ -2.11
CDH9Q9ULB4 Z99497.1-201ENST00000421282 135 ntBASIC1.88□□□□□ -2.11
CDH9Q9ULB4 AC010099.3-201ENST00000423896 409 ntBASIC1.88□□□□□ -2.11
CDH9Q9ULB4 DNAJC19P4-201ENST00000440115 345 ntBASIC1.88□□□□□ -2.11
CDH9Q9ULB4 TAF9P1-201ENST00000445421 515 ntBASIC1.88□□□□□ -2.11
CDH9Q9ULB4 RPL23AP3-201ENST00000453844 468 ntBASIC1.88□□□□□ -2.11
CDH9Q9ULB4 TAF9P2-201ENST00000454958 515 ntBASIC1.88□□□□□ -2.11
CDH9Q9ULB4 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.88□□□□□ -2.11
CDH9Q9ULB4 AL121594.1-201ENST00000475906 575 ntBASIC1.88□□□□□ -2.11
CDH9Q9ULB4 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.88□□□□□ -2.11
CDH9Q9ULB4 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CDH9Q9ULB4 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.88□□□□□ -2.11
CDH9Q9ULB4 SNORA43.2-201ENST00000516652 128 ntBASIC1.88□□□□□ -2.11
CDH9Q9ULB4 RNU6-250P-201ENST00000516958 103 ntBASIC1.88□□□□□ -2.11
CDH9Q9ULB4 RNU6-667P-201ENST00000517186 102 ntBASIC1.88□□□□□ -2.11
CDH9Q9ULB4 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.88□□□□□ -2.11
CDH9Q9ULB4 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.88□□□□□ -2.11
CDH9Q9ULB4 AC009094.1-201ENST00000564443 426 ntBASIC1.88□□□□□ -2.11
CDH9Q9ULB4 AL109918.3-201ENST00000603072 338 ntBASIC1.88□□□□□ -2.11
CDH9Q9ULB4 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.88□□□□□ -2.11
CDH9Q9ULB4 AC091834.1-201ENST00000614543 472 ntBASIC1.88□□□□□ -2.11
CDH9Q9ULB4 AC090517.3-201ENST00000625170 141 ntBASIC1.88□□□□□ -2.11
CDH9Q9ULB4 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CDH9Q9ULB4 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CDH9Q9ULB4 RNU6-1210P-201ENST00000363775 107 ntBASIC1.87□□□□□ -2.11
CDH9Q9ULB4 RNU6-371P-201ENST00000364283 108 ntBASIC1.87□□□□□ -2.11
CDH9Q9ULB4 Y_RNA.598-201ENST00000410480 95 ntBASIC1.87□□□□□ -2.11
CDH9Q9ULB4 RNA5SP489-201ENST00000410986 109 ntBASIC1.87□□□□□ -2.11
CDH9Q9ULB4 RNU6-387P-201ENST00000411331 105 ntBASIC1.87□□□□□ -2.11
CDH9Q9ULB4 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CDH9Q9ULB4 AC074117.2-201ENST00000417130 397 ntBASIC1.87□□□□□ -2.11
CDH9Q9ULB4 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.87□□□□□ -2.11
CDH9Q9ULB4 PGBD4P6-201ENST00000421501 610 ntBASIC1.87□□□□□ -2.11
CDH9Q9ULB4 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.87□□□□□ -2.11
CDH9Q9ULB4 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.87□□□□□ -2.11
CDH9Q9ULB4 AL451074.3-201ENST00000437709 472 ntBASIC1.87□□□□□ -2.11
CDH9Q9ULB4 AL353689.1-201ENST00000438895 199 ntBASIC1.87□□□□□ -2.11
CDH9Q9ULB4 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.87□□□□□ -2.11
CDH9Q9ULB4 MTND6P13-201ENST00000443510 523 ntBASIC1.87□□□□□ -2.11
CDH9Q9ULB4 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.87□□□□□ -2.11
CDH9Q9ULB4 AC006512.1-201ENST00000468816 291 ntBASIC1.87□□□□□ -2.11
CDH9Q9ULB4 RPL30P6-201ENST00000475925 342 ntBASIC1.87□□□□□ -2.11
CDH9Q9ULB4 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.87□□□□□ -2.11
CDH9Q9ULB4 MRPS17P9-201ENST00000511924 393 ntBASIC1.87□□□□□ -2.11
CDH9Q9ULB4 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.87□□□□□ -2.11
CDH9Q9ULB4 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.87□□□□□ -2.11
CDH9Q9ULB4 AP000763.2-201ENST00000540641 163 ntBASIC1.87□□□□□ -2.11
CDH9Q9ULB4 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.87□□□□□ -2.11
CDH9Q9ULB4 BNIP3P6-201ENST00000549284 499 ntBASIC1.87□□□□□ -2.11
CDH9Q9ULB4 MTND1P24-201ENST00000552175 861 ntBASIC1.87□□□□□ -2.11
CDH9Q9ULB4 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.87□□□□□ -2.11
CDH9Q9ULB4 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms