Protein–RNA interactions for Protein: Q9UKV5

AMFR, E3 ubiquitin-protein ligase AMFR, humanhuman

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMFRQ9UKV5 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.22□□□□□ -1.89
AMFRQ9UKV5 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
AMFRQ9UKV5 AC108206.1-201ENST00000570186 4159 ntBASIC3.22□□□□□ -1.89
AMFRQ9UKV5 ZNF807-201ENST00000328088 1707 ntBASIC3.22□□□□□ -1.89
AMFRQ9UKV5 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
AMFRQ9UKV5 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
AMFRQ9UKV5 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
AMFRQ9UKV5 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.21□□□□□ -1.9
AMFRQ9UKV5 Y_RNA.2-201ENST00000362330 96 ntBASIC3.21□□□□□ -1.9
AMFRQ9UKV5 Y_RNA.5-201ENST00000362334 102 ntBASIC3.21□□□□□ -1.9
AMFRQ9UKV5 RNU6-778P-201ENST00000363269 103 ntBASIC3.21□□□□□ -1.9
AMFRQ9UKV5 RNU6-884P-201ENST00000363889 107 ntBASIC3.21□□□□□ -1.9
AMFRQ9UKV5 Y_RNA.202-201ENST00000364083 110 ntBASIC3.21□□□□□ -1.9
AMFRQ9UKV5 RNU6-270P-201ENST00000364131 105 ntBASIC3.21□□□□□ -1.9
AMFRQ9UKV5 SNORA22B-201ENST00000383876 138 ntBASIC3.21□□□□□ -1.9
AMFRQ9UKV5 RNU6-658P-201ENST00000384606 106 ntBASIC3.21□□□□□ -1.9
AMFRQ9UKV5 MIR7-3-201ENST00000384898 110 ntBASIC3.21□□□□□ -1.9
AMFRQ9UKV5 MIR34A-201ENST00000385130 110 ntBASIC3.21□□□□□ -1.9
AMFRQ9UKV5 SNORA75.6-201ENST00000391318 127 ntBASIC3.21□□□□□ -1.9
AMFRQ9UKV5 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.21□□□□□ -1.9
AMFRQ9UKV5 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.21□□□□□ -1.9
AMFRQ9UKV5 MTND2P23-201ENST00000422990 651 ntBASIC3.21□□□□□ -1.9
AMFRQ9UKV5 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.21□□□□□ -1.9
AMFRQ9UKV5 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.21□□□□□ -1.9
AMFRQ9UKV5 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.21□□□□□ -1.9
AMFRQ9UKV5 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.21□□□□□ -1.9
AMFRQ9UKV5 PTP4A1P4-201ENST00000512479 322 ntBASIC3.21□□□□□ -1.9
AMFRQ9UKV5 RNU6-120P-201ENST00000516077 103 ntBASIC3.21□□□□□ -1.9
AMFRQ9UKV5 SCARNA16.2-201ENST00000516520 172 ntBASIC3.21□□□□□ -1.9
AMFRQ9UKV5 Y_RNA.687-201ENST00000516558 91 ntBASIC3.21□□□□□ -1.9
AMFRQ9UKV5 MIR4782-201ENST00000577987 79 ntBASIC3.21□□□□□ -1.9
AMFRQ9UKV5 AC019176.2-201ENST00000611579 315 ntBASIC3.21□□□□□ -1.9
AMFRQ9UKV5 AL161629.2-201ENST00000615347 275 ntBASIC3.21□□□□□ -1.9
AMFRQ9UKV5 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
AMFRQ9UKV5 MTND5P30-201ENST00000452896 1731 ntBASIC3.21□□□□□ -1.9
AMFRQ9UKV5 RNU6-1115P-201ENST00000362490 106 ntBASIC3.2□□□□□ -1.9
AMFRQ9UKV5 Y_RNA.112-201ENST00000363250 102 ntBASIC3.2□□□□□ -1.9
AMFRQ9UKV5 SNORA7.4-201ENST00000384249 137 ntBASIC3.2□□□□□ -1.9
AMFRQ9UKV5 RNU6-790P-201ENST00000384479 105 ntBASIC3.2□□□□□ -1.9
AMFRQ9UKV5 MIR606-201ENST00000384851 96 ntBASIC3.2□□□□□ -1.9
AMFRQ9UKV5 SNORD67-201ENST00000390833 111 ntBASIC3.2□□□□□ -1.9
AMFRQ9UKV5 AL117339.3-201ENST00000418733 162 ntBASIC3.2□□□□□ -1.9
AMFRQ9UKV5 USMG5P1-201ENST00000425964 177 ntBASIC3.2□□□□□ -1.9
AMFRQ9UKV5 AL133396.1-201ENST00000432048 687 ntBASIC3.2□□□□□ -1.9
AMFRQ9UKV5 MTND4P19-201ENST00000446659 478 ntBASIC3.2□□□□□ -1.9
AMFRQ9UKV5 AL358232.1-201ENST00000448030 501 ntBASIC3.2□□□□□ -1.9
AMFRQ9UKV5 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.2□□□□□ -1.9
AMFRQ9UKV5 RNU6-1037P-201ENST00000459571 107 ntBASIC3.2□□□□□ -1.9
AMFRQ9UKV5 RN7SL863P-201ENST00000462370 296 ntBASIC3.2□□□□□ -1.9
AMFRQ9UKV5 AC008571.1-201ENST00000467232 300 ntBASIC3.2□□□□□ -1.9
AMFRQ9UKV5 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.2□□□□□ -1.9
AMFRQ9UKV5 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.2□□□□□ -1.9
AMFRQ9UKV5 RNU6-327P-201ENST00000516270 127 ntBASIC3.2□□□□□ -1.9
AMFRQ9UKV5 AC022634.1-201ENST00000520765 532 ntBASIC3.2□□□□□ -1.9
AMFRQ9UKV5 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.2□□□□□ -1.9
AMFRQ9UKV5 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.2□□□□□ -1.9
AMFRQ9UKV5 AC103996.1-201ENST00000555468 102 ntBASIC3.2□□□□□ -1.9
AMFRQ9UKV5 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.2□□□□□ -1.9
AMFRQ9UKV5 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.2□□□□□ -1.9
AMFRQ9UKV5 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.2□□□□□ -1.9
AMFRQ9UKV5 AC016925.2-201ENST00000605108 242 ntBASIC3.2□□□□□ -1.9
AMFRQ9UKV5 MIR3976-201ENST00000606807 139 ntBASIC3.2□□□□□ -1.9
AMFRQ9UKV5 AC011890.2-201ENST00000613393 294 ntBASIC3.2□□□□□ -1.9
AMFRQ9UKV5 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.2□□□□□ -1.9
AMFRQ9UKV5 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
AMFRQ9UKV5 AC012314.7-201ENST00000619693 93 ntBASIC3.2□□□□□ -1.9
AMFRQ9UKV5 MIR622-201ENST00000638396 96 ntBASIC3.2□□□□□ -1.9
AMFRQ9UKV5 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.2□□□□□ -1.9
AMFRQ9UKV5 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
AMFRQ9UKV5 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
AMFRQ9UKV5 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
AMFRQ9UKV5 AC022336.2-201ENST00000568966 2538 ntBASIC3.2□□□□□ -1.9
AMFRQ9UKV5 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
AMFRQ9UKV5 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
AMFRQ9UKV5 CUL1P1-201ENST00000509510 2425 ntBASIC3.19□□□□□ -1.9
AMFRQ9UKV5 RNU6-1317P-201ENST00000364582 104 ntBASIC3.19□□□□□ -1.9
AMFRQ9UKV5 SNORA33.2-201ENST00000365413 134 ntBASIC3.19□□□□□ -1.9
AMFRQ9UKV5 RNU1-73P-201ENST00000383971 164 ntBASIC3.19□□□□□ -1.9
AMFRQ9UKV5 RNU6-72P-201ENST00000384285 79 ntBASIC3.19□□□□□ -1.9
AMFRQ9UKV5 RNU6-1035P-201ENST00000384477 107 ntBASIC3.19□□□□□ -1.9
AMFRQ9UKV5 MIR183-201ENST00000384958 110 ntBASIC3.19□□□□□ -1.9
AMFRQ9UKV5 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.19□□□□□ -1.9
AMFRQ9UKV5 TRIAP1P1-201ENST00000427062 225 ntBASIC3.19□□□□□ -1.9
AMFRQ9UKV5 NIPA2P5-201ENST00000452282 464 ntBASIC3.19□□□□□ -1.9
AMFRQ9UKV5 AC109925.1-201ENST00000478069 331 ntBASIC3.19□□□□□ -1.9
AMFRQ9UKV5 AC006445.2-201ENST00000510061 472 ntBASIC3.19□□□□□ -1.9
AMFRQ9UKV5 RNU6-976P-201ENST00000516086 111 ntBASIC3.19□□□□□ -1.9
AMFRQ9UKV5 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.19□□□□□ -1.9
AMFRQ9UKV5 AMZ2P1-203ENST00000565833 850 ntBASIC3.19□□□□□ -1.9
AMFRQ9UKV5 AC109446.1-201ENST00000566172 220 ntBASIC3.19□□□□□ -1.9
AMFRQ9UKV5 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.19□□□□□ -1.9
AMFRQ9UKV5 MTCO3P13-201ENST00000577757 781 ntBASIC3.19□□□□□ -1.9
AMFRQ9UKV5 CPDP1-201ENST00000579660 283 ntBASIC3.19□□□□□ -1.9
AMFRQ9UKV5 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.19□□□□□ -1.9
AMFRQ9UKV5 AC009314.1-201ENST00000603871 304 ntBASIC3.19□□□□□ -1.9
AMFRQ9UKV5 AP000787.2-201ENST00000604432 568 ntBASIC3.19□□□□□ -1.9
AMFRQ9UKV5 AC018692.3-201ENST00000623929 123 ntBASIC3.19□□□□□ -1.9
AMFRQ9UKV5 U6.105-201ENST00000637379 88 ntBASIC3.19□□□□□ -1.9
AMFRQ9UKV5 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
AMFRQ9UKV5 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms