Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 Y_RNA.58-201ENST00000362807 102 ntBASIC2.84□□□□□ -1.95
SIX4Q9UIU6 Y_RNA.111-201ENST00000363248 100 ntBASIC2.84□□□□□ -1.95
SIX4Q9UIU6 Y_RNA.135-201ENST00000363439 95 ntBASIC2.84□□□□□ -1.95
SIX4Q9UIU6 Y_RNA.154-201ENST00000363624 102 ntBASIC2.84□□□□□ -1.95
SIX4Q9UIU6 Y_RNA.212-201ENST00000364177 102 ntBASIC2.84□□□□□ -1.95
SIX4Q9UIU6 SNORD14B-201ENST00000364533 90 ntBASIC2.84□□□□□ -1.95
SIX4Q9UIU6 RNY3P1-201ENST00000365085 102 ntBASIC2.84□□□□□ -1.95
SIX4Q9UIU6 RNY3-201ENST00000365484 102 ntBASIC2.84□□□□□ -1.95
SIX4Q9UIU6 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
SIX4Q9UIU6 Y_RNA.490-201ENST00000384413 102 ntBASIC2.84□□□□□ -1.95
SIX4Q9UIU6 Y_RNA.535-201ENST00000384612 99 ntBASIC2.84□□□□□ -1.95
SIX4Q9UIU6 SNORA40C-201ENST00000391285 128 ntBASIC2.84□□□□□ -1.95
SIX4Q9UIU6 MIR548F5-201ENST00000408421 86 ntBASIC2.84□□□□□ -1.95
SIX4Q9UIU6 RPL7P10-201ENST00000417407 739 ntBASIC2.84□□□□□ -1.95
SIX4Q9UIU6 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SIX4Q9UIU6 AC104332.2-201ENST00000429959 156 ntBASIC2.84□□□□□ -1.95
SIX4Q9UIU6 ARL5AP4-201ENST00000430731 512 ntBASIC2.84□□□□□ -1.95
SIX4Q9UIU6 UBE2V1P7-201ENST00000446395 340 ntBASIC2.84□□□□□ -1.95
SIX4Q9UIU6 RPS26P21-201ENST00000475397 348 ntBASIC2.84□□□□□ -1.95
SIX4Q9UIU6 AC011005.2-201ENST00000487324 359 ntBASIC2.84□□□□□ -1.95
SIX4Q9UIU6 HMGB1P30-201ENST00000492455 606 ntBASIC2.84□□□□□ -1.95
SIX4Q9UIU6 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.84□□□□□ -1.95
SIX4Q9UIU6 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.84□□□□□ -1.95
SIX4Q9UIU6 AC006445.2-201ENST00000510061 472 ntBASIC2.84□□□□□ -1.95
SIX4Q9UIU6 MIR892C-201ENST00000516410 77 ntBASIC2.84□□□□□ -1.95
SIX4Q9UIU6 RNU6-1332P-201ENST00000516666 104 ntBASIC2.84□□□□□ -1.95
SIX4Q9UIU6 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.84□□□□□ -1.95
SIX4Q9UIU6 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.84□□□□□ -1.95
SIX4Q9UIU6 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.84□□□□□ -1.95
SIX4Q9UIU6 COPS8P3-201ENST00000526024 482 ntBASIC2.84□□□□□ -1.95
SIX4Q9UIU6 AP005639.2-201ENST00000527592 928 ntBASIC2.84□□□□□ -1.95
SIX4Q9UIU6 AC025423.5-201ENST00000550230 219 ntBASIC2.84□□□□□ -1.95
SIX4Q9UIU6 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.84□□□□□ -1.95
SIX4Q9UIU6 AC023043.2-201ENST00000589678 1026 ntBASIC2.84□□□□□ -1.95
SIX4Q9UIU6 FTX_3.1-201ENST00000610451 147 ntBASIC2.84□□□□□ -1.95
SIX4Q9UIU6 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SIX4Q9UIU6 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.84□□□□□ -1.95
SIX4Q9UIU6 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.84□□□□□ -1.95
SIX4Q9UIU6 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.84□□□□□ -1.96
SIX4Q9UIU6 AC091564.4-201ENST00000533934 2194 ntBASIC2.84□□□□□ -1.96
SIX4Q9UIU6 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.84□□□□□ -1.96
SIX4Q9UIU6 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SIX4Q9UIU6 MIR412-201ENST00000362142 91 ntBASIC2.83□□□□□ -1.96
SIX4Q9UIU6 RNU6-799P-201ENST00000363567 107 ntBASIC2.83□□□□□ -1.96
SIX4Q9UIU6 RNU6-270P-201ENST00000364131 105 ntBASIC2.83□□□□□ -1.96
SIX4Q9UIU6 Y_RNA.324-201ENST00000365165 102 ntBASIC2.83□□□□□ -1.96
SIX4Q9UIU6 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.83□□□□□ -1.96
SIX4Q9UIU6 RNU6-166P-201ENST00000384371 107 ntBASIC2.83□□□□□ -1.96
SIX4Q9UIU6 Y_RNA.623-201ENST00000411128 95 ntBASIC2.83□□□□□ -1.96
SIX4Q9UIU6 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.83□□□□□ -1.96
SIX4Q9UIU6 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.83□□□□□ -1.96
SIX4Q9UIU6 RPL7P37-201ENST00000425095 738 ntBASIC2.83□□□□□ -1.96
SIX4Q9UIU6 AC007560.1-201ENST00000426912 237 ntBASIC2.83□□□□□ -1.96
SIX4Q9UIU6 HMGB1P9-201ENST00000429856 646 ntBASIC2.83□□□□□ -1.96
SIX4Q9UIU6 RPL32P28-201ENST00000443577 397 ntBASIC2.83□□□□□ -1.96
SIX4Q9UIU6 AC233279.1-201ENST00000455300 423 ntBASIC2.83□□□□□ -1.96
SIX4Q9UIU6 RNA5SP282-201ENST00000516355 108 ntBASIC2.83□□□□□ -1.96
SIX4Q9UIU6 RNU6-572P-201ENST00000516724 80 ntBASIC2.83□□□□□ -1.96
SIX4Q9UIU6 RNU6-566P-201ENST00000516790 107 ntBASIC2.83□□□□□ -1.96
SIX4Q9UIU6 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.83□□□□□ -1.96
SIX4Q9UIU6 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.83□□□□□ -1.96
SIX4Q9UIU6 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.83□□□□□ -1.96
SIX4Q9UIU6 MIR3162-201ENST00000581818 82 ntBASIC2.83□□□□□ -1.96
SIX4Q9UIU6 AC078899.3-201ENST00000599065 212 ntBASIC2.83□□□□□ -1.96
SIX4Q9UIU6 AC006023.1-201ENST00000603944 259 ntBASIC2.83□□□□□ -1.96
SIX4Q9UIU6 NUTF2P8-201ENST00000604593 363 ntBASIC2.83□□□□□ -1.96
SIX4Q9UIU6 APOOP1-201ENST00000604695 592 ntBASIC2.83□□□□□ -1.96
SIX4Q9UIU6 AC123912.5-201ENST00000605470 343 ntBASIC2.83□□□□□ -1.96
SIX4Q9UIU6 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.83□□□□□ -1.96
SIX4Q9UIU6 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SIX4Q9UIU6 AL138726.1-201ENST00000614873 333 ntBASIC2.83□□□□□ -1.96
SIX4Q9UIU6 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.83□□□□□ -1.96
SIX4Q9UIU6 MIR6852-201ENST00000621699 66 ntBASIC2.83□□□□□ -1.96
SIX4Q9UIU6 SCARNA15.3-201ENST00000626315 122 ntBASIC2.83□□□□□ -1.96
SIX4Q9UIU6 SCARNA4.1-201ENST00000628597 123 ntBASIC2.83□□□□□ -1.96
SIX4Q9UIU6 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.83□□□□□ -1.96
SIX4Q9UIU6 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SIX4Q9UIU6 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
SIX4Q9UIU6 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
SIX4Q9UIU6 AC006026.1-201ENST00000444025 1803 ntBASIC2.82□□□□□ -1.96
SIX4Q9UIU6 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SIX4Q9UIU6 Y_RNA.67-201ENST00000362870 100 ntBASIC2.82□□□□□ -1.96
SIX4Q9UIU6 Y_RNA.813-201ENST00000364639 102 ntBASIC2.82□□□□□ -1.96
SIX4Q9UIU6 Y_RNA.339-201ENST00000365325 102 ntBASIC2.82□□□□□ -1.96
SIX4Q9UIU6 AL031121.1-201ENST00000406553 254 ntBASIC2.82□□□□□ -1.96
SIX4Q9UIU6 MIR548K-201ENST00000408406 116 ntBASIC2.82□□□□□ -1.96
SIX4Q9UIU6 NCOR1P3-201ENST00000420479 303 ntBASIC2.82□□□□□ -1.96
SIX4Q9UIU6 AL590632.1-201ENST00000424289 371 ntBASIC2.82□□□□□ -1.96
SIX4Q9UIU6 AC098614.2-201ENST00000426040 255 ntBASIC2.82□□□□□ -1.96
SIX4Q9UIU6 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.82□□□□□ -1.96
SIX4Q9UIU6 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.82□□□□□ -1.96
SIX4Q9UIU6 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.82□□□□□ -1.96
SIX4Q9UIU6 AC008526.1-201ENST00000509149 338 ntBASIC2.82□□□□□ -1.96
SIX4Q9UIU6 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.82□□□□□ -1.96
SIX4Q9UIU6 RNA5SP454-201ENST00000517231 127 ntBASIC2.82□□□□□ -1.96
SIX4Q9UIU6 AP005597.4-201ENST00000526762 229 ntBASIC2.82□□□□□ -1.96
SIX4Q9UIU6 GLYCAM1-201ENST00000546596 285 ntBASIC2.82□□□□□ -1.96
SIX4Q9UIU6 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.82□□□□□ -1.96
SIX4Q9UIU6 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.82□□□□□ -1.96
SIX4Q9UIU6 AMZ2P1-203ENST00000565833 850 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 163.5 ms