Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 RNU2-46P-201ENST00000517038 113 ntBASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 AC011979.2-201ENST00000527568 352 ntBASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 FAM92A1P1-201ENST00000528023 890 ntBASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 AC084851.1-201ENST00000529105 249 ntBASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 RANP3-201ENST00000530970 276 ntBASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 RAB11AP2-201ENST00000545905 639 ntBASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 AC137800.2-201ENST00000574375 120 ntBASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 LRRC37A5P-203ENST00000580181 585 ntBASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 BNIP3P8-201ENST00000597863 560 ntBASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 C8orf59P2-201ENST00000603441 271 ntBASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 BNIP3P9-201ENST00000603714 553 ntBASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 AL359999.1-201ENST00000604513 294 ntBASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 AC012640.5-201ENST00000623897 319 ntBASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 AC110994.2-201ENST00000635481 492 ntBASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 MIR219B-201ENST00000637023 88 ntBASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CLIP2Q9UDT6 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.51□□□□□ -2.01
CLIP2Q9UDT6 RNY4P34-201ENST00000364779 95 ntBASIC2.51□□□□□ -2.01
CLIP2Q9UDT6 RNU6-282P-201ENST00000365357 103 ntBASIC2.51□□□□□ -2.01
CLIP2Q9UDT6 RNU6-658P-201ENST00000384606 106 ntBASIC2.51□□□□□ -2.01
CLIP2Q9UDT6 MTCO3P40-201ENST00000392516 676 ntBASIC2.51□□□□□ -2.01
CLIP2Q9UDT6 AC068050.1-201ENST00000394891 380 ntBASIC2.51□□□□□ -2.01
CLIP2Q9UDT6 Y_RNA.598-201ENST00000410480 95 ntBASIC2.51□□□□□ -2.01
CLIP2Q9UDT6 Y_RNA.608-201ENST00000410647 95 ntBASIC2.51□□□□□ -2.01
CLIP2Q9UDT6 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.51□□□□□ -2.01
CLIP2Q9UDT6 AL589872.1-201ENST00000426602 288 ntBASIC2.51□□□□□ -2.01
CLIP2Q9UDT6 ISCA1P6-201ENST00000427740 390 ntBASIC2.51□□□□□ -2.01
CLIP2Q9UDT6 AL592045.1-201ENST00000429867 352 ntBASIC2.51□□□□□ -2.01
CLIP2Q9UDT6 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.51□□□□□ -2.01
CLIP2Q9UDT6 AC009961.2-201ENST00000435771 251 ntBASIC2.51□□□□□ -2.01
CLIP2Q9UDT6 USP9YP8-201ENST00000441913 500 ntBASIC2.51□□□□□ -2.01
CLIP2Q9UDT6 MTND5P20-201ENST00000448677 143 ntBASIC2.51□□□□□ -2.01
CLIP2Q9UDT6 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.51□□□□□ -2.01
CLIP2Q9UDT6 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.51□□□□□ -2.01
CLIP2Q9UDT6 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.51□□□□□ -2.01
CLIP2Q9UDT6 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.51□□□□□ -2.01
CLIP2Q9UDT6 Y_RNA.702-201ENST00000516843 96 ntBASIC2.51□□□□□ -2.01
CLIP2Q9UDT6 SNORA20.3-201ENST00000516880 132 ntBASIC2.51□□□□□ -2.01
CLIP2Q9UDT6 RNU6-143P-201ENST00000516942 93 ntBASIC2.51□□□□□ -2.01
CLIP2Q9UDT6 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CLIP2Q9UDT6 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.51□□□□□ -2.01
CLIP2Q9UDT6 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.51□□□□□ -2.01
CLIP2Q9UDT6 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.51□□□□□ -2.01
CLIP2Q9UDT6 AL391646.1-201ENST00000603860 190 ntBASIC2.51□□□□□ -2.01
CLIP2Q9UDT6 AC104458.1-201ENST00000608243 463 ntBASIC2.51□□□□□ -2.01
CLIP2Q9UDT6 AC091304.9-201ENST00000612091 226 ntBASIC2.51□□□□□ -2.01
CLIP2Q9UDT6 AC104260.1-201ENST00000616660 539 ntBASIC2.51□□□□□ -2.01
CLIP2Q9UDT6 AC010378.1-201ENST00000619270 362 ntBASIC2.51□□□□□ -2.01
CLIP2Q9UDT6 AL359880.1-201ENST00000621879 266 ntBASIC2.51□□□□□ -2.01
CLIP2Q9UDT6 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.51□□□□□ -2.01
CLIP2Q9UDT6 AP000553.5-201ENST00000641933 54 ntBASIC2.51□□□□□ -2.01
CLIP2Q9UDT6 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
CLIP2Q9UDT6 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CLIP2Q9UDT6 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.51□□□□□ -2.01
CLIP2Q9UDT6 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.5□□□□□ -2.01
CLIP2Q9UDT6 CASC19-280ENST00000642102 1351 ntBASIC2.5□□□□□ -2.01
CLIP2Q9UDT6 ADAM3A-203ENST00000461344 2157 ntBASIC2.5□□□□□ -2.01
CLIP2Q9UDT6 SNORD114-1-201ENST00000362705 72 ntBASIC2.5□□□□□ -2.01
CLIP2Q9UDT6 Y_RNA.453-201ENST00000384223 109 ntBASIC2.5□□□□□ -2.01
CLIP2Q9UDT6 Y_RNA.534-201ENST00000384599 112 ntBASIC2.5□□□□□ -2.01
CLIP2Q9UDT6 MT-TL1-201ENST00000386347 75 ntBASIC2.5□□□□□ -2.01
CLIP2Q9UDT6 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CLIP2Q9UDT6 CIR1P3-201ENST00000405137 479 ntBASIC2.5□□□□□ -2.01
CLIP2Q9UDT6 FCF1P10-201ENST00000407590 479 ntBASIC2.5□□□□□ -2.01
CLIP2Q9UDT6 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.5□□□□□ -2.01
CLIP2Q9UDT6 AC016831.2-201ENST00000417179 352 ntBASIC2.5□□□□□ -2.01
CLIP2Q9UDT6 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.5□□□□□ -2.01
CLIP2Q9UDT6 AL353193.1-201ENST00000421444 268 ntBASIC2.5□□□□□ -2.01
CLIP2Q9UDT6 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CLIP2Q9UDT6 AL591704.1-201ENST00000432574 275 ntBASIC2.5□□□□□ -2.01
CLIP2Q9UDT6 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.5□□□□□ -2.01
CLIP2Q9UDT6 AL118520.1-201ENST00000450770 291 ntBASIC2.5□□□□□ -2.01
CLIP2Q9UDT6 RPL31P58-201ENST00000469001 379 ntBASIC2.5□□□□□ -2.01
CLIP2Q9UDT6 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.5□□□□□ -2.01
CLIP2Q9UDT6 AC090255.1-201ENST00000495779 349 ntBASIC2.5□□□□□ -2.01
CLIP2Q9UDT6 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.5□□□□□ -2.01
CLIP2Q9UDT6 SNORA31.6-201ENST00000516241 130 ntBASIC2.5□□□□□ -2.01
CLIP2Q9UDT6 RNU6-1153P-201ENST00000516760 105 ntBASIC2.5□□□□□ -2.01
CLIP2Q9UDT6 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.5□□□□□ -2.01
CLIP2Q9UDT6 MTCO2P4-201ENST00000517968 247 ntBASIC2.5□□□□□ -2.01
CLIP2Q9UDT6 OR5AQ1P-201ENST00000527596 927 ntBASIC2.5□□□□□ -2.01
CLIP2Q9UDT6 AC022878.1-201ENST00000530684 149 ntBASIC2.5□□□□□ -2.01
CLIP2Q9UDT6 RPL21P5-201ENST00000554662 472 ntBASIC2.5□□□□□ -2.01
CLIP2Q9UDT6 ZNF519P2-201ENST00000557032 169 ntBASIC2.5□□□□□ -2.01
CLIP2Q9UDT6 AC005261.5-201ENST00000596280 355 ntBASIC2.5□□□□□ -2.01
CLIP2Q9UDT6 AL117336.2-201ENST00000602435 335 ntBASIC2.5□□□□□ -2.01
CLIP2Q9UDT6 AC091152.3-201ENST00000604227 325 ntBASIC2.5□□□□□ -2.01
CLIP2Q9UDT6 AC008945.2-201ENST00000606056 604 ntBASIC2.5□□□□□ -2.01
CLIP2Q9UDT6 AP001506.1-201ENST00000615444 211 ntBASIC2.5□□□□□ -2.01
CLIP2Q9UDT6 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.5□□□□□ -2.01
CLIP2Q9UDT6 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.5□□□□□ -2.01
CLIP2Q9UDT6 AL589994.2-201ENST00000621124 579 ntBASIC2.5□□□□□ -2.01
CLIP2Q9UDT6 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.5□□□□□ -2.01
CLIP2Q9UDT6 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.5□□□□□ -2.01
CLIP2Q9UDT6 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CLIP2Q9UDT6 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.49□□□□□ -2.01
CLIP2Q9UDT6 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms