Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
USP35Q9P2H5 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.17□□□□□ -1.74
USP35Q9P2H5 RNU6-254P-201ENST00000363377 107 ntBASIC4.17□□□□□ -1.74
USP35Q9P2H5 RNU6-128P-201ENST00000383976 107 ntBASIC4.17□□□□□ -1.74
USP35Q9P2H5 SNORD67-201ENST00000390833 111 ntBASIC4.17□□□□□ -1.74
USP35Q9P2H5 AL356968.1-201ENST00000416622 474 ntBASIC4.17□□□□□ -1.74
USP35Q9P2H5 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC4.17□□□□□ -1.74
USP35Q9P2H5 AC093151.1-201ENST00000427711 313 ntBASIC4.17□□□□□ -1.74
USP35Q9P2H5 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.17□□□□□ -1.74
USP35Q9P2H5 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.17□□□□□ -1.74
USP35Q9P2H5 RNU7-66P-201ENST00000459469 62 ntBASIC4.17□□□□□ -1.74
USP35Q9P2H5 AP001324.2-201ENST00000461163 319 ntBASIC4.17□□□□□ -1.74
USP35Q9P2H5 RNU1-143P-201ENST00000516296 146 ntBASIC4.17□□□□□ -1.74
USP35Q9P2H5 SNORA31.23-201ENST00000517219 133 ntBASIC4.17□□□□□ -1.74
USP35Q9P2H5 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.17□□□□□ -1.74
USP35Q9P2H5 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.17□□□□□ -1.74
USP35Q9P2H5 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.17□□□□□ -1.74
USP35Q9P2H5 AC100830.2-201ENST00000581636 240 ntBASIC4.17□□□□□ -1.74
USP35Q9P2H5 AC019159.1-201ENST00000605094 187 ntBASIC4.17□□□□□ -1.74
USP35Q9P2H5 AL121917.1-203ENST00000605534 577 ntBASIC4.17□□□□□ -1.74
USP35Q9P2H5 U1.23-201ENST00000610293 146 ntBASIC4.17□□□□□ -1.74
USP35Q9P2H5 RNU1-68P-201ENST00000615382 146 ntBASIC4.17□□□□□ -1.74
USP35Q9P2H5 U1.39-201ENST00000621562 146 ntBASIC4.17□□□□□ -1.74
USP35Q9P2H5 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
USP35Q9P2H5 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
USP35Q9P2H5 AL162578.1-201ENST00000406202 378 ntBASIC4.16□□□□□ -1.74
USP35Q9P2H5 RNA5SP390-201ENST00000410191 113 ntBASIC4.16□□□□□ -1.74
USP35Q9P2H5 AL513477.1-202ENST00000417061 214 ntBASIC4.16□□□□□ -1.74
USP35Q9P2H5 RN7SL75P-201ENST00000461926 281 ntBASIC4.16□□□□□ -1.74
USP35Q9P2H5 RPL22P13-201ENST00000493291 347 ntBASIC4.16□□□□□ -1.74
USP35Q9P2H5 PRDX4P1-201ENST00000507189 574 ntBASIC4.16□□□□□ -1.74
USP35Q9P2H5 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC4.16□□□□□ -1.74
USP35Q9P2H5 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.16□□□□□ -1.74
USP35Q9P2H5 AC010186.2-204ENST00000537668 439 ntBASIC4.16□□□□□ -1.74
USP35Q9P2H5 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.16□□□□□ -1.74
USP35Q9P2H5 ELOCP29-201ENST00000588193 334 ntBASIC4.16□□□□□ -1.74
USP35Q9P2H5 AC004832.5-201ENST00000608677 401 ntBASIC4.16□□□□□ -1.74
USP35Q9P2H5 AC100810.6-201ENST00000638068 285 ntBASIC4.16□□□□□ -1.74
USP35Q9P2H5 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
USP35Q9P2H5 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
USP35Q9P2H5 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
USP35Q9P2H5 Y_RNA.72-201ENST00000362894 103 ntBASIC4.15□□□□□ -1.75
USP35Q9P2H5 RNU6-105P-201ENST00000363909 104 ntBASIC4.15□□□□□ -1.75
USP35Q9P2H5 Y_RNA.414-201ENST00000384011 101 ntBASIC4.15□□□□□ -1.75
USP35Q9P2H5 SNORD15B-201ENST00000384714 146 ntBASIC4.15□□□□□ -1.75
USP35Q9P2H5 RNU6-1106P-201ENST00000390845 107 ntBASIC4.15□□□□□ -1.75
USP35Q9P2H5 MIR450B-201ENST00000401182 78 ntBASIC4.15□□□□□ -1.75
USP35Q9P2H5 RNA5SP229-201ENST00000410809 99 ntBASIC4.15□□□□□ -1.75
USP35Q9P2H5 RN7SKP58-201ENST00000411010 305 ntBASIC4.15□□□□□ -1.75
USP35Q9P2H5 RNA5SP344-201ENST00000411081 104 ntBASIC4.15□□□□□ -1.75
USP35Q9P2H5 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.15□□□□□ -1.75
USP35Q9P2H5 RPL30P16-201ENST00000419341 429 ntBASIC4.15□□□□□ -1.75
USP35Q9P2H5 AL591043.1-201ENST00000432461 424 ntBASIC4.15□□□□□ -1.75
USP35Q9P2H5 AC092473.1-201ENST00000441098 221 ntBASIC4.15□□□□□ -1.75
USP35Q9P2H5 MTCO2P3-201ENST00000442543 421 ntBASIC4.15□□□□□ -1.75
USP35Q9P2H5 AC009296.1-201ENST00000443146 155 ntBASIC4.15□□□□□ -1.75
USP35Q9P2H5 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4.15□□□□□ -1.75
USP35Q9P2H5 AC018437.1-201ENST00000492214 406 ntBASIC4.15□□□□□ -1.75
USP35Q9P2H5 RPL23AP49-201ENST00000492925 468 ntBASIC4.15□□□□□ -1.75
USP35Q9P2H5 AC098799.2-201ENST00000509466 868 ntBASIC4.15□□□□□ -1.75
USP35Q9P2H5 SCARNA20.6-201ENST00000517251 106 ntBASIC4.15□□□□□ -1.75
USP35Q9P2H5 CKS1BP7-201ENST00000522230 235 ntBASIC4.15□□□□□ -1.75
USP35Q9P2H5 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC4.15□□□□□ -1.75
USP35Q9P2H5 FAM157A-202ENST00000615155 405 ntBASIC4.15□□□□□ -1.75
USP35Q9P2H5 AC244517.12-201ENST00000623581 663 ntBASIC4.15□□□□□ -1.75
USP35Q9P2H5 MIR7157-201ENST00000635801 60 ntBASIC4.15□□□□□ -1.75
USP35Q9P2H5 RBBP8P1-201ENST00000449447 1844 ntBASIC4.15□□□□□ -1.75
USP35Q9P2H5 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
USP35Q9P2H5 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.14□□□□□ -1.75
USP35Q9P2H5 RNU6-214P-201ENST00000384130 107 ntBASIC4.14□□□□□ -1.75
USP35Q9P2H5 RNU6-622P-201ENST00000384272 103 ntBASIC4.14□□□□□ -1.75
USP35Q9P2H5 RPS29P13-201ENST00000402041 169 ntBASIC4.14□□□□□ -1.75
USP35Q9P2H5 AL513185.2-201ENST00000425543 193 ntBASIC4.14□□□□□ -1.75
USP35Q9P2H5 SAR1AP4-201ENST00000429225 591 ntBASIC4.14□□□□□ -1.75
USP35Q9P2H5 AC105272.1-201ENST00000438604 198 ntBASIC4.14□□□□□ -1.75
USP35Q9P2H5 AC124916.1-201ENST00000444020 547 ntBASIC4.14□□□□□ -1.75
USP35Q9P2H5 AP001025.1-201ENST00000486139 332 ntBASIC4.14□□□□□ -1.75
USP35Q9P2H5 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.14□□□□□ -1.75
USP35Q9P2H5 RNA5SP112-201ENST00000515937 99 ntBASIC4.14□□□□□ -1.75
USP35Q9P2H5 RNA5SP217-201ENST00000515959 91 ntBASIC4.14□□□□□ -1.75
USP35Q9P2H5 AC079598.5-201ENST00000547460 117 ntBASIC4.14□□□□□ -1.75
USP35Q9P2H5 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC4.14□□□□□ -1.75
USP35Q9P2H5 MIR4435-1-201ENST00000582552 80 ntBASIC4.14□□□□□ -1.75
USP35Q9P2H5 MIR4801-201ENST00000582704 82 ntBASIC4.14□□□□□ -1.75
USP35Q9P2H5 MIR3616-201ENST00000584070 92 ntBASIC4.14□□□□□ -1.75
USP35Q9P2H5 MIR4765-201ENST00000585007 77 ntBASIC4.14□□□□□ -1.75
USP35Q9P2H5 RPS15AP11-201ENST00000594193 385 ntBASIC4.14□□□□□ -1.75
USP35Q9P2H5 CTHRC1P1-201ENST00000605383 469 ntBASIC4.14□□□□□ -1.75
USP35Q9P2H5 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
USP35Q9P2H5 AC017071.1-201ENST00000564407 2204 ntBASIC4.14□□□□□ -1.75
USP35Q9P2H5 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
USP35Q9P2H5 AC026241.1-201ENST00000517873 2142 ntBASIC4.13□□□□□ -1.75
USP35Q9P2H5 RNU6-1283P-201ENST00000365314 105 ntBASIC4.13□□□□□ -1.75
USP35Q9P2H5 BMS1P22-201ENST00000414726 313 ntBASIC4.13□□□□□ -1.75
USP35Q9P2H5 MTND1P23-201ENST00000416931 372 ntBASIC4.13□□□□□ -1.75
USP35Q9P2H5 FABP5P14-201ENST00000437273 393 ntBASIC4.13□□□□□ -1.75
USP35Q9P2H5 RPS15AP7-201ENST00000439294 405 ntBASIC4.13□□□□□ -1.75
USP35Q9P2H5 AL031274.1-201ENST00000450334 232 ntBASIC4.13□□□□□ -1.75
USP35Q9P2H5 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.13□□□□□ -1.75
USP35Q9P2H5 AP005597.4-201ENST00000526762 229 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms