Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 AC025423.5-201ENST00000550230 219 ntBASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 HMGB1P14-201ENST00000557424 591 ntBASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 CYCSP39-201ENST00000565821 309 ntBASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 MIR4790-201ENST00000577799 79 ntBASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 AC138761.3-201ENST00000579993 334 ntBASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 POLR3GP2-201ENST00000588366 668 ntBASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 AC023043.2-201ENST00000589678 1026 ntBASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 AC007938.3-201ENST00000604965 623 ntBASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 AL160281.1-201ENST00000605307 311 ntBASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
SMARCAL1Q9NZC9 Y_RNA.324-201ENST00000365165 102 ntBASIC2.84□□□□□ -1.95
SMARCAL1Q9NZC9 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
SMARCAL1Q9NZC9 SNORD116-11-201ENST00000383882 92 ntBASIC2.84□□□□□ -1.95
SMARCAL1Q9NZC9 SNORA9-201ENST00000384215 133 ntBASIC2.84□□□□□ -1.95
SMARCAL1Q9NZC9 Y_RNA.480-201ENST00000384364 102 ntBASIC2.84□□□□□ -1.95
SMARCAL1Q9NZC9 SNORA48.2-201ENST00000390926 124 ntBASIC2.84□□□□□ -1.95
SMARCAL1Q9NZC9 RNA5SP252-201ENST00000391131 119 ntBASIC2.84□□□□□ -1.95
SMARCAL1Q9NZC9 MIR548K-201ENST00000408406 116 ntBASIC2.84□□□□□ -1.95
SMARCAL1Q9NZC9 PGBD4P6-201ENST00000421501 610 ntBASIC2.84□□□□□ -1.95
SMARCAL1Q9NZC9 TMEM167AP1-201ENST00000423409 219 ntBASIC2.84□□□□□ -1.95
SMARCAL1Q9NZC9 AL590632.1-201ENST00000424289 371 ntBASIC2.84□□□□□ -1.95
SMARCAL1Q9NZC9 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.84□□□□□ -1.95
SMARCAL1Q9NZC9 AC007560.1-201ENST00000426912 237 ntBASIC2.84□□□□□ -1.95
SMARCAL1Q9NZC9 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SMARCAL1Q9NZC9 HMGB1P9-201ENST00000429856 646 ntBASIC2.84□□□□□ -1.95
SMARCAL1Q9NZC9 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.84□□□□□ -1.95
SMARCAL1Q9NZC9 CYCSP32-201ENST00000440548 321 ntBASIC2.84□□□□□ -1.95
SMARCAL1Q9NZC9 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.84□□□□□ -1.95
SMARCAL1Q9NZC9 AP000705.1-201ENST00000454567 350 ntBASIC2.84□□□□□ -1.95
SMARCAL1Q9NZC9 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.84□□□□□ -1.95
SMARCAL1Q9NZC9 AC008526.1-201ENST00000509149 338 ntBASIC2.84□□□□□ -1.95
SMARCAL1Q9NZC9 MIR892C-201ENST00000516410 77 ntBASIC2.84□□□□□ -1.95
SMARCAL1Q9NZC9 RNU6-572P-201ENST00000516724 80 ntBASIC2.84□□□□□ -1.95
SMARCAL1Q9NZC9 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.84□□□□□ -1.95
SMARCAL1Q9NZC9 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SMARCAL1Q9NZC9 MIR3200-201ENST00000580767 85 ntBASIC2.84□□□□□ -1.95
SMARCAL1Q9NZC9 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.84□□□□□ -1.95
SMARCAL1Q9NZC9 APOOP1-201ENST00000604695 592 ntBASIC2.84□□□□□ -1.95
SMARCAL1Q9NZC9 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.84□□□□□ -1.95
SMARCAL1Q9NZC9 AC016727.1-205ENST00000605437 569 ntBASIC2.84□□□□□ -1.95
SMARCAL1Q9NZC9 RNU6-85P-201ENST00000605989 107 ntBASIC2.84□□□□□ -1.95
SMARCAL1Q9NZC9 FTX_3.1-201ENST00000610451 147 ntBASIC2.84□□□□□ -1.95
SMARCAL1Q9NZC9 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SMARCAL1Q9NZC9 AL359757.2-201ENST00000624309 274 ntBASIC2.84□□□□□ -1.95
SMARCAL1Q9NZC9 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.84□□□□□ -1.95
SMARCAL1Q9NZC9 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SMARCAL1Q9NZC9 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
SMARCAL1Q9NZC9 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SMARCAL1Q9NZC9 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.83□□□□□ -1.96
SMARCAL1Q9NZC9 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.83□□□□□ -1.96
SMARCAL1Q9NZC9 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.83□□□□□ -1.96
SMARCAL1Q9NZC9 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.83□□□□□ -1.96
SMARCAL1Q9NZC9 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SMARCAL1Q9NZC9 MIR412-201ENST00000362142 91 ntBASIC2.83□□□□□ -1.96
SMARCAL1Q9NZC9 MIR26A1-201ENST00000362205 77 ntBASIC2.83□□□□□ -1.96
SMARCAL1Q9NZC9 RNA5SP139-201ENST00000364340 117 ntBASIC2.83□□□□□ -1.96
SMARCAL1Q9NZC9 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SMARCAL1Q9NZC9 Y_RNA.419-201ENST00000384041 102 ntBASIC2.83□□□□□ -1.96
SMARCAL1Q9NZC9 RNU6-166P-201ENST00000384371 107 ntBASIC2.83□□□□□ -1.96
SMARCAL1Q9NZC9 SNORD73A-201ENST00000386062 65 ntBASIC2.83□□□□□ -1.96
SMARCAL1Q9NZC9 SNORA40C-201ENST00000391285 128 ntBASIC2.83□□□□□ -1.96
SMARCAL1Q9NZC9 Y_RNA.623-201ENST00000411128 95 ntBASIC2.83□□□□□ -1.96
SMARCAL1Q9NZC9 RNU6-1304P-201ENST00000411374 106 ntBASIC2.83□□□□□ -1.96
SMARCAL1Q9NZC9 HMGN2P30-201ENST00000423237 256 ntBASIC2.83□□□□□ -1.96
SMARCAL1Q9NZC9 RPL7P37-201ENST00000425095 738 ntBASIC2.83□□□□□ -1.96
SMARCAL1Q9NZC9 MTND1P14-201ENST00000427400 950 ntBASIC2.83□□□□□ -1.96
SMARCAL1Q9NZC9 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.83□□□□□ -1.96
SMARCAL1Q9NZC9 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.83□□□□□ -1.96
SMARCAL1Q9NZC9 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.83□□□□□ -1.96
SMARCAL1Q9NZC9 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.83□□□□□ -1.96
SMARCAL1Q9NZC9 UBBP3-201ENST00000445497 241 ntBASIC2.83□□□□□ -1.96
SMARCAL1Q9NZC9 Y_RNA.632-201ENST00000459189 102 ntBASIC2.83□□□□□ -1.96
SMARCAL1Q9NZC9 AC011005.2-201ENST00000487324 359 ntBASIC2.83□□□□□ -1.96
SMARCAL1Q9NZC9 HMGB1P30-201ENST00000492455 606 ntBASIC2.83□□□□□ -1.96
SMARCAL1Q9NZC9 MTCO1P29-201ENST00000496868 288 ntBASIC2.83□□□□□ -1.96
SMARCAL1Q9NZC9 RPS27P27-201ENST00000498779 255 ntBASIC2.83□□□□□ -1.96
SMARCAL1Q9NZC9 AC006445.2-201ENST00000510061 472 ntBASIC2.83□□□□□ -1.96
SMARCAL1Q9NZC9 RN7SKP24-201ENST00000515888 284 ntBASIC2.83□□□□□ -1.96
SMARCAL1Q9NZC9 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.83□□□□□ -1.96
SMARCAL1Q9NZC9 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.83□□□□□ -1.96
SMARCAL1Q9NZC9 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.83□□□□□ -1.96
SMARCAL1Q9NZC9 AC113139.1-201ENST00000605049 239 ntBASIC2.83□□□□□ -1.96
SMARCAL1Q9NZC9 AC123912.5-201ENST00000605470 343 ntBASIC2.83□□□□□ -1.96
SMARCAL1Q9NZC9 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.83□□□□□ -1.96
SMARCAL1Q9NZC9 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.83□□□□□ -1.96
SMARCAL1Q9NZC9 ZNF519P1-201ENST00000449011 1626 ntBASIC2.82□□□□□ -1.96
SMARCAL1Q9NZC9 AL359693.1-201ENST00000614959 2407 ntBASIC2.82□□□□□ -1.96
SMARCAL1Q9NZC9 AC096644.4-201ENST00000563417 2912 ntBASIC2.82□□□□□ -1.96
SMARCAL1Q9NZC9 RNU6-562P-201ENST00000362731 107 ntBASIC2.82□□□□□ -1.96
SMARCAL1Q9NZC9 Y_RNA.135-201ENST00000363439 95 ntBASIC2.82□□□□□ -1.96
SMARCAL1Q9NZC9 RNU6-270P-201ENST00000364131 105 ntBASIC2.82□□□□□ -1.96
SMARCAL1Q9NZC9 SNORD14B-201ENST00000364533 90 ntBASIC2.82□□□□□ -1.96
SMARCAL1Q9NZC9 SNORA44-201ENST00000384584 132 ntBASIC2.82□□□□□ -1.96
SMARCAL1Q9NZC9 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.82□□□□□ -1.96
SMARCAL1Q9NZC9 NCOR1P3-201ENST00000420479 303 ntBASIC2.82□□□□□ -1.96
SMARCAL1Q9NZC9 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.82□□□□□ -1.96
SMARCAL1Q9NZC9 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.82□□□□□ -1.96
SMARCAL1Q9NZC9 RPS3AP52-201ENST00000435639 297 ntBASIC2.82□□□□□ -1.96
SMARCAL1Q9NZC9 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms