Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
MKS1Q9NXB0 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
MKS1Q9NXB0 MIR369-201ENST00000362155 70 ntBASIC3.43□□□□□ -1.86
MKS1Q9NXB0 XGY1-201ENST00000381172 446 ntBASIC3.43□□□□□ -1.86
MKS1Q9NXB0 RNU6-1227P-201ENST00000383981 107 ntBASIC3.43□□□□□ -1.86
MKS1Q9NXB0 RNU6-1027P-201ENST00000383998 107 ntBASIC3.43□□□□□ -1.86
MKS1Q9NXB0 SNORA41-201ENST00000384675 132 ntBASIC3.43□□□□□ -1.86
MKS1Q9NXB0 MIR544A-201ENST00000384855 91 ntBASIC3.43□□□□□ -1.86
MKS1Q9NXB0 MIR1302-11-201ENST00000408051 138 ntBASIC3.43□□□□□ -1.86
MKS1Q9NXB0 MIR1302-9-201ENST00000408365 138 ntBASIC3.43□□□□□ -1.86
MKS1Q9NXB0 MIR1302-10-201ENST00000408734 138 ntBASIC3.43□□□□□ -1.86
MKS1Q9NXB0 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.43□□□□□ -1.86
MKS1Q9NXB0 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.43□□□□□ -1.86
MKS1Q9NXB0 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.43□□□□□ -1.86
MKS1Q9NXB0 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.43□□□□□ -1.86
MKS1Q9NXB0 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.43□□□□□ -1.86
MKS1Q9NXB0 AC004975.1-201ENST00000428733 208 ntBASIC3.43□□□□□ -1.86
MKS1Q9NXB0 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.43□□□□□ -1.86
MKS1Q9NXB0 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.43□□□□□ -1.86
MKS1Q9NXB0 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.43□□□□□ -1.86
MKS1Q9NXB0 RAC1P5-201ENST00000512182 576 ntBASIC3.43□□□□□ -1.86
MKS1Q9NXB0 RN7SKP21-201ENST00000516503 220 ntBASIC3.43□□□□□ -1.86
MKS1Q9NXB0 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.43□□□□□ -1.86
MKS1Q9NXB0 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.43□□□□□ -1.86
MKS1Q9NXB0 AL353621.2-201ENST00000605340 133 ntBASIC3.43□□□□□ -1.86
MKS1Q9NXB0 MIR1302-2-201ENST00000607096 138 ntBASIC3.43□□□□□ -1.86
MKS1Q9NXB0 ZYXP1-201ENST00000617638 118 ntBASIC3.43□□□□□ -1.86
MKS1Q9NXB0 CR392039.5-201ENST00000623201 510 ntBASIC3.43□□□□□ -1.86
MKS1Q9NXB0 AC002064.3-201ENST00000623448 346 ntBASIC3.43□□□□□ -1.86
MKS1Q9NXB0 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
MKS1Q9NXB0 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.43□□□□□ -1.86
MKS1Q9NXB0 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.43□□□□□ -1.86
MKS1Q9NXB0 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
MKS1Q9NXB0 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.43□□□□□ -1.86
MKS1Q9NXB0 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
MKS1Q9NXB0 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
MKS1Q9NXB0 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
MKS1Q9NXB0 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
MKS1Q9NXB0 SNORD50.1-201ENST00000362987 71 ntBASIC3.42□□□□□ -1.86
MKS1Q9NXB0 SNORD56.3-201ENST00000363507 71 ntBASIC3.42□□□□□ -1.86
MKS1Q9NXB0 Y_RNA.197-201ENST00000364004 102 ntBASIC3.42□□□□□ -1.86
MKS1Q9NXB0 SNORD32A-201ENST00000364805 84 ntBASIC3.42□□□□□ -1.86
MKS1Q9NXB0 RNU6-1040P-201ENST00000383974 107 ntBASIC3.42□□□□□ -1.86
MKS1Q9NXB0 RNU6-784P-201ENST00000384330 106 ntBASIC3.42□□□□□ -1.86
MKS1Q9NXB0 AL133475.1-201ENST00000404414 305 ntBASIC3.42□□□□□ -1.86
MKS1Q9NXB0 RN7SKP111-201ENST00000410349 271 ntBASIC3.42□□□□□ -1.86
MKS1Q9NXB0 RNA5SP44-201ENST00000410446 133 ntBASIC3.42□□□□□ -1.86
MKS1Q9NXB0 ATP5A1P2-201ENST00000412323 255 ntBASIC3.42□□□□□ -1.86
MKS1Q9NXB0 AL356968.1-201ENST00000416622 474 ntBASIC3.42□□□□□ -1.86
MKS1Q9NXB0 AC104332.2-201ENST00000429959 156 ntBASIC3.42□□□□□ -1.86
MKS1Q9NXB0 AC005534.2-201ENST00000431047 433 ntBASIC3.42□□□□□ -1.86
MKS1Q9NXB0 HMGN2P31-201ENST00000432430 273 ntBASIC3.42□□□□□ -1.86
MKS1Q9NXB0 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.42□□□□□ -1.86
MKS1Q9NXB0 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.42□□□□□ -1.86
MKS1Q9NXB0 OSTCP8-201ENST00000445117 448 ntBASIC3.42□□□□□ -1.86
MKS1Q9NXB0 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.42□□□□□ -1.86
MKS1Q9NXB0 RPS26P21-201ENST00000475397 348 ntBASIC3.42□□□□□ -1.86
MKS1Q9NXB0 SNORA64.4-201ENST00000516632 81 ntBASIC3.42□□□□□ -1.86
MKS1Q9NXB0 SCARNA20.6-201ENST00000517251 106 ntBASIC3.42□□□□□ -1.86
MKS1Q9NXB0 AC068657.1-201ENST00000520807 306 ntBASIC3.42□□□□□ -1.86
MKS1Q9NXB0 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.42□□□□□ -1.86
MKS1Q9NXB0 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.42□□□□□ -1.86
MKS1Q9NXB0 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.42□□□□□ -1.86
MKS1Q9NXB0 AL356157.2-201ENST00000605122 111 ntBASIC3.42□□□□□ -1.86
MKS1Q9NXB0 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
MKS1Q9NXB0 UCA1.1-201ENST00000620952 75 ntBASIC3.42□□□□□ -1.86
MKS1Q9NXB0 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
MKS1Q9NXB0 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
MKS1Q9NXB0 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.41□□□□□ -1.86
MKS1Q9NXB0 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.41□□□□□ -1.86
MKS1Q9NXB0 MTND5P9-201ENST00000503854 1755 ntBASIC3.41□□□□□ -1.86
MKS1Q9NXB0 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
MKS1Q9NXB0 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
MKS1Q9NXB0 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.41□□□□□ -1.86
MKS1Q9NXB0 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
MKS1Q9NXB0 SNORD9-201ENST00000362566 104 ntBASIC3.41□□□□□ -1.86
MKS1Q9NXB0 Y_RNA.48-201ENST00000362710 103 ntBASIC3.41□□□□□ -1.86
MKS1Q9NXB0 Y_RNA.123-201ENST00000363338 102 ntBASIC3.41□□□□□ -1.86
MKS1Q9NXB0 Y_RNA.395-201ENST00000383945 109 ntBASIC3.41□□□□□ -1.86
MKS1Q9NXB0 RPL23AP95-201ENST00000426806 265 ntBASIC3.41□□□□□ -1.86
MKS1Q9NXB0 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.41□□□□□ -1.86
MKS1Q9NXB0 RPL23AP50-201ENST00000434149 455 ntBASIC3.41□□□□□ -1.86
MKS1Q9NXB0 OR4C10P-201ENST00000434991 931 ntBASIC3.41□□□□□ -1.86
MKS1Q9NXB0 AC011816.1-201ENST00000441346 546 ntBASIC3.41□□□□□ -1.86
MKS1Q9NXB0 MTCYBP6-201ENST00000441810 138 ntBASIC3.41□□□□□ -1.86
MKS1Q9NXB0 MIR2053-201ENST00000459295 91 ntBASIC3.41□□□□□ -1.86
MKS1Q9NXB0 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.41□□□□□ -1.86
MKS1Q9NXB0 RNU6-470P-201ENST00000515954 104 ntBASIC3.41□□□□□ -1.86
MKS1Q9NXB0 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.41□□□□□ -1.86
MKS1Q9NXB0 CBX3P8-201ENST00000532412 525 ntBASIC3.41□□□□□ -1.86
MKS1Q9NXB0 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.41□□□□□ -1.86
MKS1Q9NXB0 AC007224.1-201ENST00000564410 144 ntBASIC3.41□□□□□ -1.86
MKS1Q9NXB0 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.41□□□□□ -1.86
MKS1Q9NXB0 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.41□□□□□ -1.86
MKS1Q9NXB0 MIR5696-201ENST00000578474 85 ntBASIC3.41□□□□□ -1.86
MKS1Q9NXB0 RN7SL703P-201ENST00000578485 302 ntBASIC3.41□□□□□ -1.86
MKS1Q9NXB0 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.41□□□□□ -1.86
MKS1Q9NXB0 AC009318.2-201ENST00000610917 651 ntBASIC3.41□□□□□ -1.86
MKS1Q9NXB0 uc_338.14-201ENST00000613162 166 ntBASIC3.41□□□□□ -1.86
MKS1Q9NXB0 AC134503.1-201ENST00000633048 54 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms