Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCM2LQ9NUG4 AC008669.1-201ENST00000565823 2178 ntBASIC3.47□□□□□ -1.85
CCM2LQ9NUG4 MIR30E-201ENST00000362104 92 ntBASIC3.47□□□□□ -1.85
CCM2LQ9NUG4 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
CCM2LQ9NUG4 AP002088.1-201ENST00000382740 395 ntBASIC3.47□□□□□ -1.85
CCM2LQ9NUG4 AC243428.1-201ENST00000421099 264 ntBASIC3.47□□□□□ -1.85
CCM2LQ9NUG4 AL365496.1-201ENST00000426885 215 ntBASIC3.47□□□□□ -1.85
CCM2LQ9NUG4 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.47□□□□□ -1.85
CCM2LQ9NUG4 AC243964.1-201ENST00000441814 261 ntBASIC3.47□□□□□ -1.85
CCM2LQ9NUG4 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.47□□□□□ -1.85
CCM2LQ9NUG4 AC068781.1-201ENST00000488231 618 ntBASIC3.47□□□□□ -1.85
CCM2LQ9NUG4 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.47□□□□□ -1.85
CCM2LQ9NUG4 AC097462.2-201ENST00000504623 481 ntBASIC3.47□□□□□ -1.85
CCM2LQ9NUG4 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.47□□□□□ -1.85
CCM2LQ9NUG4 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.47□□□□□ -1.85
CCM2LQ9NUG4 RNA5SP164-201ENST00000516533 110 ntBASIC3.47□□□□□ -1.85
CCM2LQ9NUG4 CKS1BP7-201ENST00000522230 235 ntBASIC3.47□□□□□ -1.85
CCM2LQ9NUG4 CBX3P8-201ENST00000532412 525 ntBASIC3.47□□□□□ -1.85
CCM2LQ9NUG4 CYCSP30-201ENST00000546447 172 ntBASIC3.47□□□□□ -1.85
CCM2LQ9NUG4 AL356157.2-201ENST00000605122 111 ntBASIC3.47□□□□□ -1.85
CCM2LQ9NUG4 AC009318.2-201ENST00000610917 651 ntBASIC3.47□□□□□ -1.85
CCM2LQ9NUG4 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.47□□□□□ -1.85
CCM2LQ9NUG4 MIR7153-201ENST00000637758 57 ntBASIC3.47□□□□□ -1.85
CCM2LQ9NUG4 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCM2LQ9NUG4 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CCM2LQ9NUG4 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CCM2LQ9NUG4 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.47□□□□□ -1.85
CCM2LQ9NUG4 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.46□□□□□ -1.85
CCM2LQ9NUG4 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.46□□□□□ -1.85
CCM2LQ9NUG4 Y_RNA.123-201ENST00000363338 102 ntBASIC3.46□□□□□ -1.86
CCM2LQ9NUG4 Y_RNA.252-201ENST00000364556 101 ntBASIC3.46□□□□□ -1.86
CCM2LQ9NUG4 RNU1-140P-201ENST00000365040 165 ntBASIC3.46□□□□□ -1.86
CCM2LQ9NUG4 RNU6-784P-201ENST00000384330 106 ntBASIC3.46□□□□□ -1.86
CCM2LQ9NUG4 RNU6-692P-201ENST00000384496 107 ntBASIC3.46□□□□□ -1.86
CCM2LQ9NUG4 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CCM2LQ9NUG4 RPS29P4-201ENST00000414733 161 ntBASIC3.46□□□□□ -1.86
CCM2LQ9NUG4 AC007969.2-201ENST00000441891 191 ntBASIC3.46□□□□□ -1.86
CCM2LQ9NUG4 AL035666.1-201ENST00000446195 348 ntBASIC3.46□□□□□ -1.86
CCM2LQ9NUG4 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.46□□□□□ -1.86
CCM2LQ9NUG4 AL163540.1-201ENST00000485382 386 ntBASIC3.46□□□□□ -1.86
CCM2LQ9NUG4 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.46□□□□□ -1.86
CCM2LQ9NUG4 RPL17P19-201ENST00000489069 552 ntBASIC3.46□□□□□ -1.86
CCM2LQ9NUG4 AC022447.4-201ENST00000504053 364 ntBASIC3.46□□□□□ -1.86
CCM2LQ9NUG4 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.46□□□□□ -1.86
CCM2LQ9NUG4 SNORA31.23-201ENST00000517219 133 ntBASIC3.46□□□□□ -1.86
CCM2LQ9NUG4 RNU6-988P-201ENST00000519081 107 ntBASIC3.46□□□□□ -1.86
CCM2LQ9NUG4 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.46□□□□□ -1.86
CCM2LQ9NUG4 SUB1P3-201ENST00000564581 315 ntBASIC3.46□□□□□ -1.86
CCM2LQ9NUG4 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.46□□□□□ -1.86
CCM2LQ9NUG4 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.46□□□□□ -1.86
CCM2LQ9NUG4 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.46□□□□□ -1.86
CCM2LQ9NUG4 MTND5P30-201ENST00000452896 1731 ntBASIC3.46□□□□□ -1.86
CCM2LQ9NUG4 MTND5P1-201ENST00000445440 1375 ntBASIC3.46□□□□□ -1.86
CCM2LQ9NUG4 AC009541.1-201ENST00000438279 2662 ntBASIC3.46□□□□□ -1.86
CCM2LQ9NUG4 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
CCM2LQ9NUG4 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.45□□□□□ -1.86
CCM2LQ9NUG4 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.45□□□□□ -1.86
CCM2LQ9NUG4 AC068647.1-201ENST00000489539 2265 ntBASIC3.45□□□□□ -1.86
CCM2LQ9NUG4 RBBP8P1-201ENST00000449447 1844 ntBASIC3.45□□□□□ -1.86
CCM2LQ9NUG4 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.45□□□□□ -1.86
CCM2LQ9NUG4 Y_RNA.132-201ENST00000363421 102 ntBASIC3.45□□□□□ -1.86
CCM2LQ9NUG4 Y_RNA.428-201ENST00000384078 102 ntBASIC3.45□□□□□ -1.86
CCM2LQ9NUG4 Y_RNA.533-201ENST00000384596 114 ntBASIC3.45□□□□□ -1.86
CCM2LQ9NUG4 U8.11-201ENST00000384699 133 ntBASIC3.45□□□□□ -1.86
CCM2LQ9NUG4 U8.12-201ENST00000384701 133 ntBASIC3.45□□□□□ -1.86
CCM2LQ9NUG4 MIR147B-201ENST00000390185 80 ntBASIC3.45□□□□□ -1.86
CCM2LQ9NUG4 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CCM2LQ9NUG4 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.45□□□□□ -1.86
CCM2LQ9NUG4 PMCHL1-202ENST00000423102 261 ntBASIC3.45□□□□□ -1.86
CCM2LQ9NUG4 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.45□□□□□ -1.86
CCM2LQ9NUG4 AL353997.1-201ENST00000432936 108 ntBASIC3.45□□□□□ -1.86
CCM2LQ9NUG4 BX679664.1-201ENST00000434429 253 ntBASIC3.45□□□□□ -1.86
CCM2LQ9NUG4 AC099799.1-201ENST00000439809 192 ntBASIC3.45□□□□□ -1.86
CCM2LQ9NUG4 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.45□□□□□ -1.86
CCM2LQ9NUG4 U8.18-201ENST00000459285 133 ntBASIC3.45□□□□□ -1.86
CCM2LQ9NUG4 RPS4XP22-201ENST00000480755 780 ntBASIC3.45□□□□□ -1.86
CCM2LQ9NUG4 AC096576.1-201ENST00000489014 359 ntBASIC3.45□□□□□ -1.86
CCM2LQ9NUG4 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.45□□□□□ -1.86
CCM2LQ9NUG4 RN7SKP295-201ENST00000517264 153 ntBASIC3.45□□□□□ -1.86
CCM2LQ9NUG4 AC009812.2-201ENST00000517657 457 ntBASIC3.45□□□□□ -1.86
CCM2LQ9NUG4 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.45□□□□□ -1.86
CCM2LQ9NUG4 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.45□□□□□ -1.86
CCM2LQ9NUG4 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.45□□□□□ -1.86
CCM2LQ9NUG4 MIR5696-201ENST00000578474 85 ntBASIC3.45□□□□□ -1.86
CCM2LQ9NUG4 MIR5195-201ENST00000583555 115 ntBASIC3.45□□□□□ -1.86
CCM2LQ9NUG4 AC005014.2-201ENST00000607795 599 ntBASIC3.45□□□□□ -1.86
CCM2LQ9NUG4 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.45□□□□□ -1.86
CCM2LQ9NUG4 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.45□□□□□ -1.86
CCM2LQ9NUG4 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.45□□□□□ -1.86
CCM2LQ9NUG4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CCM2LQ9NUG4 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.44□□□□□ -1.86
CCM2LQ9NUG4 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCM2LQ9NUG4 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.44□□□□□ -1.86
CCM2LQ9NUG4 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CCM2LQ9NUG4 RNU1-75P-201ENST00000347264 129 ntBASIC3.44□□□□□ -1.86
CCM2LQ9NUG4 Y_RNA.5-201ENST00000362334 102 ntBASIC3.44□□□□□ -1.86
CCM2LQ9NUG4 Y_RNA.28-201ENST00000362554 111 ntBASIC3.44□□□□□ -1.86
CCM2LQ9NUG4 SNORD50.1-201ENST00000362987 71 ntBASIC3.44□□□□□ -1.86
CCM2LQ9NUG4 RNY1P16-201ENST00000363063 111 ntBASIC3.44□□□□□ -1.86
CCM2LQ9NUG4 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms