Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 AC008752.3-201ENST00000588113 712 ntBASIC2.19□□□□□ -2.06
ZCCHC3Q9NUD5 AC078795.2-201ENST00000602835 1252 ntBASIC2.19□□□□□ -2.06
ZCCHC3Q9NUD5 RN7SKP299-201ENST00000606679 301 ntBASIC2.19□□□□□ -2.06
ZCCHC3Q9NUD5 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
ZCCHC3Q9NUD5 U4.7-201ENST00000638126 106 ntBASIC2.19□□□□□ -2.06
ZCCHC3Q9NUD5 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
ZCCHC3Q9NUD5 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
ZCCHC3Q9NUD5 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.19□□□□□ -2.06
ZCCHC3Q9NUD5 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
ZCCHC3Q9NUD5 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
ZCCHC3Q9NUD5 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
ZCCHC3Q9NUD5 RNU6-655P-201ENST00000362858 107 ntBASIC2.18□□□□□ -2.06
ZCCHC3Q9NUD5 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.18□□□□□ -2.06
ZCCHC3Q9NUD5 SNORA6-201ENST00000384033 151 ntBASIC2.18□□□□□ -2.06
ZCCHC3Q9NUD5 RNU5A-6P-201ENST00000384136 116 ntBASIC2.18□□□□□ -2.06
ZCCHC3Q9NUD5 RNU6-434P-201ENST00000384376 107 ntBASIC2.18□□□□□ -2.06
ZCCHC3Q9NUD5 MIR561-201ENST00000385216 97 ntBASIC2.18□□□□□ -2.06
ZCCHC3Q9NUD5 SNORA16.2-201ENST00000390991 127 ntBASIC2.18□□□□□ -2.06
ZCCHC3Q9NUD5 SNORD70.1-201ENST00000391007 85 ntBASIC2.18□□□□□ -2.06
ZCCHC3Q9NUD5 RNU6-903P-201ENST00000391270 109 ntBASIC2.18□□□□□ -2.06
ZCCHC3Q9NUD5 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.18□□□□□ -2.06
ZCCHC3Q9NUD5 BTF3L4P1-201ENST00000413813 468 ntBASIC2.18□□□□□ -2.06
ZCCHC3Q9NUD5 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.18□□□□□ -2.06
ZCCHC3Q9NUD5 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.18□□□□□ -2.06
ZCCHC3Q9NUD5 AIMP1P2-201ENST00000425294 312 ntBASIC2.18□□□□□ -2.06
ZCCHC3Q9NUD5 RPS15AP28-201ENST00000435088 386 ntBASIC2.18□□□□□ -2.06
ZCCHC3Q9NUD5 CR769767.1-201ENST00000436337 346 ntBASIC2.18□□□□□ -2.06
ZCCHC3Q9NUD5 IPO7P1-201ENST00000442031 636 ntBASIC2.18□□□□□ -2.06
ZCCHC3Q9NUD5 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.18□□□□□ -2.06
ZCCHC3Q9NUD5 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.18□□□□□ -2.06
ZCCHC3Q9NUD5 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.18□□□□□ -2.06
ZCCHC3Q9NUD5 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.18□□□□□ -2.06
ZCCHC3Q9NUD5 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.18□□□□□ -2.06
ZCCHC3Q9NUD5 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.18□□□□□ -2.06
ZCCHC3Q9NUD5 MIR5694-201ENST00000581190 76 ntBASIC2.18□□□□□ -2.06
ZCCHC3Q9NUD5 AC046143.2-201ENST00000609789 160 ntBASIC2.18□□□□□ -2.06
ZCCHC3Q9NUD5 AC104237.2-201ENST00000612456 443 ntBASIC2.18□□□□□ -2.06
ZCCHC3Q9NUD5 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.18□□□□□ -2.06
ZCCHC3Q9NUD5 AC007792.1-201ENST00000623023 402 ntBASIC2.18□□□□□ -2.06
ZCCHC3Q9NUD5 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.18□□□□□ -2.06
ZCCHC3Q9NUD5 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.18□□□□□ -2.06
ZCCHC3Q9NUD5 RNU6-1210P-201ENST00000363775 107 ntBASIC2.17□□□□□ -2.06
ZCCHC3Q9NUD5 Y_RNA.359-201ENST00000365498 102 ntBASIC2.17□□□□□ -2.06
ZCCHC3Q9NUD5 SNORD116-1-201ENST00000384335 95 ntBASIC2.17□□□□□ -2.06
ZCCHC3Q9NUD5 DEFB108C-201ENST00000400154 252 ntBASIC2.17□□□□□ -2.06
ZCCHC3Q9NUD5 AL591034.2-201ENST00000402839 359 ntBASIC2.17□□□□□ -2.06
ZCCHC3Q9NUD5 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
ZCCHC3Q9NUD5 AC073464.1-201ENST00000429823 534 ntBASIC2.17□□□□□ -2.06
ZCCHC3Q9NUD5 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.17□□□□□ -2.06
ZCCHC3Q9NUD5 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.17□□□□□ -2.06
ZCCHC3Q9NUD5 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.17□□□□□ -2.06
ZCCHC3Q9NUD5 AC007969.2-201ENST00000441891 191 ntBASIC2.17□□□□□ -2.06
ZCCHC3Q9NUD5 PRPS1P1-201ENST00000445305 876 ntBASIC2.17□□□□□ -2.06
ZCCHC3Q9NUD5 RPS3AP17-201ENST00000472594 777 ntBASIC2.17□□□□□ -2.06
ZCCHC3Q9NUD5 AC018868.1-201ENST00000491307 315 ntBASIC2.17□□□□□ -2.06
ZCCHC3Q9NUD5 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.17□□□□□ -2.06
ZCCHC3Q9NUD5 RN7SL636P-201ENST00000497504 294 ntBASIC2.17□□□□□ -2.06
ZCCHC3Q9NUD5 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.17□□□□□ -2.06
ZCCHC3Q9NUD5 HMGB1P29-201ENST00000505659 499 ntBASIC2.17□□□□□ -2.06
ZCCHC3Q9NUD5 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
ZCCHC3Q9NUD5 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.17□□□□□ -2.06
ZCCHC3Q9NUD5 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.17□□□□□ -2.06
ZCCHC3Q9NUD5 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.17□□□□□ -2.06
ZCCHC3Q9NUD5 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.17□□□□□ -2.06
ZCCHC3Q9NUD5 RPS3AP23-202ENST00000574601 686 ntBASIC2.17□□□□□ -2.06
ZCCHC3Q9NUD5 AP005136.1-201ENST00000579765 429 ntBASIC2.17□□□□□ -2.06
ZCCHC3Q9NUD5 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.17□□□□□ -2.06
ZCCHC3Q9NUD5 AL391646.1-201ENST00000603860 190 ntBASIC2.17□□□□□ -2.06
ZCCHC3Q9NUD5 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
ZCCHC3Q9NUD5 MIR6840-201ENST00000611937 71 ntBASIC2.17□□□□□ -2.06
ZCCHC3Q9NUD5 AL159153.1-201ENST00000619688 317 ntBASIC2.17□□□□□ -2.06
ZCCHC3Q9NUD5 AC012640.5-201ENST00000623897 319 ntBASIC2.17□□□□□ -2.06
ZCCHC3Q9NUD5 AC002543.1-201ENST00000299783 1954 ntBASIC2.17□□□□□ -2.06
ZCCHC3Q9NUD5 AL136360.1-201ENST00000503377 1900 ntBASIC2.17□□□□□ -2.06
ZCCHC3Q9NUD5 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 RNU6-37P-201ENST00000362692 107 ntBASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 RNU6-552P-201ENST00000362869 119 ntBASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 RNU1-23P-201ENST00000363361 144 ntBASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 RNU6-11P-201ENST00000364234 107 ntBASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 RNU1-91P-201ENST00000364746 163 ntBASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 RNU6-25P-201ENST00000383873 107 ntBASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 RNU6-1-201ENST00000383898 107 ntBASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 RNU6-48P-201ENST00000384161 107 ntBASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 RNU6-36P-201ENST00000384172 107 ntBASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 RNU6-4P-201ENST00000384205 107 ntBASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 RNU6-5P-201ENST00000384238 107 ntBASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 RNU6-3P-201ENST00000384314 107 ntBASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 Y_RNA.480-201ENST00000384364 102 ntBASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 RNU6-16P-201ENST00000384385 107 ntBASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 RNU6-15P-201ENST00000384534 107 ntBASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 RNU6-2-201ENST00000384627 107 ntBASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 RNU6-29P-201ENST00000384637 107 ntBASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 RNU6-9-201ENST00000384776 107 ntBASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 RNU6-33P-201ENST00000384793 107 ntBASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 CBX3P9-201ENST00000402326 552 ntBASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 GSTA9P-201ENST00000406231 611 ntBASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 SNORD23.1-201ENST00000408212 104 ntBASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.16□□□□□ -2.06
ZCCHC3Q9NUD5 MORF4L1P6-201ENST00000418771 268 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms