Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 RPL31P58-201ENST00000469001 379 ntBASIC1.03□□□□□ -2.24
CISHQ9NSE2 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.03□□□□□ -2.24
CISHQ9NSE2 AC025465.3-201ENST00000510570 311 ntBASIC1.03□□□□□ -2.24
CISHQ9NSE2 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.03□□□□□ -2.24
CISHQ9NSE2 TRAV32-201ENST00000553993 340 ntBASIC1.03□□□□□ -2.24
CISHQ9NSE2 AL157871.3-201ENST00000557231 293 ntBASIC1.03□□□□□ -2.24
CISHQ9NSE2 AC123912.5-201ENST00000605470 343 ntBASIC1.03□□□□□ -2.24
CISHQ9NSE2 AC112220.2-201ENST00000605513 533 ntBASIC1.03□□□□□ -2.24
CISHQ9NSE2 AC006270.3-201ENST00000605967 1036 ntBASIC1.03□□□□□ -2.24
CISHQ9NSE2 AC097468.3-201ENST00000607956 456 ntBASIC1.03□□□□□ -2.24
CISHQ9NSE2 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.03□□□□□ -2.24
CISHQ9NSE2 AL512427.1-201ENST00000618593 349 ntBASIC1.03□□□□□ -2.24
CISHQ9NSE2 AL158163.2-201ENST00000619110 700 ntBASIC1.03□□□□□ -2.24
CISHQ9NSE2 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC1.03□□□□□ -2.24
CISHQ9NSE2 AP000943.4-201ENST00000622912 357 ntBASIC1.03□□□□□ -2.24
CISHQ9NSE2 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.03□□□□□ -2.24
CISHQ9NSE2 MTND5P42-201ENST00000637720 498 ntBASIC1.03□□□□□ -2.24
CISHQ9NSE2 AC092125.1-201ENST00000562568 1995 ntBASIC1.03□□□□□ -2.25
CISHQ9NSE2 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
CISHQ9NSE2 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.02□□□□□ -2.25
CISHQ9NSE2 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.02□□□□□ -2.25
CISHQ9NSE2 RNU6-1080P-201ENST00000383982 107 ntBASIC1.02□□□□□ -2.25
CISHQ9NSE2 RNU6-1025P-201ENST00000410629 104 ntBASIC1.02□□□□□ -2.25
CISHQ9NSE2 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.02□□□□□ -2.25
CISHQ9NSE2 USP9YP35-201ENST00000435696 412 ntBASIC1.02□□□□□ -2.25
CISHQ9NSE2 AC079448.1-201ENST00000449377 373 ntBASIC1.02□□□□□ -2.25
CISHQ9NSE2 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.02□□□□□ -2.25
CISHQ9NSE2 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
CISHQ9NSE2 AP000907.2-201ENST00000530827 353 ntBASIC1.02□□□□□ -2.25
CISHQ9NSE2 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.02□□□□□ -2.25
CISHQ9NSE2 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.02□□□□□ -2.25
CISHQ9NSE2 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.02□□□□□ -2.25
CISHQ9NSE2 MIR4781-201ENST00000585250 76 ntBASIC1.02□□□□□ -2.25
CISHQ9NSE2 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.02□□□□□ -2.25
CISHQ9NSE2 AC004908.3-201ENST00000610248 625 ntBASIC1.02□□□□□ -2.25
CISHQ9NSE2 AL365204.3-201ENST00000612448 685 ntBASIC1.02□□□□□ -2.25
CISHQ9NSE2 AC123767.1-202ENST00000620407 817 ntBASIC1.02□□□□□ -2.25
CISHQ9NSE2 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.01□□□□□ -2.25
CISHQ9NSE2 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
CISHQ9NSE2 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
CISHQ9NSE2 Y_RNA.33-201ENST00000362591 102 ntBASIC1.01□□□□□ -2.25
CISHQ9NSE2 RNU6-462P-201ENST00000362659 105 ntBASIC1.01□□□□□ -2.25
CISHQ9NSE2 RNU6-271P-201ENST00000363858 105 ntBASIC1.01□□□□□ -2.25
CISHQ9NSE2 RNU6-395P-201ENST00000365662 106 ntBASIC1.01□□□□□ -2.25
CISHQ9NSE2 RNU6-939P-201ENST00000384634 107 ntBASIC1.01□□□□□ -2.25
CISHQ9NSE2 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.01□□□□□ -2.25
CISHQ9NSE2 USP9YP33-201ENST00000412220 421 ntBASIC1.01□□□□□ -2.25
CISHQ9NSE2 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.01□□□□□ -2.25
CISHQ9NSE2 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.01□□□□□ -2.25
CISHQ9NSE2 UBE2V1P10-201ENST00000414685 269 ntBASIC1.01□□□□□ -2.25
CISHQ9NSE2 NCOR1P3-201ENST00000420479 303 ntBASIC1.01□□□□□ -2.25
CISHQ9NSE2 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.01□□□□□ -2.25
CISHQ9NSE2 CR769776.1-201ENST00000441254 787 ntBASIC1.01□□□□□ -2.25
CISHQ9NSE2 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.01□□□□□ -2.25
CISHQ9NSE2 MTND1P3-201ENST00000484956 952 ntBASIC1.01□□□□□ -2.25
CISHQ9NSE2 AC108729.1-201ENST00000487812 947 ntBASIC1.01□□□□□ -2.25
CISHQ9NSE2 RPS23P4-201ENST00000487908 423 ntBASIC1.01□□□□□ -2.25
CISHQ9NSE2 HMGB1P30-201ENST00000492455 606 ntBASIC1.01□□□□□ -2.25
CISHQ9NSE2 AC079395.1-201ENST00000510981 262 ntBASIC1.01□□□□□ -2.25
CISHQ9NSE2 RNVU1-2-201ENST00000516326 135 ntBASIC1.01□□□□□ -2.25
CISHQ9NSE2 SNORA31.17-201ENST00000516953 127 ntBASIC1.01□□□□□ -2.25
CISHQ9NSE2 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.01□□□□□ -2.25
CISHQ9NSE2 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.01□□□□□ -2.25
CISHQ9NSE2 CR383656.8-201ENST00000549046 145 ntBASIC1.01□□□□□ -2.25
CISHQ9NSE2 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.01□□□□□ -2.25
CISHQ9NSE2 AC019288.1-201ENST00000557918 224 ntBASIC1.01□□□□□ -2.25
CISHQ9NSE2 MTND3P13-201ENST00000574391 343 ntBASIC1.01□□□□□ -2.25
CISHQ9NSE2 MIR1273C-201ENST00000578669 77 ntBASIC1.01□□□□□ -2.25
CISHQ9NSE2 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
CISHQ9NSE2 AC103810.9-201ENST00000606688 112 ntBASIC1.01□□□□□ -2.25
CISHQ9NSE2 AC009269.6-201ENST00000621778 588 ntBASIC1.01□□□□□ -2.25
CISHQ9NSE2 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
CISHQ9NSE2 MIR337-201ENST00000362281 93 ntBASIC1□□□□□ -2.25
CISHQ9NSE2 SNORA63.3-201ENST00000362682 132 ntBASIC1□□□□□ -2.25
CISHQ9NSE2 RNU6-944P-201ENST00000364023 107 ntBASIC1□□□□□ -2.25
CISHQ9NSE2 RNU6-622P-201ENST00000384272 103 ntBASIC1□□□□□ -2.25
CISHQ9NSE2 RNU2-23P-201ENST00000410545 195 ntBASIC1□□□□□ -2.25
CISHQ9NSE2 AL606517.1-201ENST00000446914 387 ntBASIC1□□□□□ -2.25
CISHQ9NSE2 OR2A41P-201ENST00000473586 105 ntBASIC1□□□□□ -2.25
CISHQ9NSE2 AC010409.1-201ENST00000487382 476 ntBASIC1□□□□□ -2.25
CISHQ9NSE2 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1□□□□□ -2.25
CISHQ9NSE2 MTCYBP40-201ENST00000509390 1135 ntBASIC1□□□□□ -2.25
CISHQ9NSE2 AC109445.1-201ENST00000512356 383 ntBASIC1□□□□□ -2.25
CISHQ9NSE2 RNA5SP102-201ENST00000516865 106 ntBASIC1□□□□□ -2.25
CISHQ9NSE2 IGHVII-53-1-201ENST00000519538 255 ntBASIC1□□□□□ -2.25
CISHQ9NSE2 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1□□□□□ -2.25
CISHQ9NSE2 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1□□□□□ -2.25
CISHQ9NSE2 RPL21P5-201ENST00000554662 472 ntBASIC1□□□□□ -2.25
CISHQ9NSE2 AC009712.1-201ENST00000564938 316 ntBASIC1□□□□□ -2.25
CISHQ9NSE2 AC002400.1-201ENST00000569310 726 ntBASIC1□□□□□ -2.25
CISHQ9NSE2 AL596327.1-201ENST00000603629 213 ntBASIC1□□□□□ -2.25
CISHQ9NSE2 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1□□□□□ -2.25
CISHQ9NSE2 MIR96-201ENST00000362288 78 ntBASIC0.99□□□□□ -2.25
CISHQ9NSE2 Y_RNA.4-201ENST00000362333 112 ntBASIC0.99□□□□□ -2.25
CISHQ9NSE2 RNU6-23P-201ENST00000363283 107 ntBASIC0.99□□□□□ -2.25
CISHQ9NSE2 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.99□□□□□ -2.25
CISHQ9NSE2 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.99□□□□□ -2.25
CISHQ9NSE2 RNU6-160P-201ENST00000384591 107 ntBASIC0.99□□□□□ -2.25
CISHQ9NSE2 MIR618-201ENST00000385287 98 ntBASIC0.99□□□□□ -2.25
CISHQ9NSE2 MIR1305-201ENST00000408300 86 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 169.8 ms