Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.67□□□□□ -1.82
VTA1Q9NP79 Y_RNA.639-201ENST00000458981 102 ntBASIC3.67□□□□□ -1.82
VTA1Q9NP79 snoU109.2-201ENST00000459316 135 ntBASIC3.67□□□□□ -1.82
VTA1Q9NP79 AC133134.1-201ENST00000466800 359 ntBASIC3.67□□□□□ -1.82
VTA1Q9NP79 AC008571.1-201ENST00000467232 300 ntBASIC3.67□□□□□ -1.82
VTA1Q9NP79 AC010265.1-201ENST00000513509 211 ntBASIC3.67□□□□□ -1.82
VTA1Q9NP79 AL121821.2-201ENST00000556081 394 ntBASIC3.67□□□□□ -1.82
VTA1Q9NP79 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.67□□□□□ -1.82
VTA1Q9NP79 BNIP3P16-201ENST00000589779 534 ntBASIC3.67□□□□□ -1.82
VTA1Q9NP79 RMST_8.1-201ENST00000610287 165 ntBASIC3.67□□□□□ -1.82
VTA1Q9NP79 uc_338.1-201ENST00000612113 180 ntBASIC3.67□□□□□ -1.82
VTA1Q9NP79 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.67□□□□□ -1.82
VTA1Q9NP79 AC018692.3-201ENST00000623929 123 ntBASIC3.67□□□□□ -1.82
VTA1Q9NP79 AC134503.1-201ENST00000633048 54 ntBASIC3.67□□□□□ -1.82
VTA1Q9NP79 AL669831.3-213ENST00000636676 183 ntBASIC3.67□□□□□ -1.82
VTA1Q9NP79 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
VTA1Q9NP79 AL079305.1-201ENST00000623159 3008 ntBASIC3.67□□□□□ -1.82
VTA1Q9NP79 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VTA1Q9NP79 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.66□□□□□ -1.82
VTA1Q9NP79 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VTA1Q9NP79 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VTA1Q9NP79 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
VTA1Q9NP79 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
VTA1Q9NP79 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VTA1Q9NP79 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.66□□□□□ -1.82
VTA1Q9NP79 RNU6-942P-201ENST00000363002 107 ntBASIC3.66□□□□□ -1.82
VTA1Q9NP79 Y_RNA.151-201ENST00000363566 112 ntBASIC3.66□□□□□ -1.82
VTA1Q9NP79 RNU1-100P-201ENST00000365255 165 ntBASIC3.66□□□□□ -1.82
VTA1Q9NP79 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
VTA1Q9NP79 AL513475.1-201ENST00000406602 315 ntBASIC3.66□□□□□ -1.82
VTA1Q9NP79 RNU6-325P-201ENST00000411132 105 ntBASIC3.66□□□□□ -1.82
VTA1Q9NP79 AC096649.2-201ENST00000416186 393 ntBASIC3.66□□□□□ -1.82
VTA1Q9NP79 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.66□□□□□ -1.82
VTA1Q9NP79 USMG5P1-201ENST00000425964 177 ntBASIC3.66□□□□□ -1.82
VTA1Q9NP79 AL133396.1-201ENST00000432048 687 ntBASIC3.66□□□□□ -1.82
VTA1Q9NP79 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.66□□□□□ -1.82
VTA1Q9NP79 AC007677.1-201ENST00000445757 515 ntBASIC3.66□□□□□ -1.82
VTA1Q9NP79 AC093249.1-201ENST00000567049 203 ntBASIC3.66□□□□□ -1.82
VTA1Q9NP79 MIR2682-201ENST00000580305 110 ntBASIC3.66□□□□□ -1.82
VTA1Q9NP79 AL356157.2-201ENST00000605122 111 ntBASIC3.66□□□□□ -1.82
VTA1Q9NP79 MTND4LP5-201ENST00000605152 292 ntBASIC3.66□□□□□ -1.82
VTA1Q9NP79 AC080078.3-201ENST00000605407 463 ntBASIC3.66□□□□□ -1.82
VTA1Q9NP79 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.66□□□□□ -1.82
VTA1Q9NP79 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.66□□□□□ -1.82
VTA1Q9NP79 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.66□□□□□ -1.82
VTA1Q9NP79 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VTA1Q9NP79 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
VTA1Q9NP79 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
VTA1Q9NP79 AC093908.1-201ENST00000623125 8092 ntBASIC3.65□□□□□ -1.82
VTA1Q9NP79 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
VTA1Q9NP79 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
VTA1Q9NP79 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
VTA1Q9NP79 Y_RNA.128-201ENST00000363391 112 ntBASIC3.65□□□□□ -1.83
VTA1Q9NP79 SNORA63-201ENST00000363450 132 ntBASIC3.65□□□□□ -1.83
VTA1Q9NP79 RNU1-140P-201ENST00000365040 165 ntBASIC3.65□□□□□ -1.83
VTA1Q9NP79 SNORD42.2-201ENST00000365570 69 ntBASIC3.65□□□□□ -1.83
VTA1Q9NP79 SNORA7.4-201ENST00000384249 137 ntBASIC3.65□□□□□ -1.83
VTA1Q9NP79 RNU6-1245P-201ENST00000411130 106 ntBASIC3.65□□□□□ -1.83
VTA1Q9NP79 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.65□□□□□ -1.83
VTA1Q9NP79 AL591043.1-201ENST00000432461 424 ntBASIC3.65□□□□□ -1.83
VTA1Q9NP79 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.65□□□□□ -1.83
VTA1Q9NP79 AC236972.1-201ENST00000433225 199 ntBASIC3.65□□□□□ -1.83
VTA1Q9NP79 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.65□□□□□ -1.83
VTA1Q9NP79 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.65□□□□□ -1.83
VTA1Q9NP79 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
VTA1Q9NP79 AC116655.1-201ENST00000508324 901 ntBASIC3.65□□□□□ -1.83
VTA1Q9NP79 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.65□□□□□ -1.83
VTA1Q9NP79 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.65□□□□□ -1.83
VTA1Q9NP79 SNORA31.21-201ENST00000517180 77 ntBASIC3.65□□□□□ -1.83
VTA1Q9NP79 AC022634.1-201ENST00000520765 532 ntBASIC3.65□□□□□ -1.83
VTA1Q9NP79 MIR4738-201ENST00000579134 87 ntBASIC3.65□□□□□ -1.83
VTA1Q9NP79 LARP7P3-201ENST00000579888 337 ntBASIC3.65□□□□□ -1.83
VTA1Q9NP79 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.65□□□□□ -1.83
VTA1Q9NP79 AC011494.1-201ENST00000596454 237 ntBASIC3.65□□□□□ -1.83
VTA1Q9NP79 AC009229.3-201ENST00000608056 282 ntBASIC3.65□□□□□ -1.83
VTA1Q9NP79 MIR3529-201ENST00000637713 78 ntBASIC3.65□□□□□ -1.83
VTA1Q9NP79 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.65□□□□□ -1.83
VTA1Q9NP79 GABRG2-229ENST00000641017 3628 ntBASIC3.64□□□□□ -1.83
VTA1Q9NP79 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
VTA1Q9NP79 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
VTA1Q9NP79 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
VTA1Q9NP79 AC008669.1-201ENST00000565823 2178 ntBASIC3.64□□□□□ -1.83
VTA1Q9NP79 RNU6-105P-201ENST00000363909 104 ntBASIC3.64□□□□□ -1.83
VTA1Q9NP79 RNU6-487P-201ENST00000365430 104 ntBASIC3.64□□□□□ -1.83
VTA1Q9NP79 Y_RNA.395-201ENST00000383945 109 ntBASIC3.64□□□□□ -1.83
VTA1Q9NP79 SNORA41-201ENST00000384675 132 ntBASIC3.64□□□□□ -1.83
VTA1Q9NP79 Y_RNA.579-201ENST00000390939 94 ntBASIC3.64□□□□□ -1.83
VTA1Q9NP79 SNORA75.6-201ENST00000391318 127 ntBASIC3.64□□□□□ -1.83
VTA1Q9NP79 AL591034.2-201ENST00000402839 359 ntBASIC3.64□□□□□ -1.83
VTA1Q9NP79 RNA5SP229-201ENST00000410809 99 ntBASIC3.64□□□□□ -1.83
VTA1Q9NP79 AL354751.2-201ENST00000415471 210 ntBASIC3.64□□□□□ -1.83
VTA1Q9NP79 USP9YP30-201ENST00000430729 455 ntBASIC3.64□□□□□ -1.83
VTA1Q9NP79 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.64□□□□□ -1.83
VTA1Q9NP79 RPL30P15-201ENST00000457129 321 ntBASIC3.64□□□□□ -1.83
VTA1Q9NP79 CENPBD1P1-201ENST00000464061 469 ntBASIC3.64□□□□□ -1.83
VTA1Q9NP79 AC027575.1-201ENST00000481064 460 ntBASIC3.64□□□□□ -1.83
VTA1Q9NP79 Y_RNA.670-201ENST00000516255 105 ntBASIC3.64□□□□□ -1.83
VTA1Q9NP79 AC093331.1-201ENST00000521474 169 ntBASIC3.64□□□□□ -1.83
VTA1Q9NP79 AP002404.1-201ENST00000532005 451 ntBASIC3.64□□□□□ -1.83
VTA1Q9NP79 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms