Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 RANP3-201ENST00000530970 276 ntBASIC1.67□□□□□ -2.14
HMG20AQ9NP66 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.67□□□□□ -2.14
HMG20AQ9NP66 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.67□□□□□ -2.14
HMG20AQ9NP66 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.67□□□□□ -2.14
HMG20AQ9NP66 MIR3618-201ENST00000580330 88 ntBASIC1.67□□□□□ -2.14
HMG20AQ9NP66 AC008088.1-201ENST00000580993 280 ntBASIC1.67□□□□□ -2.14
HMG20AQ9NP66 MIR4775-201ENST00000581168 75 ntBASIC1.67□□□□□ -2.14
HMG20AQ9NP66 AC119751.7-201ENST00000600494 245 ntBASIC1.67□□□□□ -2.14
HMG20AQ9NP66 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.67□□□□□ -2.14
HMG20AQ9NP66 AL109918.3-201ENST00000603072 338 ntBASIC1.67□□□□□ -2.14
HMG20AQ9NP66 AL138889.2-201ENST00000603883 242 ntBASIC1.67□□□□□ -2.14
HMG20AQ9NP66 AL138963.2-201ENST00000605137 226 ntBASIC1.67□□□□□ -2.14
HMG20AQ9NP66 AC093788.1-201ENST00000609356 927 ntBASIC1.67□□□□□ -2.14
HMG20AQ9NP66 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.67□□□□□ -2.14
HMG20AQ9NP66 U6.42-201ENST00000618440 107 ntBASIC1.67□□□□□ -2.14
HMG20AQ9NP66 AC136475.10-201ENST00000620253 385 ntBASIC1.67□□□□□ -2.14
HMG20AQ9NP66 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.67□□□□□ -2.14
HMG20AQ9NP66 AC244517.12-201ENST00000623581 663 ntBASIC1.67□□□□□ -2.14
HMG20AQ9NP66 AC064859.1-201ENST00000624741 174 ntBASIC1.67□□□□□ -2.14
HMG20AQ9NP66 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.67□□□□□ -2.14
HMG20AQ9NP66 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.67□□□□□ -2.14
HMG20AQ9NP66 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
HMG20AQ9NP66 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMG20AQ9NP66 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
HMG20AQ9NP66 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HMG20AQ9NP66 RNU6-181P-201ENST00000363225 107 ntBASIC1.66□□□□□ -2.14
HMG20AQ9NP66 RNU6-1303P-201ENST00000364841 107 ntBASIC1.66□□□□□ -2.14
HMG20AQ9NP66 MIR23A-201ENST00000385245 73 ntBASIC1.66□□□□□ -2.14
HMG20AQ9NP66 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
HMG20AQ9NP66 RNU6-550P-201ENST00000391057 101 ntBASIC1.66□□□□□ -2.14
HMG20AQ9NP66 SNORA3.2-201ENST00000408221 125 ntBASIC1.66□□□□□ -2.14
HMG20AQ9NP66 RN7SKP223-201ENST00000410582 62 ntBASIC1.66□□□□□ -2.14
HMG20AQ9NP66 SNORD56-201ENST00000413522 71 ntBASIC1.66□□□□□ -2.14
HMG20AQ9NP66 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.66□□□□□ -2.14
HMG20AQ9NP66 OR6C66P-201ENST00000414917 930 ntBASIC1.66□□□□□ -2.14
HMG20AQ9NP66 AL353621.1-201ENST00000418219 243 ntBASIC1.66□□□□□ -2.14
HMG20AQ9NP66 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.66□□□□□ -2.14
HMG20AQ9NP66 EIF4EP4-201ENST00000424916 578 ntBASIC1.66□□□□□ -2.14
HMG20AQ9NP66 NDUFB1P2-201ENST00000449477 176 ntBASIC1.66□□□□□ -2.14
HMG20AQ9NP66 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.66□□□□□ -2.14
HMG20AQ9NP66 RPL23AP42-201ENST00000471152 471 ntBASIC1.66□□□□□ -2.14
HMG20AQ9NP66 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.66□□□□□ -2.14
HMG20AQ9NP66 MTCO3P9-201ENST00000506989 781 ntBASIC1.66□□□□□ -2.14
HMG20AQ9NP66 AC008526.1-201ENST00000509149 338 ntBASIC1.66□□□□□ -2.14
HMG20AQ9NP66 AF213884.2-201ENST00000510417 903 ntBASIC1.66□□□□□ -2.14
HMG20AQ9NP66 AC008549.1-201ENST00000512900 643 ntBASIC1.66□□□□□ -2.14
HMG20AQ9NP66 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.66□□□□□ -2.14
HMG20AQ9NP66 MIR892C-201ENST00000516410 77 ntBASIC1.66□□□□□ -2.14
HMG20AQ9NP66 Y_RNA.695-201ENST00000516715 107 ntBASIC1.66□□□□□ -2.14
HMG20AQ9NP66 RNU6-445P-201ENST00000516949 107 ntBASIC1.66□□□□□ -2.14
HMG20AQ9NP66 RNU6-410P-201ENST00000517006 107 ntBASIC1.66□□□□□ -2.14
HMG20AQ9NP66 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.66□□□□□ -2.14
HMG20AQ9NP66 BNIP3P6-201ENST00000549284 499 ntBASIC1.66□□□□□ -2.14
HMG20AQ9NP66 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.66□□□□□ -2.14
HMG20AQ9NP66 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.66□□□□□ -2.14
HMG20AQ9NP66 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.66□□□□□ -2.14
HMG20AQ9NP66 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.66□□□□□ -2.14
HMG20AQ9NP66 MIR4287-201ENST00000579398 78 ntBASIC1.66□□□□□ -2.14
HMG20AQ9NP66 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.66□□□□□ -2.14
HMG20AQ9NP66 MIR4435-1-201ENST00000582552 80 ntBASIC1.66□□□□□ -2.14
HMG20AQ9NP66 AC007229.1-201ENST00000590455 412 ntBASIC1.66□□□□□ -2.14
HMG20AQ9NP66 BNIP3P30-201ENST00000601184 574 ntBASIC1.66□□□□□ -2.14
HMG20AQ9NP66 NDUFA8P1-201ENST00000605525 367 ntBASIC1.66□□□□□ -2.14
HMG20AQ9NP66 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.66□□□□□ -2.14
HMG20AQ9NP66 AC138649.3-201ENST00000622154 254 ntBASIC1.66□□□□□ -2.14
HMG20AQ9NP66 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.66□□□□□ -2.14
HMG20AQ9NP66 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.66□□□□□ -2.14
HMG20AQ9NP66 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
HMG20AQ9NP66 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
HMG20AQ9NP66 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.66□□□□□ -2.14
HMG20AQ9NP66 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
HMG20AQ9NP66 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
HMG20AQ9NP66 Y_RNA.111-201ENST00000363248 100 ntBASIC1.65□□□□□ -2.15
HMG20AQ9NP66 RNU6-529P-201ENST00000363383 104 ntBASIC1.65□□□□□ -2.15
HMG20AQ9NP66 RNU4-91P-201ENST00000364778 135 ntBASIC1.65□□□□□ -2.15
HMG20AQ9NP66 SNORD48-201ENST00000364953 64 ntBASIC1.65□□□□□ -2.15
HMG20AQ9NP66 RNA5SP363-201ENST00000365072 115 ntBASIC1.65□□□□□ -2.15
HMG20AQ9NP66 RNU6-456P-201ENST00000384493 107 ntBASIC1.65□□□□□ -2.15
HMG20AQ9NP66 SNORD116-20-201ENST00000384529 92 ntBASIC1.65□□□□□ -2.15
HMG20AQ9NP66 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.65□□□□□ -2.15
HMG20AQ9NP66 RNU2-9P-201ENST00000410194 145 ntBASIC1.65□□□□□ -2.15
HMG20AQ9NP66 RNA5SP508-201ENST00000411327 119 ntBASIC1.65□□□□□ -2.15
HMG20AQ9NP66 CYCSP33-201ENST00000414485 327 ntBASIC1.65□□□□□ -2.15
HMG20AQ9NP66 UBE2V1P10-201ENST00000414685 269 ntBASIC1.65□□□□□ -2.15
HMG20AQ9NP66 AC008267.5-201ENST00000424928 265 ntBASIC1.65□□□□□ -2.15
HMG20AQ9NP66 AIMP1P2-201ENST00000425294 312 ntBASIC1.65□□□□□ -2.15
HMG20AQ9NP66 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.65□□□□□ -2.15
HMG20AQ9NP66 MTATP6P17-201ENST00000431030 672 ntBASIC1.65□□□□□ -2.15
HMG20AQ9NP66 AL139415.2-201ENST00000431968 163 ntBASIC1.65□□□□□ -2.15
HMG20AQ9NP66 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.65□□□□□ -2.15
HMG20AQ9NP66 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.65□□□□□ -2.15
HMG20AQ9NP66 MTND4P32-201ENST00000437189 1237 ntBASIC1.65□□□□□ -2.15
HMG20AQ9NP66 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.65□□□□□ -2.15
HMG20AQ9NP66 KATNBL1P3-201ENST00000443475 909 ntBASIC1.65□□□□□ -2.15
HMG20AQ9NP66 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.65□□□□□ -2.15
HMG20AQ9NP66 AL441985.1-201ENST00000457727 251 ntBASIC1.65□□□□□ -2.15
HMG20AQ9NP66 RPL21P99-201ENST00000480369 423 ntBASIC1.65□□□□□ -2.15
HMG20AQ9NP66 AP001025.1-201ENST00000486139 332 ntBASIC1.65□□□□□ -2.15
HMG20AQ9NP66 RPL22P13-201ENST00000493291 347 ntBASIC1.65□□□□□ -2.15
HMG20AQ9NP66 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms