Protein–RNA interactions for Protein: Q9H9J4

USP42, Ubiquitin carboxyl-terminal hydrolase 42, humanhuman

Known RBP Predictions only

Length 1,324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP42Q9H9J4 RPL7P43-201ENST00000478876 753 ntBASIC1.45□□□□□ -2.18
USP42Q9H9J4 IMMP1LP2-201ENST00000552954 492 ntBASIC1.45□□□□□ -2.18
USP42Q9H9J4 AC136619.2-201ENST00000563361 631 ntBASIC1.45□□□□□ -2.18
USP42Q9H9J4 MIR4295-201ENST00000585286 85 ntBASIC1.45□□□□□ -2.18
USP42Q9H9J4 AC016925.2-201ENST00000605108 242 ntBASIC1.45□□□□□ -2.18
USP42Q9H9J4 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.45□□□□□ -2.18
USP42Q9H9J4 AC099842.1-201ENST00000619919 596 ntBASIC1.45□□□□□ -2.18
USP42Q9H9J4 AC009269.6-201ENST00000621778 588 ntBASIC1.45□□□□□ -2.18
USP42Q9H9J4 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.45□□□□□ -2.18
USP42Q9H9J4 RBBP8P1-201ENST00000449447 1844 ntBASIC1.45□□□□□ -2.18
USP42Q9H9J4 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
USP42Q9H9J4 MIR186-201ENST00000384988 86 ntBASIC1.44□□□□□ -2.18
USP42Q9H9J4 RNA5SP501-201ENST00000410990 112 ntBASIC1.44□□□□□ -2.18
USP42Q9H9J4 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.44□□□□□ -2.18
USP42Q9H9J4 KATNBL1P3-201ENST00000443475 909 ntBASIC1.44□□□□□ -2.18
USP42Q9H9J4 AC007327.1-201ENST00000447461 264 ntBASIC1.44□□□□□ -2.18
USP42Q9H9J4 AC016550.1-201ENST00000505348 785 ntBASIC1.44□□□□□ -2.18
USP42Q9H9J4 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.44□□□□□ -2.18
USP42Q9H9J4 FAM206BP-201ENST00000510179 541 ntBASIC1.44□□□□□ -2.18
USP42Q9H9J4 AC079395.1-201ENST00000510981 262 ntBASIC1.44□□□□□ -2.18
USP42Q9H9J4 RNU6-276P-201ENST00000516114 96 ntBASIC1.44□□□□□ -2.18
USP42Q9H9J4 RNU6-113P-201ENST00000516653 101 ntBASIC1.44□□□□□ -2.18
USP42Q9H9J4 RNU6-965P-201ENST00000516721 96 ntBASIC1.44□□□□□ -2.18
USP42Q9H9J4 AC135279.1-201ENST00000543493 504 ntBASIC1.44□□□□□ -2.18
USP42Q9H9J4 CLIC4P2-201ENST00000601934 717 ntBASIC1.44□□□□□ -2.18
USP42Q9H9J4 AP001981.2-201ENST00000603241 418 ntBASIC1.44□□□□□ -2.18
USP42Q9H9J4 uc_338.15-201ENST00000615470 191 ntBASIC1.44□□□□□ -2.18
USP42Q9H9J4 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.44□□□□□ -2.18
USP42Q9H9J4 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.44□□□□□ -2.18
USP42Q9H9J4 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.44□□□□□ -2.18
USP42Q9H9J4 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.44□□□□□ -2.18
USP42Q9H9J4 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
USP42Q9H9J4 SNORA4.3-201ENST00000365564 137 ntBASIC1.43□□□□□ -2.18
USP42Q9H9J4 UBE2V1P10-201ENST00000414685 269 ntBASIC1.43□□□□□ -2.18
USP42Q9H9J4 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.43□□□□□ -2.18
USP42Q9H9J4 UBE2V1P4-201ENST00000425374 344 ntBASIC1.43□□□□□ -2.18
USP42Q9H9J4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.43□□□□□ -2.18
USP42Q9H9J4 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.43□□□□□ -2.18
USP42Q9H9J4 AC093899.1-201ENST00000457984 376 ntBASIC1.43□□□□□ -2.18
USP42Q9H9J4 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.43□□□□□ -2.18
USP42Q9H9J4 AC104982.1-201ENST00000478775 574 ntBASIC1.43□□□□□ -2.18
USP42Q9H9J4 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.43□□□□□ -2.18
USP42Q9H9J4 SNORA44.1-201ENST00000517031 108 ntBASIC1.43□□□□□ -2.18
USP42Q9H9J4 AC091163.3-201ENST00000518269 1144 ntBASIC1.43□□□□□ -2.18
USP42Q9H9J4 AC009712.1-201ENST00000564938 316 ntBASIC1.43□□□□□ -2.18
USP42Q9H9J4 AC012065.4-201ENST00000602445 679 ntBASIC1.43□□□□□ -2.18
USP42Q9H9J4 CYP2C61P-201ENST00000604072 290 ntBASIC1.43□□□□□ -2.18
USP42Q9H9J4 AL358072.1-201ENST00000604156 575 ntBASIC1.43□□□□□ -2.18
USP42Q9H9J4 Z82243.1-201ENST00000609432 473 ntBASIC1.43□□□□□ -2.18
USP42Q9H9J4 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.43□□□□□ -2.18
USP42Q9H9J4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
USP42Q9H9J4 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.43□□□□□ -2.18
USP42Q9H9J4 RNU5A-8P-201ENST00000364102 114 ntBASIC1.42□□□□□ -2.18
USP42Q9H9J4 SNORA18.2-201ENST00000383865 132 ntBASIC1.42□□□□□ -2.18
USP42Q9H9J4 BTF3L4P2-201ENST00000392798 346 ntBASIC1.42□□□□□ -2.18
USP42Q9H9J4 MIR934-201ENST00000401241 83 ntBASIC1.42□□□□□ -2.18
USP42Q9H9J4 ERHP2-201ENST00000402323 299 ntBASIC1.42□□□□□ -2.18
USP42Q9H9J4 AC016831.2-201ENST00000417179 352 ntBASIC1.42□□□□□ -2.18
USP42Q9H9J4 EIF4EP2-201ENST00000422816 654 ntBASIC1.42□□□□□ -2.18
USP42Q9H9J4 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.42□□□□□ -2.18
USP42Q9H9J4 AL591212.2-201ENST00000433923 257 ntBASIC1.42□□□□□ -2.18
USP42Q9H9J4 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.42□□□□□ -2.18
USP42Q9H9J4 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.42□□□□□ -2.18
USP42Q9H9J4 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.42□□□□□ -2.18
USP42Q9H9J4 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.42□□□□□ -2.18
USP42Q9H9J4 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.42□□□□□ -2.18
USP42Q9H9J4 MED28P2-201ENST00000475771 317 ntBASIC1.42□□□□□ -2.18
USP42Q9H9J4 MTND1P3-201ENST00000484956 952 ntBASIC1.42□□□□□ -2.18
USP42Q9H9J4 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.42□□□□□ -2.18
USP42Q9H9J4 AC116353.3-201ENST00000511215 249 ntBASIC1.42□□□□□ -2.18
USP42Q9H9J4 PTP4A1P4-201ENST00000512479 322 ntBASIC1.42□□□□□ -2.18
USP42Q9H9J4 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.42□□□□□ -2.18
USP42Q9H9J4 AL596327.1-201ENST00000603629 213 ntBASIC1.42□□□□□ -2.18
USP42Q9H9J4 MTND3P19-201ENST00000603825 345 ntBASIC1.42□□□□□ -2.18
USP42Q9H9J4 AC006386.1-201ENST00000619436 415 ntBASIC1.42□□□□□ -2.18
USP42Q9H9J4 AC092656.1-203ENST00000624134 423 ntBASIC1.42□□□□□ -2.18
USP42Q9H9J4 HAUS6P2-201ENST00000433254 2404 ntBASIC1.42□□□□□ -2.18
USP42Q9H9J4 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
USP42Q9H9J4 MIR373-201ENST00000362273 69 ntBASIC1.41□□□□□ -2.18
USP42Q9H9J4 Y_RNA.192-201ENST00000363977 102 ntBASIC1.41□□□□□ -2.18
USP42Q9H9J4 SNORD116.1-201ENST00000365628 92 ntBASIC1.41□□□□□ -2.18
USP42Q9H9J4 SNORD14D-201ENST00000384390 87 ntBASIC1.41□□□□□ -2.18
USP42Q9H9J4 RNU6-1274P-201ENST00000384557 107 ntBASIC1.41□□□□□ -2.18
USP42Q9H9J4 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
USP42Q9H9J4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
USP42Q9H9J4 RNU6-817P-201ENST00000391083 104 ntBASIC1.41□□□□□ -2.18
USP42Q9H9J4 SNORA40C-201ENST00000391285 128 ntBASIC1.41□□□□□ -2.18
USP42Q9H9J4 AL136310.1-201ENST00000404926 654 ntBASIC1.41□□□□□ -2.18
USP42Q9H9J4 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.41□□□□□ -2.18
USP42Q9H9J4 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.41□□□□□ -2.18
USP42Q9H9J4 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.41□□□□□ -2.18
USP42Q9H9J4 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.41□□□□□ -2.18
USP42Q9H9J4 AL139824.2-201ENST00000458731 1095 ntBASIC1.41□□□□□ -2.18
USP42Q9H9J4 AC019176.1-201ENST00000518519 225 ntBASIC1.41□□□□□ -2.18
USP42Q9H9J4 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.41□□□□□ -2.18
USP42Q9H9J4 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.41□□□□□ -2.18
USP42Q9H9J4 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.41□□□□□ -2.18
USP42Q9H9J4 AC022254.1-201ENST00000567857 235 ntBASIC1.41□□□□□ -2.18
USP42Q9H9J4 BNIP3P30-201ENST00000601184 574 ntBASIC1.41□□□□□ -2.18
USP42Q9H9J4 AP001485.1-201ENST00000604799 199 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms