Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AC103987.3-201ENST00000582071 292 ntBASIC2.04□□□□□ -2.08
NXF3Q9H4D5 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.04□□□□□ -2.08
NXF3Q9H4D5 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.04□□□□□ -2.08
NXF3Q9H4D5 NDUFA8P1-201ENST00000605525 367 ntBASIC2.04□□□□□ -2.08
NXF3Q9H4D5 Z99129.1-201ENST00000612510 255 ntBASIC2.04□□□□□ -2.08
NXF3Q9H4D5 AC012409.4-201ENST00000612923 249 ntBASIC2.04□□□□□ -2.08
NXF3Q9H4D5 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
NXF3Q9H4D5 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
NXF3Q9H4D5 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
NXF3Q9H4D5 NACAP2-201ENST00000318548 624 ntBASIC2.03□□□□□ -2.08
NXF3Q9H4D5 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.03□□□□□ -2.08
NXF3Q9H4D5 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
NXF3Q9H4D5 Y_RNA.436-201ENST00000384097 102 ntBASIC2.03□□□□□ -2.08
NXF3Q9H4D5 RNU5A-6P-201ENST00000384136 116 ntBASIC2.03□□□□□ -2.08
NXF3Q9H4D5 RNU6-1042P-201ENST00000384204 107 ntBASIC2.03□□□□□ -2.08
NXF3Q9H4D5 Y_RNA.559-201ENST00000384686 107 ntBASIC2.03□□□□□ -2.08
NXF3Q9H4D5 MIR1-2-201ENST00000384961 85 ntBASIC2.03□□□□□ -2.08
NXF3Q9H4D5 MIR454-201ENST00000390180 115 ntBASIC2.03□□□□□ -2.08
NXF3Q9H4D5 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
NXF3Q9H4D5 RNU2-16P-201ENST00000410712 136 ntBASIC2.03□□□□□ -2.08
NXF3Q9H4D5 HMGB3P2-201ENST00000411913 584 ntBASIC2.03□□□□□ -2.08
NXF3Q9H4D5 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.03□□□□□ -2.08
NXF3Q9H4D5 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.03□□□□□ -2.08
NXF3Q9H4D5 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.03□□□□□ -2.08
NXF3Q9H4D5 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.03□□□□□ -2.08
NXF3Q9H4D5 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.03□□□□□ -2.08
NXF3Q9H4D5 USP9YP14-201ENST00000430663 563 ntBASIC2.03□□□□□ -2.08
NXF3Q9H4D5 VN1R108P-201ENST00000431580 830 ntBASIC2.03□□□□□ -2.08
NXF3Q9H4D5 GPM6BP3-201ENST00000442797 145 ntBASIC2.03□□□□□ -2.08
NXF3Q9H4D5 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.03□□□□□ -2.08
NXF3Q9H4D5 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.03□□□□□ -2.08
NXF3Q9H4D5 AC022364.2-201ENST00000457963 554 ntBASIC2.03□□□□□ -2.08
NXF3Q9H4D5 AC023194.1-201ENST00000493084 308 ntBASIC2.03□□□□□ -2.08
NXF3Q9H4D5 AC139453.3-201ENST00000493276 369 ntBASIC2.03□□□□□ -2.08
NXF3Q9H4D5 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
NXF3Q9H4D5 RNU6-1315P-201ENST00000517187 99 ntBASIC2.03□□□□□ -2.08
NXF3Q9H4D5 ADI1P3-201ENST00000549509 470 ntBASIC2.03□□□□□ -2.08
NXF3Q9H4D5 AC021739.1-201ENST00000559631 174 ntBASIC2.03□□□□□ -2.08
NXF3Q9H4D5 MIR1273C-201ENST00000578669 77 ntBASIC2.03□□□□□ -2.08
NXF3Q9H4D5 MTND1P15-201ENST00000579262 949 ntBASIC2.03□□□□□ -2.08
NXF3Q9H4D5 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.03□□□□□ -2.08
NXF3Q9H4D5 AC091805.2-201ENST00000603848 235 ntBASIC2.03□□□□□ -2.08
NXF3Q9H4D5 AC064807.4-201ENST00000607201 407 ntBASIC2.03□□□□□ -2.08
NXF3Q9H4D5 AC104073.3-201ENST00000610942 955 ntBASIC2.03□□□□□ -2.08
NXF3Q9H4D5 AL031601.2-202ENST00000622650 282 ntBASIC2.03□□□□□ -2.08
NXF3Q9H4D5 AC009161.2-201ENST00000624626 138 ntBASIC2.03□□□□□ -2.08
NXF3Q9H4D5 AL512643.1-201ENST00000635735 524 ntBASIC2.03□□□□□ -2.08
NXF3Q9H4D5 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
NXF3Q9H4D5 Y_RNA.318-201ENST00000365131 97 ntBASIC2.02□□□□□ -2.09
NXF3Q9H4D5 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.02□□□□□ -2.09
NXF3Q9H4D5 RNU6-456P-201ENST00000384493 107 ntBASIC2.02□□□□□ -2.09
NXF3Q9H4D5 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
NXF3Q9H4D5 RNA5SP338-201ENST00000410495 85 ntBASIC2.02□□□□□ -2.09
NXF3Q9H4D5 RNU2-66P-201ENST00000410650 161 ntBASIC2.02□□□□□ -2.09
NXF3Q9H4D5 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.02□□□□□ -2.09
NXF3Q9H4D5 USP9YP6-201ENST00000413550 854 ntBASIC2.02□□□□□ -2.09
NXF3Q9H4D5 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.02□□□□□ -2.09
NXF3Q9H4D5 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.02□□□□□ -2.09
NXF3Q9H4D5 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.02□□□□□ -2.09
NXF3Q9H4D5 AL353729.1-201ENST00000425044 720 ntBASIC2.02□□□□□ -2.09
NXF3Q9H4D5 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
NXF3Q9H4D5 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.02□□□□□ -2.09
NXF3Q9H4D5 BRK1P2-201ENST00000442875 223 ntBASIC2.02□□□□□ -2.09
NXF3Q9H4D5 AC104058.1-201ENST00000448028 297 ntBASIC2.02□□□□□ -2.09
NXF3Q9H4D5 PSPHP1-201ENST00000450062 261 ntBASIC2.02□□□□□ -2.09
NXF3Q9H4D5 AL441985.1-201ENST00000457727 251 ntBASIC2.02□□□□□ -2.09
NXF3Q9H4D5 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.02□□□□□ -2.09
NXF3Q9H4D5 AC108078.1-201ENST00000508073 725 ntBASIC2.02□□□□□ -2.09
NXF3Q9H4D5 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.02□□□□□ -2.09
NXF3Q9H4D5 RNU6-123P-201ENST00000516163 102 ntBASIC2.02□□□□□ -2.09
NXF3Q9H4D5 RNU6-685P-201ENST00000517088 95 ntBASIC2.02□□□□□ -2.09
NXF3Q9H4D5 AC009902.1-201ENST00000519351 183 ntBASIC2.02□□□□□ -2.09
NXF3Q9H4D5 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.02□□□□□ -2.09
NXF3Q9H4D5 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.02□□□□□ -2.09
NXF3Q9H4D5 AC010186.2-204ENST00000537668 439 ntBASIC2.02□□□□□ -2.09
NXF3Q9H4D5 MIR5571-201ENST00000577998 113 ntBASIC2.02□□□□□ -2.09
NXF3Q9H4D5 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.02□□□□□ -2.09
NXF3Q9H4D5 AC008521.1-201ENST00000587471 187 ntBASIC2.02□□□□□ -2.09
NXF3Q9H4D5 AL022154.1-201ENST00000604698 785 ntBASIC2.02□□□□□ -2.09
NXF3Q9H4D5 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.02□□□□□ -2.09
NXF3Q9H4D5 AC069294.1-201ENST00000608397 350 ntBASIC2.02□□□□□ -2.09
NXF3Q9H4D5 AC103591.3-201ENST00000608684 209 ntBASIC2.02□□□□□ -2.09
NXF3Q9H4D5 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
NXF3Q9H4D5 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.02□□□□□ -2.09
NXF3Q9H4D5 AP000553.5-201ENST00000641933 54 ntBASIC2.02□□□□□ -2.09
NXF3Q9H4D5 RNU6-1120P-201ENST00000362988 108 ntBASIC2.01□□□□□ -2.09
NXF3Q9H4D5 RNU6-486P-201ENST00000363116 107 ntBASIC2.01□□□□□ -2.09
NXF3Q9H4D5 RNU6-623P-201ENST00000363143 105 ntBASIC2.01□□□□□ -2.09
NXF3Q9H4D5 SNORD115-7-201ENST00000365306 82 ntBASIC2.01□□□□□ -2.09
NXF3Q9H4D5 RNU6-606P-201ENST00000384721 111 ntBASIC2.01□□□□□ -2.09
NXF3Q9H4D5 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
NXF3Q9H4D5 U6atac.2-201ENST00000408644 118 ntBASIC2.01□□□□□ -2.09
NXF3Q9H4D5 RNU6-1328P-201ENST00000410938 106 ntBASIC2.01□□□□□ -2.09
NXF3Q9H4D5 AL356379.1-201ENST00000414105 126 ntBASIC2.01□□□□□ -2.09
NXF3Q9H4D5 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.01□□□□□ -2.09
NXF3Q9H4D5 MTCYBP5-201ENST00000423752 1135 ntBASIC2.01□□□□□ -2.09
NXF3Q9H4D5 AC010975.2-201ENST00000427781 588 ntBASIC2.01□□□□□ -2.09
NXF3Q9H4D5 CALM2P2-201ENST00000428512 440 ntBASIC2.01□□□□□ -2.09
NXF3Q9H4D5 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.01□□□□□ -2.09
NXF3Q9H4D5 AL161651.1-201ENST00000440882 223 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms