Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.37□□□□□ -2.03
UBQLN3Q9H347 RPS15AP11-201ENST00000594193 385 ntBASIC2.37□□□□□ -2.03
UBQLN3Q9H347 AC007621.1-201ENST00000604544 437 ntBASIC2.37□□□□□ -2.03
UBQLN3Q9H347 AC021646.1-201ENST00000605469 484 ntBASIC2.37□□□□□ -2.03
UBQLN3Q9H347 AC012557.2-201ENST00000605919 418 ntBASIC2.37□□□□□ -2.03
UBQLN3Q9H347 RNU6-6P-201ENST00000606623 107 ntBASIC2.37□□□□□ -2.03
UBQLN3Q9H347 AC064807.4-201ENST00000607201 407 ntBASIC2.37□□□□□ -2.03
UBQLN3Q9H347 RNU6-91P-201ENST00000607774 107 ntBASIC2.37□□□□□ -2.03
UBQLN3Q9H347 AC096772.1-201ENST00000609146 564 ntBASIC2.37□□□□□ -2.03
UBQLN3Q9H347 AC093788.1-201ENST00000609356 927 ntBASIC2.37□□□□□ -2.03
UBQLN3Q9H347 Z82243.1-201ENST00000609432 473 ntBASIC2.37□□□□□ -2.03
UBQLN3Q9H347 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.37□□□□□ -2.03
UBQLN3Q9H347 uc_338.34-201ENST00000617467 174 ntBASIC2.37□□□□□ -2.03
UBQLN3Q9H347 AL359880.1-201ENST00000621879 266 ntBASIC2.37□□□□□ -2.03
UBQLN3Q9H347 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
UBQLN3Q9H347 AP003400.5-201ENST00000624827 617 ntBASIC2.37□□□□□ -2.03
UBQLN3Q9H347 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.37□□□□□ -2.03
UBQLN3Q9H347 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
UBQLN3Q9H347 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
UBQLN3Q9H347 RNA5SP68-201ENST00000363885 119 ntBASIC2.36□□□□□ -2.03
UBQLN3Q9H347 SNORA69-201ENST00000383895 132 ntBASIC2.36□□□□□ -2.03
UBQLN3Q9H347 RNU6-1140P-201ENST00000410517 106 ntBASIC2.36□□□□□ -2.03
UBQLN3Q9H347 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.36□□□□□ -2.03
UBQLN3Q9H347 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
UBQLN3Q9H347 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.36□□□□□ -2.03
UBQLN3Q9H347 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.36□□□□□ -2.03
UBQLN3Q9H347 RPL7P12-201ENST00000446719 750 ntBASIC2.36□□□□□ -2.03
UBQLN3Q9H347 AC083798.1-201ENST00000472671 131 ntBASIC2.36□□□□□ -2.03
UBQLN3Q9H347 AC009646.1-201ENST00000510455 318 ntBASIC2.36□□□□□ -2.03
UBQLN3Q9H347 RNA5SP401-201ENST00000515920 127 ntBASIC2.36□□□□□ -2.03
UBQLN3Q9H347 RNU6-314P-201ENST00000516574 104 ntBASIC2.36□□□□□ -2.03
UBQLN3Q9H347 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.36□□□□□ -2.03
UBQLN3Q9H347 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.36□□□□□ -2.03
UBQLN3Q9H347 AC022880.1-201ENST00000534017 973 ntBASIC2.36□□□□□ -2.03
UBQLN3Q9H347 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.36□□□□□ -2.03
UBQLN3Q9H347 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.36□□□□□ -2.03
UBQLN3Q9H347 AL512360.1-201ENST00000555346 234 ntBASIC2.36□□□□□ -2.03
UBQLN3Q9H347 AC027807.1-201ENST00000559921 996 ntBASIC2.36□□□□□ -2.03
UBQLN3Q9H347 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.36□□□□□ -2.03
UBQLN3Q9H347 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.36□□□□□ -2.03
UBQLN3Q9H347 MIR5092-201ENST00000583139 88 ntBASIC2.36□□□□□ -2.03
UBQLN3Q9H347 AC060766.3-201ENST00000591442 263 ntBASIC2.36□□□□□ -2.03
UBQLN3Q9H347 AC002044.1-201ENST00000606707 158 ntBASIC2.36□□□□□ -2.03
UBQLN3Q9H347 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.36□□□□□ -2.03
UBQLN3Q9H347 U2.17-201ENST00000611454 95 ntBASIC2.36□□□□□ -2.03
UBQLN3Q9H347 MIR6817-201ENST00000615588 66 ntBASIC2.36□□□□□ -2.03
UBQLN3Q9H347 RMST_7.1-201ENST00000621935 268 ntBASIC2.36□□□□□ -2.03
UBQLN3Q9H347 AC099654.12-201ENST00000639868 649 ntBASIC2.36□□□□□ -2.03
UBQLN3Q9H347 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
UBQLN3Q9H347 SNORD62.1-201ENST00000362541 86 ntBASIC2.35□□□□□ -2.03
UBQLN3Q9H347 RNU6-78P-201ENST00000362897 107 ntBASIC2.35□□□□□ -2.03
UBQLN3Q9H347 SNORD56.1-201ENST00000362913 68 ntBASIC2.35□□□□□ -2.03
UBQLN3Q9H347 SNORD114-19-201ENST00000363072 75 ntBASIC2.35□□□□□ -2.03
UBQLN3Q9H347 Y_RNA.372-201ENST00000365599 102 ntBASIC2.35□□□□□ -2.03
UBQLN3Q9H347 Y_RNA.480-201ENST00000384364 102 ntBASIC2.35□□□□□ -2.03
UBQLN3Q9H347 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.35□□□□□ -2.03
UBQLN3Q9H347 USP9YP20-201ENST00000419224 558 ntBASIC2.35□□□□□ -2.03
UBQLN3Q9H347 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.35□□□□□ -2.03
UBQLN3Q9H347 AL121601.2-201ENST00000438019 707 ntBASIC2.35□□□□□ -2.03
UBQLN3Q9H347 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.35□□□□□ -2.03
UBQLN3Q9H347 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.35□□□□□ -2.03
UBQLN3Q9H347 AL139109.1-201ENST00000455491 297 ntBASIC2.35□□□□□ -2.03
UBQLN3Q9H347 AC140059.1-201ENST00000489238 361 ntBASIC2.35□□□□□ -2.03
UBQLN3Q9H347 RPL23AP49-201ENST00000492925 468 ntBASIC2.35□□□□□ -2.03
UBQLN3Q9H347 RPS27P27-201ENST00000498779 255 ntBASIC2.35□□□□□ -2.03
UBQLN3Q9H347 RNU6-506P-201ENST00000516553 94 ntBASIC2.35□□□□□ -2.03
UBQLN3Q9H347 Y_RNA.704-201ENST00000516851 102 ntBASIC2.35□□□□□ -2.03
UBQLN3Q9H347 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.35□□□□□ -2.03
UBQLN3Q9H347 AC079598.5-201ENST00000547460 117 ntBASIC2.35□□□□□ -2.03
UBQLN3Q9H347 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.35□□□□□ -2.03
UBQLN3Q9H347 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.35□□□□□ -2.03
UBQLN3Q9H347 ZNF271P-202ENST00000465539 1970 ntBASIC2.35□□□□□ -2.03
UBQLN3Q9H347 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
UBQLN3Q9H347 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
UBQLN3Q9H347 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
UBQLN3Q9H347 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
UBQLN3Q9H347 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
UBQLN3Q9H347 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
UBQLN3Q9H347 MIR6073-201ENST00000352083 89 ntBASIC2.34□□□□□ -2.03
UBQLN3Q9H347 RNU6-527P-201ENST00000363425 104 ntBASIC2.34□□□□□ -2.03
UBQLN3Q9H347 SNORA67.1-201ENST00000364749 141 ntBASIC2.34□□□□□ -2.03
UBQLN3Q9H347 RNA5SP125-201ENST00000364843 120 ntBASIC2.34□□□□□ -2.03
UBQLN3Q9H347 RNU6-780P-201ENST00000391030 104 ntBASIC2.34□□□□□ -2.03
UBQLN3Q9H347 OR9R1P-201ENST00000412200 877 ntBASIC2.34□□□□□ -2.03
UBQLN3Q9H347 AC074117.2-201ENST00000417130 397 ntBASIC2.34□□□□□ -2.03
UBQLN3Q9H347 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.34□□□□□ -2.03
UBQLN3Q9H347 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.34□□□□□ -2.03
UBQLN3Q9H347 RPS3AP44-201ENST00000425466 790 ntBASIC2.34□□□□□ -2.03
UBQLN3Q9H347 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.34□□□□□ -2.03
UBQLN3Q9H347 RNU6-261P-201ENST00000459506 102 ntBASIC2.34□□□□□ -2.03
UBQLN3Q9H347 RPL7P43-201ENST00000478876 753 ntBASIC2.34□□□□□ -2.03
UBQLN3Q9H347 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.34□□□□□ -2.03
UBQLN3Q9H347 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.34□□□□□ -2.03
UBQLN3Q9H347 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.34□□□□□ -2.03
UBQLN3Q9H347 RPL23AP94-201ENST00000512518 302 ntBASIC2.34□□□□□ -2.03
UBQLN3Q9H347 AP005902.1-201ENST00000521358 186 ntBASIC2.34□□□□□ -2.03
UBQLN3Q9H347 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.34□□□□□ -2.03
UBQLN3Q9H347 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.34□□□□□ -2.03
UBQLN3Q9H347 AC105137.2-201ENST00000569073 466 ntBASIC2.34□□□□□ -2.03
UBQLN3Q9H347 AL121917.1-203ENST00000605534 577 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms