Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 PTGES3P4-201ENST00000426243 356 ntBASIC3.93□□□□□ -1.78
CCDC113Q9H0I3 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC113Q9H0I3 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC113Q9H0I3 AC243964.1-201ENST00000441814 261 ntBASIC3.93□□□□□ -1.78
CCDC113Q9H0I3 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC113Q9H0I3 SNRPGP7-201ENST00000469016 106 ntBASIC3.93□□□□□ -1.78
CCDC113Q9H0I3 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC113Q9H0I3 RNU6-579P-201ENST00000516879 102 ntBASIC3.93□□□□□ -1.78
CCDC113Q9H0I3 SNORD19.2-201ENST00000516978 73 ntBASIC3.93□□□□□ -1.78
CCDC113Q9H0I3 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.93□□□□□ -1.78
CCDC113Q9H0I3 AC025281.1-201ENST00000567026 265 ntBASIC3.93□□□□□ -1.78
CCDC113Q9H0I3 KLKP1-201ENST00000595979 403 ntBASIC3.93□□□□□ -1.78
CCDC113Q9H0I3 AC008739.3-201ENST00000603262 127 ntBASIC3.93□□□□□ -1.78
CCDC113Q9H0I3 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
CCDC113Q9H0I3 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC113Q9H0I3 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.93□□□□□ -1.78
CCDC113Q9H0I3 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC113Q9H0I3 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC113Q9H0I3 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC113Q9H0I3 AC010680.1-201ENST00000590024 3590 ntBASIC3.92□□□□□ -1.78
CCDC113Q9H0I3 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC113Q9H0I3 RNU1-105P-201ENST00000363470 161 ntBASIC3.92□□□□□ -1.78
CCDC113Q9H0I3 RNA5SP42-201ENST00000364278 115 ntBASIC3.92□□□□□ -1.78
CCDC113Q9H0I3 RNU6-99P-201ENST00000364721 107 ntBASIC3.92□□□□□ -1.78
CCDC113Q9H0I3 MIR544A-201ENST00000384855 91 ntBASIC3.92□□□□□ -1.78
CCDC113Q9H0I3 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CCDC113Q9H0I3 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.92□□□□□ -1.78
CCDC113Q9H0I3 AC017079.2-201ENST00000416102 485 ntBASIC3.92□□□□□ -1.78
CCDC113Q9H0I3 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC113Q9H0I3 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC113Q9H0I3 RPS29P27-201ENST00000463711 170 ntBASIC3.92□□□□□ -1.78
CCDC113Q9H0I3 AC110768.1-201ENST00000509222 400 ntBASIC3.92□□□□□ -1.78
CCDC113Q9H0I3 RNU6-327P-201ENST00000516270 127 ntBASIC3.92□□□□□ -1.78
CCDC113Q9H0I3 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC113Q9H0I3 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC113Q9H0I3 SUB1P3-201ENST00000564581 315 ntBASIC3.92□□□□□ -1.78
CCDC113Q9H0I3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC113Q9H0I3 AC006077.1-201ENST00000604746 343 ntBASIC3.92□□□□□ -1.78
CCDC113Q9H0I3 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC113Q9H0I3 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC113Q9H0I3 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
CCDC113Q9H0I3 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
CCDC113Q9H0I3 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
CCDC113Q9H0I3 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.91□□□□□ -1.78
CCDC113Q9H0I3 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CCDC113Q9H0I3 Y_RNA.314-201ENST00000365114 102 ntBASIC3.91□□□□□ -1.78
CCDC113Q9H0I3 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC113Q9H0I3 AC117470.1-201ENST00000381974 330 ntBASIC3.91□□□□□ -1.78
CCDC113Q9H0I3 RNU6-843P-201ENST00000384454 104 ntBASIC3.91□□□□□ -1.78
CCDC113Q9H0I3 RNU6-700P-201ENST00000391043 107 ntBASIC3.91□□□□□ -1.78
CCDC113Q9H0I3 RNA5SP354-201ENST00000391247 136 ntBASIC3.91□□□□□ -1.78
CCDC113Q9H0I3 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CCDC113Q9H0I3 AC008267.5-201ENST00000424928 265 ntBASIC3.91□□□□□ -1.78
CCDC113Q9H0I3 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC113Q9H0I3 AC097462.2-201ENST00000504623 481 ntBASIC3.91□□□□□ -1.78
CCDC113Q9H0I3 SNORA25.10-201ENST00000515926 124 ntBASIC3.91□□□□□ -1.78
CCDC113Q9H0I3 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC113Q9H0I3 AL360085.1-201ENST00000604713 532 ntBASIC3.91□□□□□ -1.78
CCDC113Q9H0I3 U3.45-201ENST00000607547 219 ntBASIC3.91□□□□□ -1.78
CCDC113Q9H0I3 AC005014.2-201ENST00000607795 599 ntBASIC3.91□□□□□ -1.78
CCDC113Q9H0I3 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC113Q9H0I3 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC113Q9H0I3 AC010889.1-201ENST00000566193 2666 ntBASIC3.91□□□□□ -1.78
CCDC113Q9H0I3 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC113Q9H0I3 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC113Q9H0I3 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CCDC113Q9H0I3 RNU6-784P-201ENST00000384330 106 ntBASIC3.9□□□□□ -1.79
CCDC113Q9H0I3 Y_RNA.577-201ENST00000384794 101 ntBASIC3.9□□□□□ -1.79
CCDC113Q9H0I3 MIR183-201ENST00000384958 110 ntBASIC3.9□□□□□ -1.79
CCDC113Q9H0I3 MIR147B-201ENST00000390185 80 ntBASIC3.9□□□□□ -1.79
CCDC113Q9H0I3 MIR767-201ENST00000390228 109 ntBASIC3.9□□□□□ -1.79
CCDC113Q9H0I3 U3.39-201ENST00000408569 239 ntBASIC3.9□□□□□ -1.79
CCDC113Q9H0I3 AC096649.2-201ENST00000416186 393 ntBASIC3.9□□□□□ -1.79
CCDC113Q9H0I3 MCFD2P1-201ENST00000417812 300 ntBASIC3.9□□□□□ -1.79
CCDC113Q9H0I3 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.9□□□□□ -1.79
CCDC113Q9H0I3 SNORA31.23-201ENST00000517219 133 ntBASIC3.9□□□□□ -1.79
CCDC113Q9H0I3 AC007458.1-201ENST00000542812 373 ntBASIC3.9□□□□□ -1.79
CCDC113Q9H0I3 AC074050.1-201ENST00000563247 211 ntBASIC3.9□□□□□ -1.79
CCDC113Q9H0I3 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC113Q9H0I3 MIR5696-201ENST00000578474 85 ntBASIC3.9□□□□□ -1.79
CCDC113Q9H0I3 AL158827.2-201ENST00000602494 330 ntBASIC3.9□□□□□ -1.79
CCDC113Q9H0I3 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC113Q9H0I3 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC113Q9H0I3 AC009318.2-201ENST00000610917 651 ntBASIC3.9□□□□□ -1.79
CCDC113Q9H0I3 AL691447.3-201ENST00000635020 330 ntBASIC3.9□□□□□ -1.79
CCDC113Q9H0I3 U6.105-201ENST00000637379 88 ntBASIC3.9□□□□□ -1.79
CCDC113Q9H0I3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC113Q9H0I3 TNPO1P3-201ENST00000436471 2662 ntBASIC3.9□□□□□ -1.79
CCDC113Q9H0I3 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.9□□□□□ -1.79
CCDC113Q9H0I3 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.9□□□□□ -1.79
CCDC113Q9H0I3 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC113Q9H0I3 HAUS6P2-201ENST00000433254 2404 ntBASIC3.9□□□□□ -1.79
CCDC113Q9H0I3 AL356274.2-201ENST00000624379 3752 ntBASIC3.89□□□□□ -1.79
CCDC113Q9H0I3 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CCDC113Q9H0I3 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC113Q9H0I3 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC113Q9H0I3 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC113Q9H0I3 SNORD50.1-201ENST00000362987 71 ntBASIC3.89□□□□□ -1.79
CCDC113Q9H0I3 SNORA14A-201ENST00000364773 135 ntBASIC3.89□□□□□ -1.79
CCDC113Q9H0I3 RNU6-283P-201ENST00000364788 107 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms