Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.74□□□□□ -1.97
ZNF541Q9H0D2 AC107626.1-201ENST00000471084 183 ntBASIC2.74□□□□□ -1.97
ZNF541Q9H0D2 AC116655.1-201ENST00000508324 901 ntBASIC2.74□□□□□ -1.97
ZNF541Q9H0D2 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.74□□□□□ -1.97
ZNF541Q9H0D2 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.74□□□□□ -1.97
ZNF541Q9H0D2 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.74□□□□□ -1.97
ZNF541Q9H0D2 HIF1AP1-201ENST00000553642 175 ntBASIC2.74□□□□□ -1.97
ZNF541Q9H0D2 MIR4498-201ENST00000577599 66 ntBASIC2.74□□□□□ -1.97
ZNF541Q9H0D2 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.74□□□□□ -1.97
ZNF541Q9H0D2 AC020895.1-201ENST00000595362 272 ntBASIC2.74□□□□□ -1.97
ZNF541Q9H0D2 AC087045.1-201ENST00000605856 382 ntBASIC2.74□□□□□ -1.97
ZNF541Q9H0D2 AP001330.5-201ENST00000607176 411 ntBASIC2.74□□□□□ -1.97
ZNF541Q9H0D2 MIR6845-201ENST00000613182 61 ntBASIC2.74□□□□□ -1.97
ZNF541Q9H0D2 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.74□□□□□ -1.97
ZNF541Q9H0D2 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.74□□□□□ -1.97
ZNF541Q9H0D2 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
ZNF541Q9H0D2 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.74□□□□□ -1.97
ZNF541Q9H0D2 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
ZNF541Q9H0D2 SNORD3E-201ENST00000362899 217 ntBASIC2.73□□□□□ -1.97
ZNF541Q9H0D2 SNORD56.5-201ENST00000364281 72 ntBASIC2.73□□□□□ -1.97
ZNF541Q9H0D2 SNORA41-201ENST00000384675 132 ntBASIC2.73□□□□□ -1.97
ZNF541Q9H0D2 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
ZNF541Q9H0D2 EEF1A1P40-201ENST00000412883 573 ntBASIC2.73□□□□□ -1.97
ZNF541Q9H0D2 MTND3P21-201ENST00000433774 331 ntBASIC2.73□□□□□ -1.97
ZNF541Q9H0D2 AC016691.1-201ENST00000441321 413 ntBASIC2.73□□□□□ -1.97
ZNF541Q9H0D2 RPL39P40-201ENST00000445481 146 ntBASIC2.73□□□□□ -1.97
ZNF541Q9H0D2 AC007677.1-201ENST00000445757 515 ntBASIC2.73□□□□□ -1.97
ZNF541Q9H0D2 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.73□□□□□ -1.97
ZNF541Q9H0D2 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.73□□□□□ -1.97
ZNF541Q9H0D2 RNU6-261P-201ENST00000459506 102 ntBASIC2.73□□□□□ -1.97
ZNF541Q9H0D2 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.73□□□□□ -1.97
ZNF541Q9H0D2 RNU6-1281P-201ENST00000516223 105 ntBASIC2.73□□□□□ -1.97
ZNF541Q9H0D2 MIR892C-201ENST00000516410 77 ntBASIC2.73□□□□□ -1.97
ZNF541Q9H0D2 Y_RNA.693-201ENST00000516641 110 ntBASIC2.73□□□□□ -1.97
ZNF541Q9H0D2 AL137161.1-201ENST00000532231 390 ntBASIC2.73□□□□□ -1.97
ZNF541Q9H0D2 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.73□□□□□ -1.97
ZNF541Q9H0D2 EIF1P4-201ENST00000572664 335 ntBASIC2.73□□□□□ -1.97
ZNF541Q9H0D2 AC023043.2-201ENST00000589678 1026 ntBASIC2.73□□□□□ -1.97
ZNF541Q9H0D2 AC093788.1-201ENST00000609356 927 ntBASIC2.73□□□□□ -1.97
ZNF541Q9H0D2 AC011890.2-201ENST00000613393 294 ntBASIC2.73□□□□□ -1.97
ZNF541Q9H0D2 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.73□□□□□ -1.97
ZNF541Q9H0D2 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.73□□□□□ -1.97
ZNF541Q9H0D2 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
ZNF541Q9H0D2 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.72□□□□□ -1.97
ZNF541Q9H0D2 RNU4-66P-201ENST00000365199 138 ntBASIC2.72□□□□□ -1.97
ZNF541Q9H0D2 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
ZNF541Q9H0D2 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
ZNF541Q9H0D2 RPL21P75-201ENST00000396599 483 ntBASIC2.72□□□□□ -1.97
ZNF541Q9H0D2 RPL21P28-201ENST00000401418 483 ntBASIC2.72□□□□□ -1.97
ZNF541Q9H0D2 AL592114.1-201ENST00000403842 483 ntBASIC2.72□□□□□ -1.97
ZNF541Q9H0D2 USP9YP27-201ENST00000418455 438 ntBASIC2.72□□□□□ -1.97
ZNF541Q9H0D2 AL121601.2-201ENST00000438019 707 ntBASIC2.72□□□□□ -1.97
ZNF541Q9H0D2 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.72□□□□□ -1.97
ZNF541Q9H0D2 OSTCP8-201ENST00000445117 448 ntBASIC2.72□□□□□ -1.97
ZNF541Q9H0D2 PRPS1P1-201ENST00000445305 876 ntBASIC2.72□□□□□ -1.97
ZNF541Q9H0D2 AC073415.1-201ENST00000449240 153 ntBASIC2.72□□□□□ -1.97
ZNF541Q9H0D2 RPL21P39-201ENST00000463605 483 ntBASIC2.72□□□□□ -1.97
ZNF541Q9H0D2 AC083798.1-201ENST00000472671 131 ntBASIC2.72□□□□□ -1.97
ZNF541Q9H0D2 RPL21P93-201ENST00000480465 489 ntBASIC2.72□□□□□ -1.97
ZNF541Q9H0D2 AC087190.1-201ENST00000484462 480 ntBASIC2.72□□□□□ -1.97
ZNF541Q9H0D2 AC093591.1-201ENST00000491435 481 ntBASIC2.72□□□□□ -1.97
ZNF541Q9H0D2 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.72□□□□□ -1.97
ZNF541Q9H0D2 RPL21P16-201ENST00000495531 483 ntBASIC2.72□□□□□ -1.97
ZNF541Q9H0D2 SEM1P1-201ENST00000506694 209 ntBASIC2.72□□□□□ -1.97
ZNF541Q9H0D2 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.72□□□□□ -1.97
ZNF541Q9H0D2 AC113155.1-201ENST00000511141 769 ntBASIC2.72□□□□□ -1.97
ZNF541Q9H0D2 AC108729.3-201ENST00000513484 108 ntBASIC2.72□□□□□ -1.97
ZNF541Q9H0D2 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.72□□□□□ -1.97
ZNF541Q9H0D2 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.72□□□□□ -1.97
ZNF541Q9H0D2 ZNF519P2-201ENST00000557032 169 ntBASIC2.72□□□□□ -1.97
ZNF541Q9H0D2 HMGB1P33-201ENST00000563485 527 ntBASIC2.72□□□□□ -1.97
ZNF541Q9H0D2 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.72□□□□□ -1.97
ZNF541Q9H0D2 AC025165.5-201ENST00000602802 578 ntBASIC2.72□□□□□ -1.97
ZNF541Q9H0D2 AC019159.1-201ENST00000605094 187 ntBASIC2.72□□□□□ -1.97
ZNF541Q9H0D2 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.72□□□□□ -1.97
ZNF541Q9H0D2 U2.17-201ENST00000611454 95 ntBASIC2.72□□□□□ -1.97
ZNF541Q9H0D2 uc_338.34-201ENST00000617467 174 ntBASIC2.72□□□□□ -1.97
ZNF541Q9H0D2 AC026585.1-201ENST00000619582 524 ntBASIC2.72□□□□□ -1.97
ZNF541Q9H0D2 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.72□□□□□ -1.97
ZNF541Q9H0D2 MIR219B-201ENST00000637023 88 ntBASIC2.72□□□□□ -1.97
ZNF541Q9H0D2 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
ZNF541Q9H0D2 AC004520.1-201ENST00000608362 1413 ntBASIC2.72□□□□□ -1.97
ZNF541Q9H0D2 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.72□□□□□ -1.97
ZNF541Q9H0D2 Y_RNA.9-201ENST00000362354 101 ntBASIC2.71□□□□□ -1.98
ZNF541Q9H0D2 RNU4-12P-201ENST00000365233 139 ntBASIC2.71□□□□□ -1.98
ZNF541Q9H0D2 RNU6-483P-201ENST00000384088 108 ntBASIC2.71□□□□□ -1.98
ZNF541Q9H0D2 Y_RNA.516-201ENST00000384541 124 ntBASIC2.71□□□□□ -1.98
ZNF541Q9H0D2 MIR181A1-201ENST00000385026 110 ntBASIC2.71□□□□□ -1.98
ZNF541Q9H0D2 SNORA26.9-201ENST00000391322 122 ntBASIC2.71□□□□□ -1.98
ZNF541Q9H0D2 U3.37-201ENST00000408528 213 ntBASIC2.71□□□□□ -1.98
ZNF541Q9H0D2 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.71□□□□□ -1.98
ZNF541Q9H0D2 UBE2V1P10-201ENST00000414685 269 ntBASIC2.71□□□□□ -1.98
ZNF541Q9H0D2 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.71□□□□□ -1.98
ZNF541Q9H0D2 AC016831.2-201ENST00000417179 352 ntBASIC2.71□□□□□ -1.98
ZNF541Q9H0D2 PTGES3P4-201ENST00000426243 356 ntBASIC2.71□□□□□ -1.98
ZNF541Q9H0D2 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.71□□□□□ -1.98
ZNF541Q9H0D2 AL360271.2-201ENST00000447710 161 ntBASIC2.71□□□□□ -1.98
ZNF541Q9H0D2 NDUFB1P2-201ENST00000449477 176 ntBASIC2.71□□□□□ -1.98
ZNF541Q9H0D2 MTAPP1-201ENST00000489154 819 ntBASIC2.71□□□□□ -1.98
ZNF541Q9H0D2 RPL38P4-201ENST00000502376 214 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms