Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 RNU2-1-201ENST00000618664 191 ntBASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 U2.6-201ENST00000619225 191 ntBASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 U2.5-201ENST00000619465 191 ntBASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 U2.10-201ENST00000620268 191 ntBASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 AC091932.3-201ENST00000624223 323 ntBASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 ZNF355P-201ENST00000427301 3216 ntBASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
POLR1EQ9GZS1 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
POLR1EQ9GZS1 OR4G2P-201ENST00000328113 903 ntBASIC2□□□□□ -2.09
POLR1EQ9GZS1 RNU6-655P-201ENST00000362858 107 ntBASIC2□□□□□ -2.09
POLR1EQ9GZS1 RNU6-942P-201ENST00000363002 107 ntBASIC2□□□□□ -2.09
POLR1EQ9GZS1 RNY1P12-201ENST00000364251 105 ntBASIC2□□□□□ -2.09
POLR1EQ9GZS1 SNORD14B-201ENST00000364533 90 ntBASIC2□□□□□ -2.09
POLR1EQ9GZS1 MIR518A2-201ENST00000384966 87 ntBASIC2□□□□□ -2.09
POLR1EQ9GZS1 RNA5SP111-201ENST00000411386 101 ntBASIC2□□□□□ -2.09
POLR1EQ9GZS1 EEF1A1P40-201ENST00000412883 573 ntBASIC2□□□□□ -2.09
POLR1EQ9GZS1 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2□□□□□ -2.09
POLR1EQ9GZS1 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2□□□□□ -2.09
POLR1EQ9GZS1 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2□□□□□ -2.09
POLR1EQ9GZS1 AC073614.1-201ENST00000438690 650 ntBASIC2□□□□□ -2.09
POLR1EQ9GZS1 AL353689.1-201ENST00000438895 199 ntBASIC2□□□□□ -2.09
POLR1EQ9GZS1 CALM1P1-201ENST00000442082 433 ntBASIC2□□□□□ -2.09
POLR1EQ9GZS1 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2□□□□□ -2.09
POLR1EQ9GZS1 SNRPGP9-201ENST00000456025 225 ntBASIC2□□□□□ -2.09
POLR1EQ9GZS1 SNRPFP4-201ENST00000456366 242 ntBASIC2□□□□□ -2.09
POLR1EQ9GZS1 RPL38P4-201ENST00000502376 214 ntBASIC2□□□□□ -2.09
POLR1EQ9GZS1 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2□□□□□ -2.09
POLR1EQ9GZS1 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2□□□□□ -2.09
POLR1EQ9GZS1 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2□□□□□ -2.09
POLR1EQ9GZS1 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2□□□□□ -2.09
POLR1EQ9GZS1 MIR5089-201ENST00000580047 84 ntBASIC2□□□□□ -2.09
POLR1EQ9GZS1 AC243960.4-201ENST00000600532 288 ntBASIC2□□□□□ -2.09
POLR1EQ9GZS1 AC005034.5-201ENST00000604219 466 ntBASIC2□□□□□ -2.09
POLR1EQ9GZS1 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
POLR1EQ9GZS1 AC093648.1-201ENST00000623546 606 ntBASIC2□□□□□ -2.09
POLR1EQ9GZS1 AC019226.2-201ENST00000625973 424 ntBASIC2□□□□□ -2.09
POLR1EQ9GZS1 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2□□□□□ -2.09
POLR1EQ9GZS1 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
POLR1EQ9GZS1 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
POLR1EQ9GZS1 SNORD115-3-201ENST00000363100 82 ntBASIC1.99□□□□□ -2.09
POLR1EQ9GZS1 RNU6-371P-201ENST00000364283 108 ntBASIC1.99□□□□□ -2.09
POLR1EQ9GZS1 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
POLR1EQ9GZS1 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
POLR1EQ9GZS1 AL079342.1-201ENST00000401460 267 ntBASIC1.99□□□□□ -2.09
POLR1EQ9GZS1 RNA5SP450-201ENST00000411206 102 ntBASIC1.99□□□□□ -2.09
POLR1EQ9GZS1 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.99□□□□□ -2.09
POLR1EQ9GZS1 AC096920.1-201ENST00000423991 241 ntBASIC1.99□□□□□ -2.09
POLR1EQ9GZS1 HMGN2P19-201ENST00000425149 265 ntBASIC1.99□□□□□ -2.09
POLR1EQ9GZS1 AC092447.3-201ENST00000426027 686 ntBASIC1.99□□□□□ -2.09
POLR1EQ9GZS1 RPS6P15-201ENST00000431996 751 ntBASIC1.99□□□□□ -2.09
POLR1EQ9GZS1 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.99□□□□□ -2.09
POLR1EQ9GZS1 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.99□□□□□ -2.09
POLR1EQ9GZS1 AL360271.2-201ENST00000447710 161 ntBASIC1.99□□□□□ -2.09
POLR1EQ9GZS1 AC104058.1-201ENST00000448028 297 ntBASIC1.99□□□□□ -2.09
POLR1EQ9GZS1 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.99□□□□□ -2.09
POLR1EQ9GZS1 AL033528.1-201ENST00000453780 140 ntBASIC1.99□□□□□ -2.09
POLR1EQ9GZS1 AC006512.1-201ENST00000468816 291 ntBASIC1.99□□□□□ -2.09
POLR1EQ9GZS1 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.99□□□□□ -2.09
POLR1EQ9GZS1 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.99□□□□□ -2.09
POLR1EQ9GZS1 AC092436.1-201ENST00000506450 503 ntBASIC1.99□□□□□ -2.09
POLR1EQ9GZS1 AC091965.2-201ENST00000512324 613 ntBASIC1.99□□□□□ -2.09
POLR1EQ9GZS1 AP000763.2-201ENST00000540641 163 ntBASIC1.99□□□□□ -2.09
POLR1EQ9GZS1 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.99□□□□□ -2.09
POLR1EQ9GZS1 AC087883.1-201ENST00000551882 391 ntBASIC1.99□□□□□ -2.09
POLR1EQ9GZS1 AL158211.1-201ENST00000566763 763 ntBASIC1.99□□□□□ -2.09
POLR1EQ9GZS1 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.99□□□□□ -2.09
POLR1EQ9GZS1 NIFKP6-201ENST00000598115 845 ntBASIC1.99□□□□□ -2.09
POLR1EQ9GZS1 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.99□□□□□ -2.09
POLR1EQ9GZS1 AL359740.1-201ENST00000624340 592 ntBASIC1.99□□□□□ -2.09
POLR1EQ9GZS1 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
POLR1EQ9GZS1 RNU6-212P-201ENST00000362642 104 ntBASIC1.98□□□□□ -2.09
POLR1EQ9GZS1 U3.4-201ENST00000363352 213 ntBASIC1.98□□□□□ -2.09
POLR1EQ9GZS1 RNU6-384P-201ENST00000364900 104 ntBASIC1.98□□□□□ -2.09
POLR1EQ9GZS1 RNY3P10-201ENST00000384764 102 ntBASIC1.98□□□□□ -2.09
POLR1EQ9GZS1 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
POLR1EQ9GZS1 RNU6-248P-201ENST00000410720 107 ntBASIC1.98□□□□□ -2.09
POLR1EQ9GZS1 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.98□□□□□ -2.09
POLR1EQ9GZS1 AC000111.3-201ENST00000433478 193 ntBASIC1.98□□□□□ -2.09
POLR1EQ9GZS1 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
POLR1EQ9GZS1 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.98□□□□□ -2.09
POLR1EQ9GZS1 RPL23AP6-201ENST00000446637 472 ntBASIC1.98□□□□□ -2.09
POLR1EQ9GZS1 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.98□□□□□ -2.09
POLR1EQ9GZS1 RPS27AP8-201ENST00000452665 445 ntBASIC1.98□□□□□ -2.09
POLR1EQ9GZS1 SNORD42A-201ENST00000459584 64 ntBASIC1.98□□□□□ -2.09
POLR1EQ9GZS1 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.98□□□□□ -2.09
POLR1EQ9GZS1 AC116562.3-201ENST00000506136 177 ntBASIC1.98□□□□□ -2.09
POLR1EQ9GZS1 MRPS17P9-201ENST00000511924 393 ntBASIC1.98□□□□□ -2.09
POLR1EQ9GZS1 AC068587.5-201ENST00000528506 175 ntBASIC1.98□□□□□ -2.09
POLR1EQ9GZS1 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.98□□□□□ -2.09
POLR1EQ9GZS1 CLIC4P2-201ENST00000601934 717 ntBASIC1.98□□□□□ -2.09
POLR1EQ9GZS1 AP001506.1-201ENST00000615444 211 ntBASIC1.98□□□□□ -2.09
POLR1EQ9GZS1 YWHAEP7-203ENST00000622054 312 ntBASIC1.98□□□□□ -2.09
POLR1EQ9GZS1 AP000553.5-201ENST00000641933 54 ntBASIC1.98□□□□□ -2.09
POLR1EQ9GZS1 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
POLR1EQ9GZS1 FGF7P2-201ENST00000332473 296 ntBASIC1.97□□□□□ -2.09
POLR1EQ9GZS1 RNU6-179P-201ENST00000363350 107 ntBASIC1.97□□□□□ -2.09
POLR1EQ9GZS1 RNU6-529P-201ENST00000363383 104 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms